RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 BlmO88700 1416 aa22.45■■□□□ 1.18
Col17a1-201ENSMUST00000026045 Upf2A2AT37 1269 aaKnown RBP22.43■■□□□ 1.18
Col17a1-201ENSMUST00000026045 Chic2Q9D9G3 165 aa22.43■■□□□ 1.18
Col17a1-201ENSMUST00000026045 Trim44Q9QXA7 346 aa22.43■■□□□ 1.18
Col17a1-201ENSMUST00000026045 Ccer2J3QPU5 274 aa22.41■■□□□ 1.18
Col17a1-201ENSMUST00000026045 SafbD3YXK2 937 aaKnown RBP22.41■■□□□ 1.18
Col17a1-201ENSMUST00000026045 Erich6D3Z6S9 713 aa22.39■■□□□ 1.18
Col17a1-201ENSMUST00000026045 Setd5Q5XJV7 1441 aa22.38■■□□□ 1.17
Col17a1-201ENSMUST00000026045 CanxP35564 591 aaKnown RBP22.36■■□□□ 1.17
Col17a1-201ENSMUST00000026045 Aebp2Q9Z248 504 aaKnown RBP22.35■■□□□ 1.17
Col17a1-201ENSMUST00000026045 Gtf3c3Q3TMP1 882 aa22.27■■□□□ 1.16
Col17a1-201ENSMUST00000026045 Prdm10Q3UTQ7 1184 aa22.27■■□□□ 1.16
Col17a1-201ENSMUST00000026045 AU015836B2RUM3 263 aa22.25■■□□□ 1.15
Col17a1-201ENSMUST00000026045 Kif15Q6P9L6 1387 aa22.25■■□□□ 1.15
Col17a1-201ENSMUST00000026045 Taok2Q6ZQ29 1240 aa22.22■■□□□ 1.15
Col17a1-201ENSMUST00000026045 Tnnt2P50752 301 aa22.21■■□□□ 1.15
Col17a1-201ENSMUST00000026045 Hdac5Q9Z2V6 1113 aa22.2■■□□□ 1.14
Col17a1-201ENSMUST00000026045 Nlrp6Q91WS2 869 aa22.2■■□□□ 1.14
Col17a1-201ENSMUST00000026045 DekQ7TNV0 380 aaKnown RBP22.17■■□□□ 1.14
Col17a1-201ENSMUST00000026045 Ccdc88bQ4QRL3 1481 aa22.15■■□□□ 1.14
Col17a1-201ENSMUST00000026045 Gm13697A2AK42 830 aa22.13■■□□□ 1.13
Col17a1-201ENSMUST00000026045 Atp1b4Q99ME6 356 aa22.13■■□□□ 1.13
Col17a1-201ENSMUST00000026045 Eea1Q8BL66 1411 aa22.12■■□□□ 1.13
Col17a1-201ENSMUST00000026045 Mrs2Q5NCE8 434 aa22.12■■□□□ 1.13
Col17a1-201ENSMUST00000026045 Vsig10D3YX43 558 aa22.09■■□□□ 1.13
Col17a1-201ENSMUST00000026045 Htatsf1Q8BGC0 757 aa22.08■■□□□ 1.13
Col17a1-201ENSMUST00000026045 Polr3glQ8R0C0 218 aa22.06■■□□□ 1.12
Col17a1-201ENSMUST00000026045 Hsp90ab1P11499 724 aaKnown RBP22.03■■□□□ 1.12
Col17a1-201ENSMUST00000026045 Supt16hQ920B9 1047 aa22■■□□□ 1.11
Col17a1-201ENSMUST00000026045 Ccdc18Q640L5 1455 aa21.99■■□□□ 1.11
Col17a1-201ENSMUST00000026045 Ercc6F8VPZ5 1481 aa21.97■■□□□ 1.11
Col17a1-201ENSMUST00000026045 Rad21Q61550 635 aaKnown RBP21.96■■□□□ 1.11
Col17a1-201ENSMUST00000026045 P3h3Q8CG70 732 aa21.96■■□□□ 1.11
Col17a1-201ENSMUST00000026045 Trim30dE9PWL0 497 aa21.95■■□□□ 1.1
Col17a1-201ENSMUST00000026045 Rgl3Q3UYI5 709 aa21.93■■□□□ 1.1
Col17a1-201ENSMUST00000026045 Ppm1gQ61074 542 aa21.93■■□□□ 1.1
Col17a1-201ENSMUST00000026045 Dnttip2Q8R2M2 758 aaKnown RBP21.92■■□□□ 1.1
Col17a1-201ENSMUST00000026045 PtmaP26350 111 aa21.91■■□□□ 1.1
Col17a1-201ENSMUST00000026045 Cep162Q6ZQ06 1403 aa21.88■■□□□ 1.09
Col17a1-201ENSMUST00000026045 Plcb2A3KGF7 1181 aa21.88■■□□□ 1.09
Col17a1-201ENSMUST00000026045 Spryd3E9Q9B3 442 aa21.87■■□□□ 1.09
Col17a1-201ENSMUST00000026045 Sycp2Q9CUU3 1500 aa21.86■■□□□ 1.09
Col17a1-201ENSMUST00000026045 Clstn2Q9ER65 966 aa21.85■■□□□ 1.09
Col17a1-201ENSMUST00000026045 Ipo9Q91YE6 1041 aa21.83■■□□□ 1.09
Col17a1-201ENSMUST00000026045 Fmn1Q05860 1466 aa21.83■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Gm13695A2AK44 830 aa21.81■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Plcd4Q8K3R3 807 aa21.8■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Rtn4Q99P72 1162 aaKnown RBP21.8■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Znf316Q6PGE4 1016 aa21.79■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Arhgap27A2AB59 869 aa21.78■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Cecr2E9Q2Z1 1453 aa21.78■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Rangap1P46061 589 aaKnown RBP21.77■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Ofd1Q80Z25 1017 aa21.77■■□□□ 1.08
Col17a1-201ENSMUST00000026045 Grwd1Q810D6 446 aaKnown RBP21.75■■□□□ 1.07
Col17a1-201ENSMUST00000026045 Crybg2B7ZCC2 1516 aa21.74■■□□□ 1.07
Col17a1-201ENSMUST00000026045 Slc4a3P16283 1227 aa21.74■■□□□ 1.07
Col17a1-201ENSMUST00000026045 Rrp12Q6P5B0 1295 aaKnown RBP21.74■■□□□ 1.07
Col17a1-201ENSMUST00000026045 Tcerg1Q8CGF7 1100 aaKnown RBP21.74■■□□□ 1.07
Col17a1-201ENSMUST00000026045 Hspa5P20029 655 aaKnown RBP21.72■■□□□ 1.07
Col17a1-201ENSMUST00000026045 Smarca2Q6DIC0 1577 aa21.72■■□□□ 1.07
Col17a1-201ENSMUST00000026045 CftrP26361 1476 aa21.72■■□□□ 1.07
Col17a1-201ENSMUST00000026045 ScribQ80U72 1612 aa21.7■■□□□ 1.06
Col17a1-201ENSMUST00000026045 Arid4bA2CG63 1314 aaKnown RBP21.7■■□□□ 1.06
Col17a1-201ENSMUST00000026045 Nolc1E9Q5C9 702 aaKnown RBP21.69■■□□□ 1.06
Col17a1-201ENSMUST00000026045 Znf326O88291 580 aa21.69■■□□□ 1.06
Col17a1-201ENSMUST00000026045 Plppr3Q7TPB0 716 aa21.68■■□□□ 1.06
Col17a1-201ENSMUST00000026045 Mia2Q91ZV0 1396 aa21.67■■□□□ 1.06
Col17a1-201ENSMUST00000026045 Pds5bQ4VA53 1446 aaKnown RBP21.66■■□□□ 1.06
Col17a1-201ENSMUST00000026045 MsnP26041 577 aaKnown RBP21.64■■□□□ 1.06
Col17a1-201ENSMUST00000026045 Card11Q8CIS0 1159 aa21.64■■□□□ 1.05
Col17a1-201ENSMUST00000026045 Adam1bQ8R534 806 aa21.63■■□□□ 1.05
Col17a1-201ENSMUST00000026045 Synj1Q8CHC4 1574 aa21.63■■□□□ 1.05
Col17a1-201ENSMUST00000026045 Erich6bQ9D4S6 220 aa21.62■■□□□ 1.05
Col17a1-201ENSMUST00000026045 Mtus2Q3UHD3 1353 aa21.62■■□□□ 1.05
Col17a1-201ENSMUST00000026045 Dnai1Q8C0M8 701 aa21.6■■□□□ 1.05
Col17a1-201ENSMUST00000026045 Kdm2aP59997 1161 aa21.59■■□□□ 1.05
Col17a1-201ENSMUST00000026045 Dbr1Q923B1 550 aa21.56■■□□□ 1.04
Col17a1-201ENSMUST00000026045 B4galnt3Q6L8S8 986 aa21.55■■□□□ 1.04
Col17a1-201ENSMUST00000026045 Rrp7aQ9D1C9 280 aaKnown RBP21.55■■□□□ 1.04
Col17a1-201ENSMUST00000026045 Rapgef2Q8CHG7 1496 aa21.54■■□□□ 1.04
Col17a1-201ENSMUST00000026045 Cwc22Q8C5N3 908 aaKnown RBP21.54■■□□□ 1.04
Col17a1-201ENSMUST00000026045 Pdcl3Q8BVF2 240 aa21.53■■□□□ 1.04
Col17a1-201ENSMUST00000026045 Aebp1Q640N1 1128 aa21.53■■□□□ 1.04
Col17a1-201ENSMUST00000026045 Trim26Q99PN3 545 aa21.52■■□□□ 1.04
Col17a1-201ENSMUST00000026045 Mroh3A0A1D5RM54 893 aa21.52■■□□□ 1.03
Col17a1-201ENSMUST00000026045 IbspQ61711 324 aa21.51■■□□□ 1.03
Col17a1-201ENSMUST00000026045 BccipQ9CWI3 316 aa21.5■■□□□ 1.03
Col17a1-201ENSMUST00000026045 Kif27Q7M6Z4 1394 aa21.5■■□□□ 1.03
Col17a1-201ENSMUST00000026045 Ddrgk1Q80WW9 315 aa21.5■■□□□ 1.03
Col17a1-201ENSMUST00000026045 Fbxo2Q80UW2 297 aa21.47■■□□□ 1.03
Col17a1-201ENSMUST00000026045 Sin3aQ60520 1274 aaKnown RBP21.47■■□□□ 1.03
Col17a1-201ENSMUST00000026045 Wwc2Q6NXJ0 1187 aa21.47■■□□□ 1.03
Col17a1-201ENSMUST00000026045 Ipo4Q8VI75 1082 aa21.46■■□□□ 1.03
Col17a1-201ENSMUST00000026045 Baz1bQ9Z277 1479 aa21.45■■□□□ 1.02
Col17a1-201ENSMUST00000026045 Pkd2O35245 966 aa21.44■■□□□ 1.02
Col17a1-201ENSMUST00000026045 4933402E13RikQ9D4D2 429 aa21.43■■□□□ 1.02
Col17a1-201ENSMUST00000026045 Fyco1Q8VDC1 1437 aa21.43■■□□□ 1.02
Col17a1-201ENSMUST00000026045 Apbb1Q9QXJ1 710 aa21.42■■□□□ 1.02
Col17a1-201ENSMUST00000026045 VgfQ0VGU4 617 aa21.41■■□□□ 1.02
Col17a1-201ENSMUST00000026045 Srpk2O54781 681 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms