RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Rhox8Q6VSS7 320 aa14.46□□□□□ -0.1
Ssr1-201ENSMUST00000021864 NischQ80TM9 1593 aa13.69□□□□□ -0.22
Ssr1-201ENSMUST00000021864 Rpgrip1Q9EPQ2 1331 aa13.17□□□□□ -0.3
Ssr1-201ENSMUST00000021864 Abcc9P70170 1546 aa13.14□□□□□ -0.31
Ssr1-201ENSMUST00000021864 Esf1Q3V1V3 845 aaKnown RBP13.07□□□□□ -0.32
Ssr1-201ENSMUST00000021864 Cngb1E1AZ71 1325 aa13.06□□□□□ -0.32
Ssr1-201ENSMUST00000021864 Ccdc136Q3TVA9 1136 aa12.97□□□□□ -0.33
Ssr1-201ENSMUST00000021864 Pelp1Q9DBD5 1123 aaKnown RBP12.96□□□□□ -0.33
Ssr1-201ENSMUST00000021864 Ube2uB1AUC4 352 aa12.85□□□□□ -0.35
Ssr1-201ENSMUST00000021864 Las1lA2BE28 776 aaKnown RBP12.84□□□□□ -0.35
Ssr1-201ENSMUST00000021864 Gm35339A0A140LHH9 1649 aa12.81□□□□□ -0.36
Ssr1-201ENSMUST00000021864 Trim41Q5NCC3 630 aa12.81□□□□□ -0.36
Ssr1-201ENSMUST00000021864 Zeb1Q64318 1117 aa12.73□□□□□ -0.37
Ssr1-201ENSMUST00000021864 Abcc8B2RUS7 1588 aa12.72□□□□□ -0.37
Ssr1-201ENSMUST00000021864 Wdr66E9Q743 1299 aa12.67□□□□□ -0.38
Ssr1-201ENSMUST00000021864 Ehmt2Q9Z148 1263 aaKnown RBP12.62□□□□□ -0.39
Ssr1-201ENSMUST00000021864 Npm2Q80W85 207 aa12.61□□□□□ -0.39
Ssr1-201ENSMUST00000021864 Zcchc6Q5BLK4 1491 aaKnown RBP12.54□□□□□ -0.4
Ssr1-201ENSMUST00000021864 Il27Q8K3I6 234 aa12.4□□□□□ -0.42
Ssr1-201ENSMUST00000021864 Rtl1Q7M732 1744 aa12.4□□□□□ -0.42
Ssr1-201ENSMUST00000021864 Gab3Q8BSM5 595 aa12.4□□□□□ -0.43
Ssr1-201ENSMUST00000021864 Myt1lP97500 1187 aa12.37□□□□□ -0.43
Ssr1-201ENSMUST00000021864 Stra8P70278 393 aa12.31□□□□□ -0.44
Ssr1-201ENSMUST00000021864 Amer1Q7TS75 1132 aa12.2□□□□□ -0.46
Ssr1-201ENSMUST00000021864 NacadQ5SWP3 1504 aa12.2□□□□□ -0.46
Ssr1-201ENSMUST00000021864 Ccdc180J3QNE4 1664 aa12.18□□□□□ -0.46
Ssr1-201ENSMUST00000021864 Npm1Q61937 292 aaKnown RBP12.17□□□□□ -0.46
Ssr1-201ENSMUST00000021864 NefmP08553 848 aa12.07□□□□□ -0.48
Ssr1-201ENSMUST00000021864 CenpbP27790 599 aa12.07□□□□□ -0.48
Ssr1-201ENSMUST00000021864 4930567H17RikQ3V0K5 233 aa12.06□□□□□ -0.48
Ssr1-201ENSMUST00000021864 Ubl4bQ9CQ84 188 aa12.04□□□□□ -0.48
Ssr1-201ENSMUST00000021864 Anp32bQ9EST5 272 aaKnown RBP12.03□□□□□ -0.48
Ssr1-201ENSMUST00000021864 UbtfP25976 765 aaKnown RBP12.01□□□□□ -0.49
Ssr1-201ENSMUST00000021864 Rb1cc1Q9ESK9 1588 aa11.99□□□□□ -0.49
Ssr1-201ENSMUST00000021864 Slc24a1Q91WD8 1130 aa11.99□□□□□ -0.49
Ssr1-201ENSMUST00000021864 Brd4Q9ESU6 1400 aaKnown RBP11.93□□□□□ -0.5
Ssr1-201ENSMUST00000021864 NeflP08551 543 aa11.92□□□□□ -0.5
Ssr1-201ENSMUST00000021864 Os9Q8K2C7 672 aa11.9□□□□□ -0.5
Ssr1-201ENSMUST00000021864 Ercc6F8VPZ5 1481 aa11.88□□□□□ -0.51
Ssr1-201ENSMUST00000021864 NrdcQ8BHG1 1161 aa11.88□□□□□ -0.51
Ssr1-201ENSMUST00000021864 Kdm5dQ62240 1548 aa11.88□□□□□ -0.51
Ssr1-201ENSMUST00000021864 HrcG5E8J6 738 aa11.82□□□□□ -0.52
Ssr1-201ENSMUST00000021864 Acin1Q9JIX8 1338 aaKnown RBP11.81□□□□□ -0.52
Ssr1-201ENSMUST00000021864 Pds5bQ4VA53 1446 aaKnown RBP11.78□□□□□ -0.52
Ssr1-201ENSMUST00000021864 Fam50aQ9WV03 339 aaKnown RBP11.77□□□□□ -0.53
Ssr1-201ENSMUST00000021864 Ap3b1Q9Z1T1 1105 aa11.76□□□□□ -0.53
Ssr1-201ENSMUST00000021864 Ttbk1Q6PCN3 1308 aa11.76□□□□□ -0.53
Ssr1-201ENSMUST00000021864 Baz1aO88379 1555 aa11.74□□□□□ -0.53
Ssr1-201ENSMUST00000021864 Ifnlr1Q8CGK5 535 aa11.74□□□□□ -0.53
Ssr1-201ENSMUST00000021864 NclP09405 707 aaKnown RBP11.73□□□□□ -0.53
Ssr1-201ENSMUST00000021864 Tnnt3Q9QZ47 272 aa11.73□□□□□ -0.53
Ssr1-201ENSMUST00000021864 4933416C03RikQ3V063 378 aa11.72□□□□□ -0.53
Ssr1-201ENSMUST00000021864 Dcaf1Q80TR8 1506 aa11.72□□□□□ -0.53
Ssr1-201ENSMUST00000021864 Neurod1Q60867 357 aa11.71□□□□□ -0.53
Ssr1-201ENSMUST00000021864 Cdk11bP24788 784 aaKnown RBP11.68□□□□□ -0.54
Ssr1-201ENSMUST00000021864 Sycp2Q9CUU3 1500 aa11.66□□□□□ -0.54
Ssr1-201ENSMUST00000021864 Rsf1E9PWW9 1441 aaKnown RBP11.66□□□□□ -0.54
Ssr1-201ENSMUST00000021864 Kif15Q6P9L6 1387 aa11.64□□□□□ -0.55
Ssr1-201ENSMUST00000021864 Gm13697A2AK42 830 aa11.63□□□□□ -0.55
Ssr1-201ENSMUST00000021864 Fkbp15Q6P9Q6 1216 aaKnown RBP11.6□□□□□ -0.55
Ssr1-201ENSMUST00000021864 Eif5bQ05D44 1216 aaKnown RBP11.58□□□□□ -0.56
Ssr1-201ENSMUST00000021864 Myt1Q8CFC2 1127 aa11.55□□□□□ -0.56
Ssr1-201ENSMUST00000021864 Hdac5Q9Z2V6 1113 aa11.54□□□□□ -0.56
Ssr1-201ENSMUST00000021864 ScribQ80U72 1612 aa11.52□□□□□ -0.57
Ssr1-201ENSMUST00000021864 Cep164Q5DU05 1446 aa11.52□□□□□ -0.57
Ssr1-201ENSMUST00000021864 Plppr3Q7TPB0 716 aa11.52□□□□□ -0.57
Ssr1-201ENSMUST00000021864 Lmod2Q3UHZ5 550 aa11.51□□□□□ -0.57
Ssr1-201ENSMUST00000021864 Ccdc18Q640L5 1455 aa11.5□□□□□ -0.57
Ssr1-201ENSMUST00000021864 TonslQ6NZL6 1363 aa11.49□□□□□ -0.57
Ssr1-201ENSMUST00000021864 Nop58Q6DFW4 536 aaKnown RBP11.49□□□□□ -0.57
Ssr1-201ENSMUST00000021864 Rtl5Q5DTT4 599 aa11.47□□□□□ -0.57
Ssr1-201ENSMUST00000021864 Hnrnpul2Q00PI9 745 aaKnown RBP11.47□□□□□ -0.57
Ssr1-201ENSMUST00000021864 DiexfQ8BTT6 772 aaKnown RBP11.45□□□□□ -0.58
Ssr1-201ENSMUST00000021864 Atad2bE9Q166 1460 aaKnown RBP11.45□□□□□ -0.58
Ssr1-201ENSMUST00000021864 Phldb1Q6PDH0 1371 aaKnown RBP11.43□□□□□ -0.58
Ssr1-201ENSMUST00000021864 Atp1b4Q99ME6 356 aa11.43□□□□□ -0.58
Ssr1-201ENSMUST00000021864 Gm13695A2AK44 830 aa11.42□□□□□ -0.58
Ssr1-201ENSMUST00000021864 Zbtb7cQ8VCZ7 619 aa11.42□□□□□ -0.58
Ssr1-201ENSMUST00000021864 Chic1Q8CBW7 227 aa11.41□□□□□ -0.58
Ssr1-201ENSMUST00000021864 Nlrp6Q91WS2 869 aa11.4□□□□□ -0.58
Ssr1-201ENSMUST00000021864 Crybg2B7ZCC2 1516 aa11.38□□□□□ -0.59
Ssr1-201ENSMUST00000021864 Golga3P55937 1487 aa11.38□□□□□ -0.59
Ssr1-201ENSMUST00000021864 Erich6D3Z6S9 713 aa11.35□□□□□ -0.59
Ssr1-201ENSMUST00000021864 Safb2Q80YR5 991 aaKnown RBP11.32□□□□□ -0.6
Ssr1-201ENSMUST00000021864 Plekhg3Q4VAC9 1341 aa11.32□□□□□ -0.6
Ssr1-201ENSMUST00000021864 Arhgap27A2AB59 869 aa11.31□□□□□ -0.6
Ssr1-201ENSMUST00000021864 Cux2P70298 1426 aa11.29□□□□□ -0.6
Ssr1-201ENSMUST00000021864 Clip1Q922J3 1391 aa11.28□□□□□ -0.6
Ssr1-201ENSMUST00000021864 Smarca4Q3TKT4 1613 aaKnown RBP11.24□□□□□ -0.61
Ssr1-201ENSMUST00000021864 Pcgf6Q99NA9 353 aa11.23□□□□□ -0.61
Ssr1-201ENSMUST00000021864 Polr3glQ8R0C0 218 aa11.23□□□□□ -0.61
Ssr1-201ENSMUST00000021864 Cecr2E9Q2Z1 1453 aa11.21□□□□□ -0.61
Ssr1-201ENSMUST00000021864 CftrP26361 1476 aa11.21□□□□□ -0.62
Ssr1-201ENSMUST00000021864 Ppp1r18Q8BQ30 594 aa11.21□□□□□ -0.62
Ssr1-201ENSMUST00000021864 Ppargc1bQ8VHJ7 1014 aa11.17□□□□□ -0.62
Ssr1-201ENSMUST00000021864 DaxxO35613 739 aa11.17□□□□□ -0.62
Ssr1-201ENSMUST00000021864 AknaQ80VW7 1404 aa11.16□□□□□ -0.62
Ssr1-201ENSMUST00000021864 Zbtb4Q5F293 982 aa11.16□□□□□ -0.62
Ssr1-201ENSMUST00000021864 Setd5Q5XJV7 1441 aa11.15□□□□□ -0.62
Ssr1-201ENSMUST00000021864 Mier1Q5UAK0 511 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms