RNA–Protein interactions for RNA: ENSMUST00000040964.12

Ss18-202, Transcript of Protein SSXT, mousemouse

TSL 1 (best) BASIC

Gene Ss18, Length 4,153 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18-202ENSMUST00000040964 NischQ80TM9 1593 aa22.34■■□□□ 1.17
Ss18-202ENSMUST00000040964 Gm35339A0A140LHH9 1649 aa21.99■■□□□ 1.11
Ss18-202ENSMUST00000040964 Abcc9P70170 1546 aa21.59■■□□□ 1.05
Ss18-202ENSMUST00000040964 Abcc8B2RUS7 1588 aa21.22■□□□□ 0.99
Ss18-202ENSMUST00000040964 Rhox8Q6VSS7 320 aa20.71■□□□□ 0.91
Ss18-202ENSMUST00000040964 Dcaf1Q80TR8 1506 aa20.04■□□□□ 0.8
Ss18-202ENSMUST00000040964 Rtl1Q7M732 1744 aa19.94■□□□□ 0.78
Ss18-202ENSMUST00000040964 NacadQ5SWP3 1504 aa19.79■□□□□ 0.76
Ss18-202ENSMUST00000040964 ScribQ80U72 1612 aa19.67■□□□□ 0.74
Ss18-202ENSMUST00000040964 Rb1cc1Q9ESK9 1588 aa19.55■□□□□ 0.72
Ss18-202ENSMUST00000040964 Kdm5dQ62240 1548 aa19.52■□□□□ 0.72
Ss18-202ENSMUST00000040964 Ccdc180J3QNE4 1664 aa19.47■□□□□ 0.71
Ss18-202ENSMUST00000040964 Baz1aO88379 1555 aa19.38■□□□□ 0.69
Ss18-202ENSMUST00000040964 Crybg2B7ZCC2 1516 aa19.31■□□□□ 0.68
Ss18-202ENSMUST00000040964 Sycp2Q9CUU3 1500 aa19.18■□□□□ 0.66
Ss18-202ENSMUST00000040964 Zcchc6Q5BLK4 1491 aaKnown RBP19.16■□□□□ 0.66
Ss18-202ENSMUST00000040964 Trim41Q5NCC3 630 aa19.14■□□□□ 0.65
Ss18-202ENSMUST00000040964 Ccdc136Q3TVA9 1136 aa18.92■□□□□ 0.62
Ss18-202ENSMUST00000040964 Brd4Q9ESU6 1400 aaKnown RBP18.78■□□□□ 0.6
Ss18-202ENSMUST00000040964 Smarca2Q6DIC0 1577 aa18.72■□□□□ 0.59
Ss18-202ENSMUST00000040964 HrcG5E8J6 738 aa18.66■□□□□ 0.58
Ss18-202ENSMUST00000040964 Esf1Q3V1V3 845 aaKnown RBP18.63■□□□□ 0.57
Ss18-202ENSMUST00000040964 Pds5bQ4VA53 1446 aaKnown RBP18.52■□□□□ 0.56
Ss18-202ENSMUST00000040964 Cngb1E1AZ71 1325 aa18.43■□□□□ 0.54
Ss18-202ENSMUST00000040964 BicraF8VPZ9 1578 aa18.41■□□□□ 0.54
Ss18-202ENSMUST00000040964 Smarca4Q3TKT4 1613 aaKnown RBP18.35■□□□□ 0.53
Ss18-202ENSMUST00000040964 Atad2bE9Q166 1460 aaKnown RBP18.33■□□□□ 0.52
Ss18-202ENSMUST00000040964 Ercc6F8VPZ5 1481 aa18.26■□□□□ 0.51
Ss18-202ENSMUST00000040964 Cttnbp2B9EJA2 1648 aa18.21■□□□□ 0.51
Ss18-202ENSMUST00000040964 Golga3P55937 1487 aa18.19■□□□□ 0.5
Ss18-202ENSMUST00000040964 CftrP26361 1476 aa18.19■□□□□ 0.5
Ss18-202ENSMUST00000040964 Cecr2E9Q2Z1 1453 aa18.18■□□□□ 0.5
Ss18-202ENSMUST00000040964 Synj1Q8CHC4 1574 aa18.08■□□□□ 0.48
Ss18-202ENSMUST00000040964 Iqgap2Q3UQ44 1575 aa18.08■□□□□ 0.48
Ss18-202ENSMUST00000040964 Cep164Q5DU05 1446 aa18.07■□□□□ 0.48
Ss18-202ENSMUST00000040964 Rsf1E9PWW9 1441 aaKnown RBP17.93■□□□□ 0.46
Ss18-202ENSMUST00000040964 Fmn1Q05860 1466 aa17.88■□□□□ 0.45
Ss18-202ENSMUST00000040964 Rpgrip1Q9EPQ2 1331 aa17.85■□□□□ 0.45
Ss18-202ENSMUST00000040964 Baz1bQ9Z277 1479 aa17.85■□□□□ 0.45
Ss18-202ENSMUST00000040964 Phldb1Q6PDH0 1371 aaKnown RBP17.82■□□□□ 0.44
Ss18-202ENSMUST00000040964 Npm2Q80W85 207 aa17.8■□□□□ 0.44
Ss18-202ENSMUST00000040964 Wdr62Q3U3T8 1523 aa17.75■□□□□ 0.43
Ss18-202ENSMUST00000040964 Gab3Q8BSM5 595 aa17.74■□□□□ 0.43
Ss18-202ENSMUST00000040964 Ubl4bQ9CQ84 188 aa17.72■□□□□ 0.43
Ss18-202ENSMUST00000040964 Npm1Q61937 292 aaKnown RBP17.72■□□□□ 0.43
Ss18-202ENSMUST00000040964 Ccdc18Q640L5 1455 aa17.71■□□□□ 0.43
Ss18-202ENSMUST00000040964 Kif15Q6P9L6 1387 aa17.7■□□□□ 0.42
Ss18-202ENSMUST00000040964 Top2bQ64511 1612 aa17.69■□□□□ 0.42
Ss18-202ENSMUST00000040964 Frmpd1A2AKB4 1549 aa17.68■□□□□ 0.42
Ss18-202ENSMUST00000040964 Zeb1Q64318 1117 aa17.61■□□□□ 0.41
Ss18-202ENSMUST00000040964 Chic1Q8CBW7 227 aa17.59■□□□□ 0.41
Ss18-202ENSMUST00000040964 Il27Q8K3I6 234 aa17.57■□□□□ 0.4
Ss18-202ENSMUST00000040964 Ccdc88bQ4QRL3 1481 aa17.52■□□□□ 0.4
Ss18-202ENSMUST00000040964 Thoc2B1AZI6 1594 aaKnown RBP17.52■□□□□ 0.39
Ss18-202ENSMUST00000040964 Lamc3Q9R0B6 1581 aa17.48■□□□□ 0.39
Ss18-202ENSMUST00000040964 Fam135aQ6NS59 1506 aa17.46■□□□□ 0.39
Ss18-202ENSMUST00000040964 Top2aQ01320 1528 aaKnown RBP17.43■□□□□ 0.38
Ss18-202ENSMUST00000040964 Cc2d2aQ8CFW7 1633 aa17.43■□□□□ 0.38
Ss18-202ENSMUST00000040964 Myt1lP97500 1187 aa17.42■□□□□ 0.38
Ss18-202ENSMUST00000040964 Cux2P70298 1426 aa17.41■□□□□ 0.38
Ss18-202ENSMUST00000040964 TnnQ80Z71 1560 aa17.36■□□□□ 0.37
Ss18-202ENSMUST00000040964 Rapgef2Q8CHG7 1496 aa17.29■□□□□ 0.36
Ss18-202ENSMUST00000040964 NrkQ9R0G8 1455 aa17.29■□□□□ 0.36
Ss18-202ENSMUST00000040964 Mrc2Q64449 1479 aa17.27■□□□□ 0.36
Ss18-202ENSMUST00000040964 LrpprcQ6PB66 1392 aaKnown RBP17.25■□□□□ 0.35
Ss18-202ENSMUST00000040964 Camsap1A2AHC3 1581 aa17.23■□□□□ 0.35
Ss18-202ENSMUST00000040964 Cep162Q6ZQ06 1403 aa17.23■□□□□ 0.35
Ss18-202ENSMUST00000040964 Acin1Q9JIX8 1338 aaKnown RBP17.22■□□□□ 0.35
Ss18-202ENSMUST00000040964 Efcab5A0JP43 1406 aa17.22■□□□□ 0.35
Ss18-202ENSMUST00000040964 Shroom4Q1W617 1475 aa17.19■□□□□ 0.34
Ss18-202ENSMUST00000040964 Clip1Q922J3 1391 aa17.17■□□□□ 0.34
Ss18-202ENSMUST00000040964 Grin2bQ01097 1482 aa17.15■□□□□ 0.34
Ss18-202ENSMUST00000040964 Map3k1P53349 1493 aa17.14■□□□□ 0.33
Ss18-202ENSMUST00000040964 PogzQ8BZH4 1409 aaKnown RBP17.11■□□□□ 0.33
Ss18-202ENSMUST00000040964 Dhx29Q6PGC1 1365 aaKnown RBP17.1■□□□□ 0.33
Ss18-202ENSMUST00000040964 Eea1Q8BL66 1411 aa17.1■□□□□ 0.33
Ss18-202ENSMUST00000040964 Rpap1Q80TE0 1409 aa17.08■□□□□ 0.32
Ss18-202ENSMUST00000040964 Ehmt2Q9Z148 1263 aaKnown RBP17.08■□□□□ 0.32
Ss18-202ENSMUST00000040964 NefmP08553 848 aa17.07■□□□□ 0.32
Ss18-202ENSMUST00000040964 Carmil1Q6EDY6 1374 aa17.06■□□□□ 0.32
Ss18-202ENSMUST00000040964 Unc13aQ4KUS2 1712 aa17.06■□□□□ 0.32
Ss18-202ENSMUST00000040964 Polr1aO35134 1717 aaKnown RBP17.02■□□□□ 0.31
Ss18-202ENSMUST00000040964 Duox2A2AQ99 1517 aa17.01■□□□□ 0.31
Ss18-202ENSMUST00000040964 Setd5Q5XJV7 1441 aa17■□□□□ 0.31
Ss18-202ENSMUST00000040964 AqrQ8CFQ3 1481 aaKnown RBP17■□□□□ 0.31
Ss18-202ENSMUST00000040964 Crocc2F6XLV1 1638 aa16.96■□□□□ 0.3
Ss18-202ENSMUST00000040964 Mroh2bQ7M6Y6 1581 aa16.93■□□□□ 0.3
Ss18-202ENSMUST00000040964 Ift140E9PY46 1464 aa16.93■□□□□ 0.3
Ss18-202ENSMUST00000040964 Arhgap35Q91YM2 1499 aa16.92■□□□□ 0.3
Ss18-202ENSMUST00000040964 UbtfP25976 765 aaKnown RBP16.91■□□□□ 0.3
Ss18-202ENSMUST00000040964 Fyco1Q8VDC1 1437 aa16.88■□□□□ 0.29
Ss18-202ENSMUST00000040964 SynmQ70IV5 1561 aa16.84■□□□□ 0.29
Ss18-202ENSMUST00000040964 CntlnA2AM05 1397 aa16.84■□□□□ 0.29
Ss18-202ENSMUST00000040964 Cc2d2bA0A286YDU8 1405 aa16.8■□□□□ 0.28
Ss18-202ENSMUST00000040964 Urb2E9Q7L1 1524 aaKnown RBP16.8■□□□□ 0.28
Ss18-202ENSMUST00000040964 Las1lA2BE28 776 aaKnown RBP16.8■□□□□ 0.28
Ss18-202ENSMUST00000040964 PtprkP35822 1457 aa16.8■□□□□ 0.28
Ss18-202ENSMUST00000040964 Ap3b1Q9Z1T1 1105 aa16.79■□□□□ 0.28
Ss18-202ENSMUST00000040964 Pbrm1Q8BSQ9 1634 aaKnown RBP16.78■□□□□ 0.28
Ss18-202ENSMUST00000040964 Kif21aQ9QXL2 1672 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 144.1 ms