RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Fgd1P52734 960 aa17.19■□□□□ 0.34
Trim23-201ENSMUST00000022225 UacaQ8CGB3 1411 aa17.18■□□□□ 0.34
Trim23-201ENSMUST00000022225 Pak3Q61036 559 aa17.18■□□□□ 0.34
Trim23-201ENSMUST00000022225 Liat1Q810M6 228 aa17.18■□□□□ 0.34
Trim23-201ENSMUST00000022225 Gtf3c3Q3TMP1 882 aa17.17■□□□□ 0.34
Trim23-201ENSMUST00000022225 Egfem1Q8C088 590 aa17.15■□□□□ 0.34
Trim23-201ENSMUST00000022225 Gm13697A2AK42 830 aa17.15■□□□□ 0.34
Trim23-201ENSMUST00000022225 NclP09405 707 aaKnown RBP17.14■□□□□ 0.33
Trim23-201ENSMUST00000022225 Arap1Q4LDD4 1452 aa17.14■□□□□ 0.33
Trim23-201ENSMUST00000022225 Ccdc9Q8VC31 543 aaKnown RBP17.14■□□□□ 0.33
Trim23-201ENSMUST00000022225 Ttbk1Q6PCN3 1308 aa17.13■□□□□ 0.33
Trim23-201ENSMUST00000022225 Il27Q8K3I6 234 aa17.12■□□□□ 0.33
Trim23-201ENSMUST00000022225 Npm2Q80W85 207 aa17.12■□□□□ 0.33
Trim23-201ENSMUST00000022225 Smg6P61406 1418 aaKnown RBP17.11■□□□□ 0.33
Trim23-201ENSMUST00000022225 Ccdc18Q640L5 1455 aa17.11■□□□□ 0.33
Trim23-201ENSMUST00000022225 Arhgef5E9Q7D5 1581 aa17.08■□□□□ 0.33
Trim23-201ENSMUST00000022225 NrdcQ8BHG1 1161 aa17.06■□□□□ 0.32
Trim23-201ENSMUST00000022225 Eea1Q8BL66 1411 aa17.05■□□□□ 0.32
Trim23-201ENSMUST00000022225 Irx3P81067 507 aa17.05■□□□□ 0.32
Trim23-201ENSMUST00000022225 Plcd4Q8K3R3 807 aa17.04■□□□□ 0.32
Trim23-201ENSMUST00000022225 Arhgap35Q91YM2 1499 aa17.02■□□□□ 0.32
Trim23-201ENSMUST00000022225 Ncoa2Q61026 1462 aa17.01■□□□□ 0.31
Trim23-201ENSMUST00000022225 Camsap2Q8C1B1 1461 aa16.99■□□□□ 0.31
Trim23-201ENSMUST00000022225 Smarca4Q3TKT4 1613 aaKnown RBP16.99■□□□□ 0.31
Trim23-201ENSMUST00000022225 Ipo9Q91YE6 1041 aa16.99■□□□□ 0.31
Trim23-201ENSMUST00000022225 Slc24a1Q91WD8 1130 aa16.98■□□□□ 0.31
Trim23-201ENSMUST00000022225 Ankrd36D3Z4K0 1415 aa16.96■□□□□ 0.31
Trim23-201ENSMUST00000022225 Hsp90aa1P07901 733 aaKnown RBP16.96■□□□□ 0.31
Trim23-201ENSMUST00000022225 Tiam1Q60610 1591 aa16.96■□□□□ 0.31
Trim23-201ENSMUST00000022225 Pknox2Q8BG99 474 aa16.95■□□□□ 0.3
Trim23-201ENSMUST00000022225 BicraF8VPZ9 1578 aa16.95■□□□□ 0.3
Trim23-201ENSMUST00000022225 Eif5bQ05D44 1216 aaKnown RBP16.95■□□□□ 0.3
Trim23-201ENSMUST00000022225 Hspa5P20029 655 aaKnown RBP16.92■□□□□ 0.3
Trim23-201ENSMUST00000022225 Sin3aQ60520 1274 aaKnown RBP16.92■□□□□ 0.3
Trim23-201ENSMUST00000022225 Setd5Q5XJV7 1441 aa16.89■□□□□ 0.29
Trim23-201ENSMUST00000022225 Ccer2J3QPU5 274 aa16.87■□□□□ 0.29
Trim23-201ENSMUST00000022225 NrkQ9R0G8 1455 aa16.87■□□□□ 0.29
Trim23-201ENSMUST00000022225 Ipo4Q8VI75 1082 aa16.86■□□□□ 0.29
Trim23-201ENSMUST00000022225 Dhx29Q6PGC1 1365 aaKnown RBP16.86■□□□□ 0.29
Trim23-201ENSMUST00000022225 Naip1Q9QWK5 1403 aa16.85■□□□□ 0.29
Trim23-201ENSMUST00000022225 P3h3Q8CG70 732 aa16.83■□□□□ 0.28
Trim23-201ENSMUST00000022225 Fhad1A6PWD2 1420 aa16.82■□□□□ 0.28
Trim23-201ENSMUST00000022225 Iqcf3Q9D498 203 aa16.82■□□□□ 0.28
Trim23-201ENSMUST00000022225 Slc4a2P13808 1237 aaKnown RBP16.81■□□□□ 0.28
Trim23-201ENSMUST00000022225 Slc4a3P16283 1227 aa16.81■□□□□ 0.28
Trim23-201ENSMUST00000022225 PtprkP35822 1457 aa16.8■□□□□ 0.28
Trim23-201ENSMUST00000022225 AqrQ8CFQ3 1481 aaKnown RBP16.8■□□□□ 0.28
Trim23-201ENSMUST00000022225 Naip5Q9R016 1403 aa16.8■□□□□ 0.28
Trim23-201ENSMUST00000022225 Fam50aQ9WV03 339 aaKnown RBP16.8■□□□□ 0.28
Trim23-201ENSMUST00000022225 Tcerg1Q8CGF7 1100 aaKnown RBP16.79■□□□□ 0.28
Trim23-201ENSMUST00000022225 Mrs2Q5NCE8 434 aa16.79■□□□□ 0.28
Trim23-201ENSMUST00000022225 BlmO88700 1416 aa16.78■□□□□ 0.28
Trim23-201ENSMUST00000022225 Pprc1Q6NZN1 1644 aa16.78■□□□□ 0.28
Trim23-201ENSMUST00000022225 Fyco1Q8VDC1 1437 aa16.76■□□□□ 0.27
Trim23-201ENSMUST00000022225 Erich3F6QRE9 1637 aa16.76■□□□□ 0.27
Trim23-201ENSMUST00000022225 TnnQ80Z71 1560 aa16.76■□□□□ 0.27
Trim23-201ENSMUST00000022225 Map3k1P53349 1493 aa16.76■□□□□ 0.27
Trim23-201ENSMUST00000022225 3425401B19RikD3Z1D3 1412 aa16.75■□□□□ 0.27
Trim23-201ENSMUST00000022225 Vps8Q0P5W1 1427 aa16.75■□□□□ 0.27
Trim23-201ENSMUST00000022225 Mia2Q91ZV0 1396 aa16.75■□□□□ 0.27
Trim23-201ENSMUST00000022225 Arhgap27A2AB59 869 aa16.74■□□□□ 0.27
Trim23-201ENSMUST00000022225 Slx4Q6P1D7 1565 aa16.74■□□□□ 0.27
Trim23-201ENSMUST00000022225 Gm13695A2AK44 830 aa16.71■□□□□ 0.27
Trim23-201ENSMUST00000022225 Crocc2F6XLV1 1638 aa16.7■□□□□ 0.26
Trim23-201ENSMUST00000022225 Kcnn1Q9EQR3 537 aa16.7■□□□□ 0.26
Trim23-201ENSMUST00000022225 Efcab5A0JP43 1406 aa16.69■□□□□ 0.26
Trim23-201ENSMUST00000022225 Ankrd26Q811D2 1581 aa16.68■□□□□ 0.26
Trim23-201ENSMUST00000022225 Cul7Q8VE73 1689 aa16.68■□□□□ 0.26
Trim23-201ENSMUST00000022225 Pcf11G3X9Z4 1553 aa16.67■□□□□ 0.26
Trim23-201ENSMUST00000022225 Thoc2B1AZI6 1594 aaKnown RBP16.67■□□□□ 0.26
Trim23-201ENSMUST00000022225 Kcnh8P59111 1102 aa16.67■□□□□ 0.26
Trim23-201ENSMUST00000022225 4933416C03RikQ3V063 378 aa16.67■□□□□ 0.26
Trim23-201ENSMUST00000022225 Wwc2Q6NXJ0 1187 aa16.66■□□□□ 0.26
Trim23-201ENSMUST00000022225 Ncoa1P70365 1447 aa16.66■□□□□ 0.26
Trim23-201ENSMUST00000022225 PnisrA2AJT4 805 aaKnown RBP16.66■□□□□ 0.26
Trim23-201ENSMUST00000022225 Exoc6Q8R313 802 aa16.66■□□□□ 0.26
Trim23-201ENSMUST00000022225 EprsQ8CGC7 1512 aaKnown RBP16.65■□□□□ 0.26
Trim23-201ENSMUST00000022225 Shroom4Q1W617 1475 aa16.63■□□□□ 0.25
Trim23-201ENSMUST00000022225 DaxxO35613 739 aa16.63■□□□□ 0.25
Trim23-201ENSMUST00000022225 Naip2Q9QUK4 1447 aa16.63■□□□□ 0.25
Trim23-201ENSMUST00000022225 ChgaP26339 463 aaKnown RBP16.62■□□□□ 0.25
Trim23-201ENSMUST00000022225 L3mbtl2P59178 703 aa16.61■□□□□ 0.25
Trim23-201ENSMUST00000022225 Mink1Q9JM52 1308 aa16.6■□□□□ 0.25
Trim23-201ENSMUST00000022225 Lmo7E9PYF4 1699 aaKnown RBP16.58■□□□□ 0.25
Trim23-201ENSMUST00000022225 Dennd4bQ3U1Y4 1499 aa16.57■□□□□ 0.24
Trim23-201ENSMUST00000022225 Ofd1Q80Z25 1017 aa16.56■□□□□ 0.24
Trim23-201ENSMUST00000022225 CntlnA2AM05 1397 aa16.55■□□□□ 0.24
Trim23-201ENSMUST00000022225 Fhod3Q76LL6 1578 aa16.55■□□□□ 0.24
Trim23-201ENSMUST00000022225 Disp1Q3TDN0 1521 aa16.54■□□□□ 0.24
Trim23-201ENSMUST00000022225 Peg3Q3URU2 1571 aa16.53■□□□□ 0.24
Trim23-201ENSMUST00000022225 Iqgap2Q3UQ44 1575 aa16.52■□□□□ 0.23
Trim23-201ENSMUST00000022225 Mroh2bQ7M6Y6 1581 aa16.51■□□□□ 0.23
Trim23-201ENSMUST00000022225 Lmod2Q3UHZ5 550 aa16.51■□□□□ 0.23
Trim23-201ENSMUST00000022225 Pdcl3Q8BVF2 240 aa16.51■□□□□ 0.23
Trim23-201ENSMUST00000022225 Nkx1-2P42580 305 aa16.5■□□□□ 0.23
Trim23-201ENSMUST00000022225 Camsap1A2AHC3 1581 aa16.49■□□□□ 0.23
Trim23-201ENSMUST00000022225 Gm7298A0A0N4SVU1 1476 aa16.47■□□□□ 0.23
Trim23-201ENSMUST00000022225 Kank1E9Q238 1360 aa16.47■□□□□ 0.23
Trim23-201ENSMUST00000022225 A2mQ6GQT1 1474 aa16.46■□□□□ 0.23
Trim23-201ENSMUST00000022225 Erbb3Q61526 1339 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms