RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Rhox8Q6VSS7 320 aa29.17■■■□□ 2.26
Col17a1-201ENSMUST00000026045 Rpgrip1Q9EPQ2 1331 aa28.16■■■□□ 2.1
Col17a1-201ENSMUST00000026045 Las1lA2BE28 776 aaKnown RBP27.49■■□□□ 1.99
Col17a1-201ENSMUST00000026045 Cngb1E1AZ71 1325 aa27.03■■□□□ 1.92
Col17a1-201ENSMUST00000026045 Ehmt2Q9Z148 1263 aaKnown RBP26.58■■□□□ 1.85
Col17a1-201ENSMUST00000026045 NischQ80TM9 1593 aa26.55■■□□□ 1.84
Col17a1-201ENSMUST00000026045 Pelp1Q9DBD5 1123 aaKnown RBP26.3■■□□□ 1.8
Col17a1-201ENSMUST00000026045 Ccdc136Q3TVA9 1136 aa26.2■■□□□ 1.78
Col17a1-201ENSMUST00000026045 CenpbP27790 599 aa26.11■■□□□ 1.77
Col17a1-201ENSMUST00000026045 Myt1Q8CFC2 1127 aa25.99■■□□□ 1.75
Col17a1-201ENSMUST00000026045 Wdr66E9Q743 1299 aa25.89■■□□□ 1.74
Col17a1-201ENSMUST00000026045 Zeb1Q64318 1117 aa25.85■■□□□ 1.73
Col17a1-201ENSMUST00000026045 Amer1Q7TS75 1132 aa25.79■■□□□ 1.72
Col17a1-201ENSMUST00000026045 Acin1Q9JIX8 1338 aaKnown RBP25.77■■□□□ 1.72
Col17a1-201ENSMUST00000026045 Esf1Q3V1V3 845 aaKnown RBP25.59■■□□□ 1.69
Col17a1-201ENSMUST00000026045 Gab3Q8BSM5 595 aa25.49■■□□□ 1.67
Col17a1-201ENSMUST00000026045 Pcgf6Q99NA9 353 aa25.47■■□□□ 1.67
Col17a1-201ENSMUST00000026045 Trim41Q5NCC3 630 aa25.46■■□□□ 1.67
Col17a1-201ENSMUST00000026045 DiexfQ8BTT6 772 aaKnown RBP25.4■■□□□ 1.66
Col17a1-201ENSMUST00000026045 Npm2Q80W85 207 aa24.98■■□□□ 1.59
Col17a1-201ENSMUST00000026045 Ttbk1Q6PCN3 1308 aa24.97■■□□□ 1.59
Col17a1-201ENSMUST00000026045 Ccdc180J3QNE4 1664 aa24.94■■□□□ 1.58
Col17a1-201ENSMUST00000026045 Myt1lP97500 1187 aa24.92■■□□□ 1.58
Col17a1-201ENSMUST00000026045 Abcc9P70170 1546 aa24.9■■□□□ 1.58
Col17a1-201ENSMUST00000026045 NefmP08553 848 aa24.88■■□□□ 1.57
Col17a1-201ENSMUST00000026045 Cdk11bP24788 784 aaKnown RBP24.85■■□□□ 1.57
Col17a1-201ENSMUST00000026045 Ube2uB1AUC4 352 aa24.74■■□□□ 1.55
Col17a1-201ENSMUST00000026045 Rtl1Q7M732 1744 aa24.71■■□□□ 1.55
Col17a1-201ENSMUST00000026045 Supt5hO55201 1082 aaKnown RBP24.67■■□□□ 1.54
Col17a1-201ENSMUST00000026045 HrcG5E8J6 738 aa24.67■■□□□ 1.54
Col17a1-201ENSMUST00000026045 Stra8P70278 393 aa24.63■■□□□ 1.53
Col17a1-201ENSMUST00000026045 4930567H17RikQ3V0K5 233 aa24.57■■□□□ 1.52
Col17a1-201ENSMUST00000026045 4933416C03RikQ3V063 378 aa24.56■■□□□ 1.52
Col17a1-201ENSMUST00000026045 UbtfP25976 765 aaKnown RBP24.54■■□□□ 1.52
Col17a1-201ENSMUST00000026045 Nop58Q6DFW4 536 aaKnown RBP24.5■■□□□ 1.51
Col17a1-201ENSMUST00000026045 Tnnt3Q9QZ47 272 aa24.47■■□□□ 1.51
Col17a1-201ENSMUST00000026045 Rtl5Q5DTT4 599 aa24.46■■□□□ 1.51
Col17a1-201ENSMUST00000026045 Zcchc6Q5BLK4 1491 aaKnown RBP24.4■■□□□ 1.5
Col17a1-201ENSMUST00000026045 Abcc8B2RUS7 1588 aa24.35■■□□□ 1.49
Col17a1-201ENSMUST00000026045 Neurod1Q60867 357 aa24.3■■□□□ 1.48
Col17a1-201ENSMUST00000026045 Slc24a1Q91WD8 1130 aa24.22■■□□□ 1.47
Col17a1-201ENSMUST00000026045 Gm35339A0A140LHH9 1649 aa24.19■■□□□ 1.46
Col17a1-201ENSMUST00000026045 Il27Q8K3I6 234 aa24.14■■□□□ 1.45
Col17a1-201ENSMUST00000026045 Csrnp3P59055 597 aa24.01■■□□□ 1.43
Col17a1-201ENSMUST00000026045 Aplp2Q06335 707 aa23.96■■□□□ 1.43
Col17a1-201ENSMUST00000026045 Anks4bQ8K3X6 423 aa23.92■■□□□ 1.42
Col17a1-201ENSMUST00000026045 Ppargc1bQ8VHJ7 1014 aa23.91■■□□□ 1.42
Col17a1-201ENSMUST00000026045 Anp32aO35381 247 aa23.9■■□□□ 1.42
Col17a1-201ENSMUST00000026045 Gm38655A0A286YDK6 273 aa23.86■■□□□ 1.41
Col17a1-201ENSMUST00000026045 Ap3b1Q9Z1T1 1105 aa23.85■■□□□ 1.41
Col17a1-201ENSMUST00000026045 Eif5bQ05D44 1216 aaKnown RBP23.7■■□□□ 1.38
Col17a1-201ENSMUST00000026045 Bcl11aQ9QYE3 773 aa23.69■■□□□ 1.38
Col17a1-201ENSMUST00000026045 Fam50aQ9WV03 339 aaKnown RBP23.68■■□□□ 1.38
Col17a1-201ENSMUST00000026045 DaxxO35613 739 aa23.66■■□□□ 1.38
Col17a1-201ENSMUST00000026045 1700123L14RikQ3V2K7 440 aa23.66■■□□□ 1.38
Col17a1-201ENSMUST00000026045 Mier1Q5UAK0 511 aa23.65■■□□□ 1.38
Col17a1-201ENSMUST00000026045 NrdcQ8BHG1 1161 aa23.57■■□□□ 1.36
Col17a1-201ENSMUST00000026045 NeflP08551 543 aa23.56■■□□□ 1.36
Col17a1-201ENSMUST00000026045 ClspnQ80YR7 1315 aa23.5■■□□□ 1.35
Col17a1-201ENSMUST00000026045 NclP09405 707 aaKnown RBP23.49■■□□□ 1.35
Col17a1-201ENSMUST00000026045 TonslQ6NZL6 1363 aa23.48■■□□□ 1.35
Col17a1-201ENSMUST00000026045 Sall2Q9QX96 1004 aa23.44■■□□□ 1.34
Col17a1-201ENSMUST00000026045 Rb1cc1Q9ESK9 1588 aa23.38■■□□□ 1.33
Col17a1-201ENSMUST00000026045 Plekhg3Q4VAC9 1341 aa23.35■■□□□ 1.33
Col17a1-201ENSMUST00000026045 Chic1Q8CBW7 227 aa23.33■■□□□ 1.32
Col17a1-201ENSMUST00000026045 Dcaf1Q80TR8 1506 aa23.31■■□□□ 1.32
Col17a1-201ENSMUST00000026045 Ccdc9Q8VC31 543 aaKnown RBP23.29■■□□□ 1.32
Col17a1-201ENSMUST00000026045 Ythdc1E9Q5K9 736 aaKnown RBP23.26■■□□□ 1.31
Col17a1-201ENSMUST00000026045 Brd4Q9ESU6 1400 aaKnown RBP23.25■■□□□ 1.31
Col17a1-201ENSMUST00000026045 Cep164Q5DU05 1446 aa23.25■■□□□ 1.31
Col17a1-201ENSMUST00000026045 Lmod2Q3UHZ5 550 aa23.21■■□□□ 1.31
Col17a1-201ENSMUST00000026045 Fam71e1A1L3C1 212 aa23.2■■□□□ 1.3
Col17a1-201ENSMUST00000026045 Npm1Q61937 292 aaKnown RBP23.13■■□□□ 1.29
Col17a1-201ENSMUST00000026045 Mapk8ip2Q9ERE9 830 aa23.13■■□□□ 1.29
Col17a1-201ENSMUST00000026045 Anp32bQ9EST5 272 aaKnown RBP23.13■■□□□ 1.29
Col17a1-201ENSMUST00000026045 Hsp90aa1P07901 733 aaKnown RBP23.08■■□□□ 1.28
Col17a1-201ENSMUST00000026045 Calr4Q3TQS0 420 aa22.98■■□□□ 1.27
Col17a1-201ENSMUST00000026045 Ppp4r2Q0VGB7 417 aa22.96■■□□□ 1.27
Col17a1-201ENSMUST00000026045 Clip1Q922J3 1391 aa22.96■■□□□ 1.27
Col17a1-201ENSMUST00000026045 Eid3Q3V124 375 aa22.95■■□□□ 1.27
Col17a1-201ENSMUST00000026045 Os9Q8K2C7 672 aa22.91■■□□□ 1.26
Col17a1-201ENSMUST00000026045 NacadQ5SWP3 1504 aa22.86■■□□□ 1.25
Col17a1-201ENSMUST00000026045 Zbtb7cQ8VCZ7 619 aa22.85■■□□□ 1.25
Col17a1-201ENSMUST00000026045 Baz1aO88379 1555 aa22.82■■□□□ 1.24
Col17a1-201ENSMUST00000026045 Wdr43Q6ZQL4 677 aaKnown RBP22.82■■□□□ 1.24
Col17a1-201ENSMUST00000026045 Irx3P81067 507 aa22.76■■□□□ 1.23
Col17a1-201ENSMUST00000026045 Ccdc27Q3V036 639 aa22.76■■□□□ 1.23
Col17a1-201ENSMUST00000026045 Lmod3E9QA62 571 aa22.66■■□□□ 1.22
Col17a1-201ENSMUST00000026045 Hnrnpul2Q00PI9 745 aaKnown RBP22.63■■□□□ 1.21
Col17a1-201ENSMUST00000026045 ArxO35085 564 aa22.61■■□□□ 1.21
Col17a1-201ENSMUST00000026045 Zbtb4Q5F293 982 aa22.59■■□□□ 1.21
Col17a1-201ENSMUST00000026045 Golga3P55937 1487 aa22.58■■□□□ 1.21
Col17a1-201ENSMUST00000026045 PrkcshO08795 521 aa22.54■■□□□ 1.2
Col17a1-201ENSMUST00000026045 Ubl4bQ9CQ84 188 aa22.53■■□□□ 1.2
Col17a1-201ENSMUST00000026045 Kdm5dQ62240 1548 aa22.53■■□□□ 1.2
Col17a1-201ENSMUST00000026045 CatipB9EKE5 520 aa22.52■■□□□ 1.2
Col17a1-201ENSMUST00000026045 Ifnlr1Q8CGK5 535 aa22.5■■□□□ 1.19
Col17a1-201ENSMUST00000026045 Fkbp15Q6P9Q6 1216 aaKnown RBP22.47■■□□□ 1.19
Col17a1-201ENSMUST00000026045 Pknox2Q8BG99 474 aa22.46■■□□□ 1.19
Col17a1-201ENSMUST00000026045 Rsf1E9PWW9 1441 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms