RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Eea1Q8BL66 1411 aa27.74■■■□□ 2.03
Ccdc50-201ENSMUST00000039443 Duox2A2AQ99 1517 aa27.69■■■□□ 2.02
Ccdc50-201ENSMUST00000039443 Myt1Q8CFC2 1127 aa27.69■■■□□ 2.02
Ccdc50-201ENSMUST00000039443 Urb2E9Q7L1 1524 aaKnown RBP27.67■■■□□ 2.02
Ccdc50-201ENSMUST00000039443 Plb1Q3TTY0 1478 aa27.66■■■□□ 2.02
Ccdc50-201ENSMUST00000039443 Arap1Q4LDD4 1452 aa27.65■■■□□ 2.02
Ccdc50-201ENSMUST00000039443 Arhgef5E9Q7D5 1581 aa27.65■■■□□ 2.02
Ccdc50-201ENSMUST00000039443 CenpbP27790 599 aa27.63■■■□□ 2.01
Ccdc50-201ENSMUST00000039443 Kdm5bQ80Y84 1544 aa27.63■■■□□ 2.01
Ccdc50-201ENSMUST00000039443 Map3k1P53349 1493 aa27.63■■■□□ 2.01
Ccdc50-201ENSMUST00000039443 Efcab5A0JP43 1406 aa27.62■■■□□ 2.01
Ccdc50-201ENSMUST00000039443 TchhA0A0B4J1F9 1599 aa27.58■■■□□ 2.01
Ccdc50-201ENSMUST00000039443 Shroom4Q1W617 1475 aa27.55■■■□□ 2
Ccdc50-201ENSMUST00000039443 PtprkP35822 1457 aa27.55■■■□□ 2
Ccdc50-201ENSMUST00000039443 Ppargc1bQ8VHJ7 1014 aa27.52■■■□□ 2
Ccdc50-201ENSMUST00000039443 Eif4g3Q80XI3 1579 aaKnown RBP27.51■■■□□ 2
Ccdc50-201ENSMUST00000039443 Setd5Q5XJV7 1441 aa27.49■■□□□ 1.99
Ccdc50-201ENSMUST00000039443 Tiam1Q60610 1591 aa27.49■■□□□ 1.99
Ccdc50-201ENSMUST00000039443 Ift140E9PY46 1464 aa27.48■■□□□ 1.99
Ccdc50-201ENSMUST00000039443 Samd9lQ69Z37 1561 aa27.47■■□□□ 1.99
Ccdc50-201ENSMUST00000039443 Erich3F6QRE9 1637 aa27.43■■□□□ 1.98
Ccdc50-201ENSMUST00000039443 Tnnt3Q9QZ47 272 aa27.4■■□□□ 1.98
Ccdc50-201ENSMUST00000039443 Disp1Q3TDN0 1521 aa27.36■■□□□ 1.97
Ccdc50-201ENSMUST00000039443 Pbrm1Q8BSQ9 1634 aaKnown RBP27.29■■□□□ 1.96
Ccdc50-201ENSMUST00000039443 AqrQ8CFQ3 1481 aaKnown RBP27.29■■□□□ 1.96
Ccdc50-201ENSMUST00000039443 Mroh2bQ7M6Y6 1581 aa27.29■■□□□ 1.96
Ccdc50-201ENSMUST00000039443 Naip1Q9QWK5 1403 aa27.28■■□□□ 1.96
Ccdc50-201ENSMUST00000039443 Rad54l2Q99NG0 1466 aa27.26■■□□□ 1.95
Ccdc50-201ENSMUST00000039443 Ankrd26Q811D2 1581 aa27.26■■□□□ 1.95
Ccdc50-201ENSMUST00000039443 Rusc2Q80U22 1514 aa27.25■■□□□ 1.95
Ccdc50-201ENSMUST00000039443 SynmQ70IV5 1561 aa27.24■■□□□ 1.95
Ccdc50-201ENSMUST00000039443 Nup160Q9Z0W3 1402 aaKnown RBP27.24■■□□□ 1.95
Ccdc50-201ENSMUST00000039443 Ap3b1Q9Z1T1 1105 aa27.23■■□□□ 1.95
Ccdc50-201ENSMUST00000039443 Eid3Q3V124 375 aa27.22■■□□□ 1.95
Ccdc50-201ENSMUST00000039443 Setd1bQ8CFT2 1985 aa27.2■■□□□ 1.94
Ccdc50-201ENSMUST00000039443 Magi3Q9EQJ9 1476 aa27.2■■□□□ 1.94
Ccdc50-201ENSMUST00000039443 BlmO88700 1416 aa27.19■■□□□ 1.94
Ccdc50-201ENSMUST00000039443 Grin2aP35436 1464 aa27.18■■□□□ 1.94
Ccdc50-201ENSMUST00000039443 Pcf11G3X9Z4 1553 aa27.17■■□□□ 1.94
Ccdc50-201ENSMUST00000039443 Cc2d2bA0A286YDU8 1405 aa27.16■■□□□ 1.94
Ccdc50-201ENSMUST00000039443 UacaQ8CGB3 1411 aa27.15■■□□□ 1.94
Ccdc50-201ENSMUST00000039443 Stra8P70278 393 aa27.14■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 Slx4Q6P1D7 1565 aa27.13■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 Gpatch8A2A6A1 1505 aa27.12■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 Lmo7E9PYF4 1699 aaKnown RBP27.12■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 Ankrd36D3Z4K0 1415 aa27.1■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 Ccer2J3QPU5 274 aa27.1■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 Pla2r1Q62028 1487 aa27.1■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 CntlnA2AM05 1397 aa27.09■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 Peg3Q3URU2 1571 aa27.08■■□□□ 1.93
Ccdc50-201ENSMUST00000039443 Fhad1A6PWD2 1420 aa27.04■■□□□ 1.92
Ccdc50-201ENSMUST00000039443 Mia2Q91ZV0 1396 aa27.04■■□□□ 1.92
Ccdc50-201ENSMUST00000039443 Rpap1Q80TE0 1409 aa27.03■■□□□ 1.92
Ccdc50-201ENSMUST00000039443 Hnrnpul2Q00PI9 745 aaKnown RBP27.01■■□□□ 1.91
Ccdc50-201ENSMUST00000039443 Carmil1Q6EDY6 1374 aa26.99■■□□□ 1.91
Ccdc50-201ENSMUST00000039443 Fyco1Q8VDC1 1437 aa26.99■■□□□ 1.91
Ccdc50-201ENSMUST00000039443 Gm38655A0A286YDK6 273 aa26.96■■□□□ 1.91
Ccdc50-201ENSMUST00000039443 NclP09405 707 aaKnown RBP26.96■■□□□ 1.91
Ccdc50-201ENSMUST00000039443 Camsap2Q8C1B1 1461 aa26.95■■□□□ 1.91
Ccdc50-201ENSMUST00000039443 Vps8Q0P5W1 1427 aa26.95■■□□□ 1.9
Ccdc50-201ENSMUST00000039443 Gm13697A2AK42 830 aa26.94■■□□□ 1.9
Ccdc50-201ENSMUST00000039443 Fam50aQ9WV03 339 aaKnown RBP26.92■■□□□ 1.9
Ccdc50-201ENSMUST00000039443 Cux1P53564 1515 aa26.9■■□□□ 1.9
Ccdc50-201ENSMUST00000039443 3425401B19RikD3Z1D3 1412 aa26.9■■□□□ 1.9
Ccdc50-201ENSMUST00000039443 EprsQ8CGC7 1512 aaKnown RBP26.88■■□□□ 1.89
Ccdc50-201ENSMUST00000039443 Znf710Q3U288 666 aa26.86■■□□□ 1.89
Ccdc50-201ENSMUST00000039443 Shroom2A2ALU4 1481 aa26.85■■□□□ 1.89
Ccdc50-201ENSMUST00000039443 Adamts12Q811B3 1600 aa26.84■■□□□ 1.89
Ccdc50-201ENSMUST00000039443 Polr1aO35134 1717 aaKnown RBP26.82■■□□□ 1.88
Ccdc50-201ENSMUST00000039443 WizO88286 1684 aaKnown RBP26.8■■□□□ 1.88
Ccdc50-201ENSMUST00000039443 Naip2Q9QUK4 1447 aa26.79■■□□□ 1.88
Ccdc50-201ENSMUST00000039443 Abca16E9PWJ7 1678 aa26.77■■□□□ 1.88
Ccdc50-201ENSMUST00000039443 Fgd6Q69ZL1 1399 aa26.77■■□□□ 1.88
Ccdc50-201ENSMUST00000039443 SafbD3YXK2 937 aaKnown RBP26.75■■□□□ 1.87
Ccdc50-201ENSMUST00000039443 Lmod2Q3UHZ5 550 aa26.73■■□□□ 1.87
Ccdc50-201ENSMUST00000039443 PxdnQ3UQ28 1475 aa26.72■■□□□ 1.87
Ccdc50-201ENSMUST00000039443 Hspa5P20029 655 aaKnown RBP26.71■■□□□ 1.87
Ccdc50-201ENSMUST00000039443 Cul7Q8VE73 1689 aa26.71■■□□□ 1.87
Ccdc50-201ENSMUST00000039443 Fam71e1A1L3C1 212 aa26.71■■□□□ 1.87
Ccdc50-201ENSMUST00000039443 CadpsQ80TJ1 1355 aa26.71■■□□□ 1.87
Ccdc50-201ENSMUST00000039443 Anp32aO35381 247 aa26.7■■□□□ 1.87
Ccdc50-201ENSMUST00000039443 Gm1043A0A140LJC2 1431 aa26.7■■□□□ 1.86
Ccdc50-201ENSMUST00000039443 Gm7298A0A0N4SVU1 1476 aa26.69■■□□□ 1.86
Ccdc50-201ENSMUST00000039443 Abcc2Q8VI47 1543 aa26.69■■□□□ 1.86
Ccdc50-201ENSMUST00000039443 Fhod3Q76LL6 1578 aa26.67■■□□□ 1.86
Ccdc50-201ENSMUST00000039443 Ncoa2Q61026 1462 aa26.67■■□□□ 1.86
Ccdc50-201ENSMUST00000039443 Pabpn1Q8CCS6 302 aaKnown RBP26.66■■□□□ 1.86
Ccdc50-201ENSMUST00000039443 Mapk8ip2Q9ERE9 830 aa26.66■■□□□ 1.86
Ccdc50-201ENSMUST00000039443 Aebp1Q640N1 1128 aa26.64■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 Arhgap27A2AB59 869 aa26.62■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 Soga1E1U8D0 1418 aa26.62■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 Dnmt1P13864 1620 aaKnown RBP26.62■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 Naip5Q9R016 1403 aa26.61■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 Map3k4O08648 1597 aa26.61■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 Smg6P61406 1418 aaKnown RBP26.61■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 Abca5Q8K448 1642 aa26.61■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 A2mQ6GQT1 1474 aa26.59■■□□□ 1.85
Ccdc50-201ENSMUST00000039443 AknaQ80VW7 1404 aa26.56■■□□□ 1.84
Ccdc50-201ENSMUST00000039443 Lmtk2Q3TYD6 1471 aa26.54■■□□□ 1.84
Ccdc50-201ENSMUST00000039443 Pelp1Q9DBD5 1123 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms