RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Hsp90aa1P07901 733 aaKnown RBP11.15□□□□□ -0.63
Ssr1-201ENSMUST00000021864 Pabpn1Q8CCS6 302 aaKnown RBP11.14□□□□□ -0.63
Ssr1-201ENSMUST00000021864 ClspnQ80YR7 1315 aa11.14□□□□□ -0.63
Ssr1-201ENSMUST00000021864 Anp32aO35381 247 aa11.14□□□□□ -0.63
Ssr1-201ENSMUST00000021864 Iqgap2Q3UQ44 1575 aa11.13□□□□□ -0.63
Ssr1-201ENSMUST00000021864 Prdm10Q3UTQ7 1184 aa11.13□□□□□ -0.63
Ssr1-201ENSMUST00000021864 Fmn1Q05860 1466 aa11.11□□□□□ -0.63
Ssr1-201ENSMUST00000021864 BlmO88700 1416 aa11.1□□□□□ -0.63
Ssr1-201ENSMUST00000021864 Smarca2Q6DIC0 1577 aa11.1□□□□□ -0.63
Ssr1-201ENSMUST00000021864 Clstn2Q9ER65 966 aa11.1□□□□□ -0.63
Ssr1-201ENSMUST00000021864 Ccer2J3QPU5 274 aa11.09□□□□□ -0.63
Ssr1-201ENSMUST00000021864 CatipB9EKE5 520 aa11.08□□□□□ -0.64
Ssr1-201ENSMUST00000021864 Upf2A2AT37 1269 aaKnown RBP11.07□□□□□ -0.64
Ssr1-201ENSMUST00000021864 MyclP10166 368 aa11.06□□□□□ -0.64
Ssr1-201ENSMUST00000021864 LrpprcQ6PB66 1392 aaKnown RBP11.06□□□□□ -0.64
Ssr1-201ENSMUST00000021864 Dhx29Q6PGC1 1365 aaKnown RBP11.06□□□□□ -0.64
Ssr1-201ENSMUST00000021864 Arid3cA6PWV5 409 aa11.05□□□□□ -0.64
Ssr1-201ENSMUST00000021864 Chic2Q9D9G3 165 aa11.05□□□□□ -0.64
Ssr1-201ENSMUST00000021864 Synj1Q8CHC4 1574 aa11.04□□□□□ -0.64
Ssr1-201ENSMUST00000021864 Supt5hO55201 1082 aaKnown RBP11.03□□□□□ -0.64
Ssr1-201ENSMUST00000021864 Znf326O88291 580 aa11.01□□□□□ -0.65
Ssr1-201ENSMUST00000021864 Eea1Q8BL66 1411 aa11□□□□□ -0.65
Ssr1-201ENSMUST00000021864 Cttnbp2B9EJA2 1648 aa11□□□□□ -0.65
Ssr1-201ENSMUST00000021864 ArxO35085 564 aa10.99□□□□□ -0.65
Ssr1-201ENSMUST00000021864 Mrc2Q64449 1479 aa10.99□□□□□ -0.65
Ssr1-201ENSMUST00000021864 Rpap1Q80TE0 1409 aa10.98□□□□□ -0.65
Ssr1-201ENSMUST00000021864 Baz1bQ9Z277 1479 aa10.98□□□□□ -0.65
Ssr1-201ENSMUST00000021864 Fgd1P52734 960 aa10.97□□□□□ -0.65
Ssr1-201ENSMUST00000021864 P3h3Q8CG70 732 aa10.97□□□□□ -0.65
Ssr1-201ENSMUST00000021864 Kif27Q7M6Z4 1394 aa10.95□□□□□ -0.66
Ssr1-201ENSMUST00000021864 MlecQ6ZQI3 291 aaKnown RBP10.95□□□□□ -0.66
Ssr1-201ENSMUST00000021864 Dnajc5bQ9CQ94 199 aa10.95□□□□□ -0.66
Ssr1-201ENSMUST00000021864 Rrp7aQ9D1C9 280 aaKnown RBP10.92□□□□□ -0.66
Ssr1-201ENSMUST00000021864 Ccdc88bQ4QRL3 1481 aa10.91□□□□□ -0.66
Ssr1-201ENSMUST00000021864 Rangap1P46061 589 aaKnown RBP10.91□□□□□ -0.66
Ssr1-201ENSMUST00000021864 BicraF8VPZ9 1578 aa10.91□□□□□ -0.66
Ssr1-201ENSMUST00000021864 Lemd3Q9WU40 921 aa10.9□□□□□ -0.66
Ssr1-201ENSMUST00000021864 Urb2E9Q7L1 1524 aaKnown RBP10.9□□□□□ -0.66
Ssr1-201ENSMUST00000021864 Frmpd1A2AKB4 1549 aa10.89□□□□□ -0.67
Ssr1-201ENSMUST00000021864 Mtus2Q3UHD3 1353 aa10.88□□□□□ -0.67
Ssr1-201ENSMUST00000021864 Carmil1Q6EDY6 1374 aa10.88□□□□□ -0.67
Ssr1-201ENSMUST00000021864 Soga1E1U8D0 1418 aa10.87□□□□□ -0.67
Ssr1-201ENSMUST00000021864 Aebp1Q640N1 1128 aa10.87□□□□□ -0.67
Ssr1-201ENSMUST00000021864 IqubQ8CDK3 788 aa10.86□□□□□ -0.67
Ssr1-201ENSMUST00000021864 DekQ7TNV0 380 aaKnown RBP10.86□□□□□ -0.67
Ssr1-201ENSMUST00000021864 Eid3Q3V124 375 aa10.86□□□□□ -0.67
Ssr1-201ENSMUST00000021864 Dhx57Q6P5D3 1388 aaKnown RBP10.84□□□□□ -0.67
Ssr1-201ENSMUST00000021864 Cc2d2aQ8CFW7 1633 aa10.84□□□□□ -0.67
Ssr1-201ENSMUST00000021864 Zfp777B9EKF4 885 aa10.83□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Mapk8ip2Q9ERE9 830 aa10.83□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Cep162Q6ZQ06 1403 aa10.83□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Rad21Q61550 635 aaKnown RBP10.83□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Csrnp3P59055 597 aa10.82□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Calr4Q3TQS0 420 aa10.79□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Jph4Q80WT0 628 aa10.79□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Wdr62Q3U3T8 1523 aa10.79□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Trim44Q9QXA7 346 aa10.79□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Efcab5A0JP43 1406 aa10.79□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Fgd6Q69ZL1 1399 aa10.77□□□□□ -0.68
Ssr1-201ENSMUST00000021864 Rsph4aQ8BYM7 716 aa10.77□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Exosc9Q9JHI7 438 aaKnown RBP10.77□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Ppp4r2Q0VGB7 417 aa10.77□□□□□ -0.69
Ssr1-201ENSMUST00000021864 PnnO35691 725 aaKnown RBP10.76□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Chmp4bQ9D8B3 224 aaKnown RBP10.76□□□□□ -0.69
Ssr1-201ENSMUST00000021864 WrnO09053 1401 aa10.74□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Stk24Q99KH8 431 aa10.74□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Srpk2O54781 681 aaKnown RBP10.74□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Mroh3A0A1D5RM54 893 aa10.74□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Lmod3E9QA62 571 aa10.74□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Trim26Q99PN3 545 aa10.73□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Ccdc9Q8VC31 543 aaKnown RBP10.73□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Iqcf3Q9D498 203 aa10.73□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Ift140E9PY46 1464 aa10.73□□□□□ -0.69
Ssr1-201ENSMUST00000021864 CntlnA2AM05 1397 aa10.73□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Ythdc1E9Q5K9 736 aaKnown RBP10.73□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Duox2A2AQ99 1517 aa10.73□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Irx6Q9ER75 438 aa10.72□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Eif4g2Q62448 906 aaKnown RBP10.72□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Hsp90ab1P11499 724 aaKnown RBP10.72□□□□□ -0.69
Ssr1-201ENSMUST00000021864 PogzQ8BZH4 1409 aaKnown RBP10.72□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Fyco1Q8VDC1 1437 aa10.72□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Rgl3Q3UYI5 709 aa10.71□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Wdr43Q6ZQL4 677 aaKnown RBP10.71□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Arid4bA2CG63 1314 aaKnown RBP10.71□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Mrs2Q5NCE8 434 aa10.71□□□□□ -0.69
Ssr1-201ENSMUST00000021864 Rad54l2Q99NG0 1466 aa10.71□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Plb1Q3TTY0 1478 aa10.7□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Cc2d2bA0A286YDU8 1405 aa10.7□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Mapk8ip3Q9ESN9 1337 aa10.7□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Vsig10D3YX43 558 aa10.69□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Kdm2aP59997 1161 aa10.69□□□□□ -0.7
Ssr1-201ENSMUST00000021864 PtmaP26350 111 aa10.69□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Trim30dE9PWL0 497 aa10.68□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Map4P27546 1125 aaKnown RBP10.67□□□□□ -0.7
Ssr1-201ENSMUST00000021864 CadpsQ80TJ1 1355 aa10.67□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Kif3bQ61771 747 aa10.67□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Gm6268A2A3U9 297 aa10.67□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Adam1bQ8R534 806 aa10.67□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Sart1Q9Z315 806 aaKnown RBP10.67□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Ncoa2Q61026 1462 aa10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms