RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 NclP09405 707 aaKnown RBP7.89□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 Cecr2E9Q2Z1 1453 aa7.87□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 Esf1Q3V1V3 845 aaKnown RBP7.86□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 Plekhg3Q4VAC9 1341 aa7.86□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 Atad2bE9Q166 1460 aaKnown RBP7.86□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 DaxxO35613 739 aa7.85□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 Pak3Q61036 559 aa7.85□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 Smarca4Q3TKT4 1613 aaKnown RBP7.85□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 Brd4Q9ESU6 1400 aaKnown RBP7.85□□□□□ -1.15
Rc3h1-201ENSMUST00000035911 Ipo4Q8VI75 1082 aa7.82□□□□□ -1.16
Rc3h1-201ENSMUST00000035911 Washc2Q6PGL7 1334 aa7.8□□□□□ -1.16
Rc3h1-201ENSMUST00000035911 Npm2Q80W85 207 aa7.8□□□□□ -1.16
Rc3h1-201ENSMUST00000035911 Ipo9Q91YE6 1041 aa7.8□□□□□ -1.16
Rc3h1-201ENSMUST00000035911 Baz1bQ9Z277 1479 aa7.8□□□□□ -1.16
Rc3h1-201ENSMUST00000035911 Golga3P55937 1487 aa7.78□□□□□ -1.16
Rc3h1-201ENSMUST00000035911 Rpap1Q80TE0 1409 aa7.78□□□□□ -1.16
Rc3h1-201ENSMUST00000035911 CftrP26361 1476 aa7.77□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Clip1Q922J3 1391 aa7.77□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Iqgap2Q3UQ44 1575 aa7.76□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 P3h3Q8CG70 732 aa7.76□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Ccer2J3QPU5 274 aa7.76□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Slc4a3P16283 1227 aa7.76□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Liat1Q810M6 228 aa7.76□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Synj1Q8CHC4 1574 aa7.74□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Cttnbp2B9EJA2 1648 aa7.73□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Egfem1Q8C088 590 aa7.72□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Ercc6F8VPZ5 1481 aa7.72□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 NeflP08551 543 aa7.72□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Ncapd3Q6ZQK0 1506 aa7.71□□□□□ -1.17
Rc3h1-201ENSMUST00000035911 Gm13697A2AK42 830 aa7.71□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 ArxO35085 564 aa7.71□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Tcerg1Q8CGF7 1100 aaKnown RBP7.7□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Iqcf3Q9D498 203 aa7.69□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Fam135aQ6NS59 1506 aa7.69□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Mrs2Q5NCE8 434 aa7.69□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Rtn4Q99P72 1162 aaKnown RBP7.68□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Fam50aQ9WV03 339 aaKnown RBP7.68□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Taok2Q6ZQ29 1240 aa7.68□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Smg6P61406 1418 aaKnown RBP7.68□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Pdcl3Q8BVF2 240 aa7.67□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Wdr62Q3U3T8 1523 aa7.67□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Rapgef2Q8CHG7 1496 aa7.67□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Cep162Q6ZQ06 1403 aa7.67□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Sin3aQ60520 1274 aaKnown RBP7.66□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Senp3Q9EP97 568 aaKnown RBP7.66□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 ChgaP26339 463 aaKnown RBP7.66□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Frmpd1A2AKB4 1549 aa7.66□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 Cc2d2aQ8CFW7 1633 aa7.65□□□□□ -1.18
Rc3h1-201ENSMUST00000035911 AU015836B2RUM3 263 aa7.64□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Dnajc5P60904 198 aa7.64□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 AampJ3QN89 436 aa7.62□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 CanxP35564 591 aaKnown RBP7.62□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Zfp777B9EKF4 885 aa7.61□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Phldb1Q6PDH0 1371 aaKnown RBP7.61□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Hspa5P20029 655 aaKnown RBP7.61□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Gtf2a1Q99PM3 378 aa7.61□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Zbtb4Q5F293 982 aa7.6□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Znf692Q3U381 531 aa7.6□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Wwc2Q6NXJ0 1187 aa7.59□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Kcnn1Q9EQR3 537 aa7.59□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Arhgap27A2AB59 869 aa7.59□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Dnttip2Q8R2M2 758 aaKnown RBP7.59□□□□□ -1.19
Rc3h1-201ENSMUST00000035911 Ofd1Q80Z25 1017 aa7.58□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 DmtnQ9WV69 405 aa7.57□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Kcnh8P59111 1102 aa7.57□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Rrp9Q91WM3 475 aaKnown RBP7.57□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Anp32bQ9EST5 272 aaKnown RBP7.56□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Slc4a2P13808 1237 aaKnown RBP7.56□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Zbtb7cQ8VCZ7 619 aa7.56□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 UacaQ8CGB3 1411 aa7.56□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Top2bQ64511 1612 aa7.55□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Exoc6Q8R313 802 aa7.55□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Sart3Q9JLI8 962 aaKnown RBP7.54□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Eea1Q8BL66 1411 aa7.53□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Gm13695A2AK44 830 aa7.53□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Arid3aQ62431 601 aa7.53□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Dnai1Q8C0M8 701 aa7.53□□□□□ -1.2
Rc3h1-201ENSMUST00000035911 Ubl4bQ9CQ84 188 aa7.52□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Mre11Q61216 706 aa7.51□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Gtf3c5Q8R2T8 520 aa7.51□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 BccipQ9CWI3 316 aa7.51□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Prdm10Q3UTQ7 1184 aa7.51□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Kdm5bQ80Y84 1544 aa7.51□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Ccdc18Q640L5 1455 aa7.51□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 BlmO88700 1416 aa7.5□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Setd5Q5XJV7 1441 aa7.5□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Fmn1Q05860 1466 aa7.5□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Slc4a1apE9PX68 744 aa7.5□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 NgefQ8CHT1 710 aa7.5□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Ppm1gQ61074 542 aa7.5□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 B4galnt3Q6L8S8 986 aa7.49□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Dmrt2Q8BG36 561 aa7.49□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Lamc3Q9R0B6 1581 aa7.48□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Kif15Q6P9L6 1387 aa7.48□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Prdm16A2A935 1275 aa7.48□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 L3mbtl2P59178 703 aa7.48□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Lmod2Q3UHZ5 550 aa7.48□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Armcx1Q9CX83 456 aa7.48□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Unc13aQ4KUS2 1712 aa7.47□□□□□ -1.21
Rc3h1-201ENSMUST00000035911 Ttll13A4Q9F6 804 aa7.47□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms