RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 TonslQ6NZL6 1363 aa14.79□□□□□ -0.04
Limch1-201ENSMUST00000038188 Smarca4Q3TKT4 1613 aaKnown RBP14.77□□□□□ -0.04
Limch1-201ENSMUST00000038188 Eid3Q3V124 375 aa14.77□□□□□ -0.04
Limch1-201ENSMUST00000038188 Cyb5rlB1AS42 316 aa14.77□□□□□ -0.05
Limch1-201ENSMUST00000038188 Pip4k2bQ80XI4 416 aa14.77□□□□□ -0.05
Limch1-201ENSMUST00000038188 Kdm2aP59997 1161 aa14.74□□□□□ -0.05
Limch1-201ENSMUST00000038188 IqubQ8CDK3 788 aa14.73□□□□□ -0.05
Limch1-201ENSMUST00000038188 Eif5bQ05D44 1216 aaKnown RBP14.73□□□□□ -0.05
Limch1-201ENSMUST00000038188 Mier1Q5UAK0 511 aa14.72□□□□□ -0.05
Limch1-201ENSMUST00000038188 Dhx29Q6PGC1 1365 aaKnown RBP14.71□□□□□ -0.05
Limch1-201ENSMUST00000038188 Soga1E1U8D0 1418 aa14.71□□□□□ -0.05
Limch1-201ENSMUST00000038188 Ubap1lG3UW59 384 aa14.71□□□□□ -0.06
Limch1-201ENSMUST00000038188 Baz1bQ9Z277 1479 aa14.7□□□□□ -0.06
Limch1-201ENSMUST00000038188 Polr3glQ8R0C0 218 aa14.69□□□□□ -0.06
Limch1-201ENSMUST00000038188 Kif27Q7M6Z4 1394 aa14.69□□□□□ -0.06
Limch1-201ENSMUST00000038188 Srpk2O54781 681 aaKnown RBP14.69□□□□□ -0.06
Limch1-201ENSMUST00000038188 Txndc2Q6P902 515 aa14.69□□□□□ -0.06
Limch1-201ENSMUST00000038188 Iqgap2Q3UQ44 1575 aa14.69□□□□□ -0.06
Limch1-201ENSMUST00000038188 Psme1P97371 249 aa14.69□□□□□ -0.06
Limch1-201ENSMUST00000038188 Acin1Q9JIX8 1338 aaKnown RBP14.68□□□□□ -0.06
Limch1-201ENSMUST00000038188 Mtus2Q3UHD3 1353 aa14.67□□□□□ -0.06
Limch1-201ENSMUST00000038188 Irx6Q9ER75 438 aa14.67□□□□□ -0.06
Limch1-201ENSMUST00000038188 Mroh3A0A1D5RM54 893 aa14.64□□□□□ -0.07
Limch1-201ENSMUST00000038188 LrpprcQ6PB66 1392 aaKnown RBP14.64□□□□□ -0.07
Limch1-201ENSMUST00000038188 Urb2E9Q7L1 1524 aaKnown RBP14.63□□□□□ -0.07
Limch1-201ENSMUST00000038188 Rangap1P46061 589 aaKnown RBP14.62□□□□□ -0.07
Limch1-201ENSMUST00000038188 Rgl3Q3UYI5 709 aa14.62□□□□□ -0.07
Limch1-201ENSMUST00000038188 Mrc2Q64449 1479 aa14.62□□□□□ -0.07
Limch1-201ENSMUST00000038188 CftrP26361 1476 aa14.61□□□□□ -0.07
Limch1-201ENSMUST00000038188 Grwd1Q810D6 446 aaKnown RBP14.61□□□□□ -0.07
Limch1-201ENSMUST00000038188 NeflP08551 543 aa14.6□□□□□ -0.07
Limch1-201ENSMUST00000038188 Smarca2Q6DIC0 1577 aa14.6□□□□□ -0.07
Limch1-201ENSMUST00000038188 Gm20521D3Z5F7 333 aa14.6□□□□□ -0.07
Limch1-201ENSMUST00000038188 Shroom4Q1W617 1475 aa14.59□□□□□ -0.07
Limch1-201ENSMUST00000038188 Fbln2P37889 1221 aa14.59□□□□□ -0.07
Limch1-201ENSMUST00000038188 Exosc9Q9JHI7 438 aaKnown RBP14.59□□□□□ -0.07
Limch1-201ENSMUST00000038188 Eea1Q8BL66 1411 aa14.58□□□□□ -0.08
Limch1-201ENSMUST00000038188 Q8BT18 775 aa14.58□□□□□ -0.08
Limch1-201ENSMUST00000038188 Stag3O70576 1240 aa14.57□□□□□ -0.08
Limch1-201ENSMUST00000038188 Sox12Q04890 314 aa14.56□□□□□ -0.08
Limch1-201ENSMUST00000038188 Fmn1Q05860 1466 aa14.56□□□□□ -0.08
Limch1-201ENSMUST00000038188 Ccer2J3QPU5 274 aa14.55□□□□□ -0.08
Limch1-201ENSMUST00000038188 Aplp2Q06335 707 aa14.54□□□□□ -0.08
Limch1-201ENSMUST00000038188 Ppm1fQ8CGA0 452 aa14.54□□□□□ -0.08
Limch1-201ENSMUST00000038188 Kif3bQ61771 747 aa14.54□□□□□ -0.08
Limch1-201ENSMUST00000038188 Aebp1Q640N1 1128 aa14.53□□□□□ -0.08
Limch1-201ENSMUST00000038188 Mapk8ip2Q9ERE9 830 aa14.52□□□□□ -0.08
Limch1-201ENSMUST00000038188 Stk26Q99JT2 416 aa14.52□□□□□ -0.09
Limch1-201ENSMUST00000038188 Synj1Q8CHC4 1574 aa14.52□□□□□ -0.09
Limch1-201ENSMUST00000038188 Crybg2B7ZCC2 1516 aa14.49□□□□□ -0.09
Limch1-201ENSMUST00000038188 Cc2d2aQ8CFW7 1633 aa14.47□□□□□ -0.09
Limch1-201ENSMUST00000038188 Jph4Q80WT0 628 aa14.47□□□□□ -0.09
Limch1-201ENSMUST00000038188 Rsph4aQ8BYM7 716 aa14.45□□□□□ -0.1
Limch1-201ENSMUST00000038188 HdgfP51859 237 aaKnown RBP14.42□□□□□ -0.1
Limch1-201ENSMUST00000038188 Dhx57Q6P5D3 1388 aaKnown RBP14.42□□□□□ -0.1
Limch1-201ENSMUST00000038188 Map4P27546 1125 aaKnown RBP14.41□□□□□ -0.1
Limch1-201ENSMUST00000038188 Cttnbp2B9EJA2 1648 aa14.41□□□□□ -0.1
Limch1-201ENSMUST00000038188 Rtn4Q99P72 1162 aaKnown RBP14.4□□□□□ -0.1
Limch1-201ENSMUST00000038188 WrnO09053 1401 aa14.4□□□□□ -0.1
Limch1-201ENSMUST00000038188 Cnga1P29974 684 aa14.4□□□□□ -0.1
Limch1-201ENSMUST00000038188 Sart1Q9Z315 806 aaKnown RBP14.4□□□□□ -0.1
Limch1-201ENSMUST00000038188 Znf316Q6PGE4 1016 aa14.38□□□□□ -0.11
Limch1-201ENSMUST00000038188 Fgd6Q69ZL1 1399 aa14.37□□□□□ -0.11
Limch1-201ENSMUST00000038188 Carmil1Q6EDY6 1374 aa14.33□□□□□ -0.11
Limch1-201ENSMUST00000038188 Ciz1Q8VEH2 845 aa14.33□□□□□ -0.12
Limch1-201ENSMUST00000038188 Rad54l2Q99NG0 1466 aa14.33□□□□□ -0.12
Limch1-201ENSMUST00000038188 Ccdc88bQ4QRL3 1481 aa14.33□□□□□ -0.12
Limch1-201ENSMUST00000038188 Frmpd1A2AKB4 1549 aa14.31□□□□□ -0.12
Limch1-201ENSMUST00000038188 Chrna2Q91X60 512 aa14.3□□□□□ -0.12
Limch1-201ENSMUST00000038188 Trim26Q99PN3 545 aa14.27□□□□□ -0.13
Limch1-201ENSMUST00000038188 Plb1Q3TTY0 1478 aa14.26□□□□□ -0.13
Limch1-201ENSMUST00000038188 Pak3Q61036 559 aa14.26□□□□□ -0.13
Limch1-201ENSMUST00000038188 Cabp1Q9JLK7 227 aa14.26□□□□□ -0.13
Limch1-201ENSMUST00000038188 Atf3Q60765 181 aa14.25□□□□□ -0.13
Limch1-201ENSMUST00000038188 Rad21Q61550 635 aaKnown RBP14.25□□□□□ -0.13
Limch1-201ENSMUST00000038188 Ap3b2Q9JME5 1082 aa14.25□□□□□ -0.13
Limch1-201ENSMUST00000038188 Card11Q8CIS0 1159 aa14.23□□□□□ -0.13
Limch1-201ENSMUST00000038188 Ncoa2Q61026 1462 aa14.23□□□□□ -0.13
Limch1-201ENSMUST00000038188 Dmrt2Q8BG36 561 aa14.22□□□□□ -0.13
Limch1-201ENSMUST00000038188 Evi5lH3BKQ3 813 aa14.22□□□□□ -0.13
Limch1-201ENSMUST00000038188 Ifit1bl1D3Z6F0 470 aa14.21□□□□□ -0.13
Limch1-201ENSMUST00000038188 Fgd1P52734 960 aa14.21□□□□□ -0.13
Limch1-201ENSMUST00000038188 CadpsQ80TJ1 1355 aa14.21□□□□□ -0.13
Limch1-201ENSMUST00000038188 Cep162Q6ZQ06 1403 aa14.21□□□□□ -0.14
Limch1-201ENSMUST00000038188 Trak1Q6PD31 939 aa14.21□□□□□ -0.14
Limch1-201ENSMUST00000038188 Gm14025A2AP89 1413 aa14.21□□□□□ -0.14
Limch1-201ENSMUST00000038188 Ift140E9PY46 1464 aa14.2□□□□□ -0.14
Limch1-201ENSMUST00000038188 Kif7B7ZNG0 1348 aa14.2□□□□□ -0.14
Limch1-201ENSMUST00000038188 Duox2A2AQ99 1517 aa14.19□□□□□ -0.14
Limch1-201ENSMUST00000038188 Utp14aQ640M1 767 aaKnown RBP14.19□□□□□ -0.14
Limch1-201ENSMUST00000038188 Plin1Q8CGN5 517 aa14.19□□□□□ -0.14
Limch1-201ENSMUST00000038188 Sf3b2Q3UJB0 878 aaKnown RBP14.18□□□□□ -0.14
Limch1-201ENSMUST00000038188 Ythdc1E9Q5K9 736 aaKnown RBP14.18□□□□□ -0.14
Limch1-201ENSMUST00000038188 Cc2d2bA0A286YDU8 1405 aa14.17□□□□□ -0.14
Limch1-201ENSMUST00000038188 PtprkP35822 1457 aa14.17□□□□□ -0.14
Limch1-201ENSMUST00000038188 Sugp2Q8CH09 1067 aa14.17□□□□□ -0.14
Limch1-201ENSMUST00000038188 Fyco1Q8VDC1 1437 aa14.17□□□□□ -0.14
Limch1-201ENSMUST00000038188 Shq1Q7TMX5 569 aa14.16□□□□□ -0.14
Limch1-201ENSMUST00000038188 BicraF8VPZ9 1578 aa14.16□□□□□ -0.14
Limch1-201ENSMUST00000038188 Afap1Q80YS6 731 aa14.16□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms