RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 DaxxO35613 739 aa19.06■□□□□ 0.64
Trim27-201ENSMUST00000021761 Ifnlr1Q8CGK5 535 aa19.04■□□□□ 0.64
Trim27-201ENSMUST00000021761 ScribQ80U72 1612 aa19.04■□□□□ 0.64
Trim27-201ENSMUST00000021761 Kif15Q6P9L6 1387 aa19.03■□□□□ 0.64
Trim27-201ENSMUST00000021761 Rad21Q61550 635 aaKnown RBP19.01■□□□□ 0.63
Trim27-201ENSMUST00000021761 Erich6D3Z6S9 713 aa18.99■□□□□ 0.63
Trim27-201ENSMUST00000021761 Sin3aQ60520 1274 aaKnown RBP18.98■□□□□ 0.63
Trim27-201ENSMUST00000021761 ArxO35085 564 aa18.97■□□□□ 0.63
Trim27-201ENSMUST00000021761 Smarca2Q6DIC0 1577 aa18.94■□□□□ 0.62
Trim27-201ENSMUST00000021761 Rgl3Q3UYI5 709 aa18.94■□□□□ 0.62
Trim27-201ENSMUST00000021761 Wwc2Q6NXJ0 1187 aa18.89■□□□□ 0.61
Trim27-201ENSMUST00000021761 CftrP26361 1476 aa18.89■□□□□ 0.61
Trim27-201ENSMUST00000021761 Rapgef2Q8CHG7 1496 aa18.88■□□□□ 0.61
Trim27-201ENSMUST00000021761 Sycp2Q9CUU3 1500 aa18.85■□□□□ 0.61
Trim27-201ENSMUST00000021761 Slc4a3P16283 1227 aa18.85■□□□□ 0.61
Trim27-201ENSMUST00000021761 Polr3glQ8R0C0 218 aa18.85■□□□□ 0.61
Trim27-201ENSMUST00000021761 Grwd1Q810D6 446 aaKnown RBP18.84■□□□□ 0.61
Trim27-201ENSMUST00000021761 Synj1Q8CHC4 1574 aa18.83■□□□□ 0.6
Trim27-201ENSMUST00000021761 Ofd1Q80Z25 1017 aa18.81■□□□□ 0.6
Trim27-201ENSMUST00000021761 Fmn1Q05860 1466 aa18.81■□□□□ 0.6
Trim27-201ENSMUST00000021761 Nlrp6Q91WS2 869 aa18.79■□□□□ 0.6
Trim27-201ENSMUST00000021761 Rangap1P46061 589 aaKnown RBP18.78■□□□□ 0.6
Trim27-201ENSMUST00000021761 Crybg2B7ZCC2 1516 aa18.78■□□□□ 0.6
Trim27-201ENSMUST00000021761 Gm13697A2AK42 830 aa18.77■□□□□ 0.59
Trim27-201ENSMUST00000021761 Bcl11aQ9QYE3 773 aa18.67■□□□□ 0.58
Trim27-201ENSMUST00000021761 Nolc1E9Q5C9 702 aaKnown RBP18.65■□□□□ 0.58
Trim27-201ENSMUST00000021761 Ccdc18Q640L5 1455 aa18.65■□□□□ 0.58
Trim27-201ENSMUST00000021761 Exoc6Q8R313 802 aa18.63■□□□□ 0.57
Trim27-201ENSMUST00000021761 Apbb1Q9QXJ1 710 aa18.63■□□□□ 0.57
Trim27-201ENSMUST00000021761 Aebp1Q640N1 1128 aa18.63■□□□□ 0.57
Trim27-201ENSMUST00000021761 Card11Q8CIS0 1159 aa18.62■□□□□ 0.57
Trim27-201ENSMUST00000021761 Baz1bQ9Z277 1479 aa18.62■□□□□ 0.57
Trim27-201ENSMUST00000021761 Supt16hQ920B9 1047 aa18.62■□□□□ 0.57
Trim27-201ENSMUST00000021761 Atp1b4Q99ME6 356 aa18.62■□□□□ 0.57
Trim27-201ENSMUST00000021761 Mia2Q91ZV0 1396 aa18.59■□□□□ 0.57
Trim27-201ENSMUST00000021761 Pkd2O35245 966 aa18.59■□□□□ 0.57
Trim27-201ENSMUST00000021761 CanxP35564 591 aaKnown RBP18.56■□□□□ 0.56
Trim27-201ENSMUST00000021761 Arhgap27A2AB59 869 aa18.56■□□□□ 0.56
Trim27-201ENSMUST00000021761 Cabp1Q9JLK7 227 aa18.56■□□□□ 0.56
Trim27-201ENSMUST00000021761 Upf2A2AT37 1269 aaKnown RBP18.55■□□□□ 0.56
Trim27-201ENSMUST00000021761 Kdm2aP59997 1161 aa18.55■□□□□ 0.56
Trim27-201ENSMUST00000021761 Trim26Q99PN3 545 aa18.55■□□□□ 0.56
Trim27-201ENSMUST00000021761 Dbr1Q923B1 550 aa18.54■□□□□ 0.56
Trim27-201ENSMUST00000021761 Mphosph9A6H5Y1 991 aa18.52■□□□□ 0.56
Trim27-201ENSMUST00000021761 B4galnt3Q6L8S8 986 aa18.5■□□□□ 0.55
Trim27-201ENSMUST00000021761 Hsp90aa1P07901 733 aaKnown RBP18.5■□□□□ 0.55
Trim27-201ENSMUST00000021761 Trim30dE9PWL0 497 aa18.48■□□□□ 0.55
Trim27-201ENSMUST00000021761 Neurod2Q62414 383 aa18.48■□□□□ 0.55
Trim27-201ENSMUST00000021761 Rundc1Q0VDN7 615 aa18.48■□□□□ 0.55
Trim27-201ENSMUST00000021761 Cwc22Q8C5N3 908 aaKnown RBP18.46■□□□□ 0.55
Trim27-201ENSMUST00000021761 Ccdc27Q3V036 639 aa18.44■□□□□ 0.54
Trim27-201ENSMUST00000021761 Mtus2Q3UHD3 1353 aa18.44■□□□□ 0.54
Trim27-201ENSMUST00000021761 Znf710Q3U288 666 aa18.43■□□□□ 0.54
Trim27-201ENSMUST00000021761 Trak1Q6PD31 939 aa18.43■□□□□ 0.54
Trim27-201ENSMUST00000021761 Rrp7aQ9D1C9 280 aaKnown RBP18.43■□□□□ 0.54
Trim27-201ENSMUST00000021761 Kif27Q7M6Z4 1394 aa18.42■□□□□ 0.54
Trim27-201ENSMUST00000021761 Ercc6F8VPZ5 1481 aa18.42■□□□□ 0.54
Trim27-201ENSMUST00000021761 Clstn2Q9ER65 966 aa18.42■□□□□ 0.54
Trim27-201ENSMUST00000021761 Fyco1Q8VDC1 1437 aa18.41■□□□□ 0.54
Trim27-201ENSMUST00000021761 Arhgap35Q91YM2 1499 aa18.4■□□□□ 0.54
Trim27-201ENSMUST00000021761 Mroh3A0A1D5RM54 893 aa18.4■□□□□ 0.54
Trim27-201ENSMUST00000021761 CntlnA2AM05 1397 aa18.38■□□□□ 0.53
Trim27-201ENSMUST00000021761 Smg6P61406 1418 aaKnown RBP18.36■□□□□ 0.53
Trim27-201ENSMUST00000021761 Arid4bA2CG63 1314 aaKnown RBP18.35■□□□□ 0.53
Trim27-201ENSMUST00000021761 Tcerg1Q8CGF7 1100 aaKnown RBP18.34■□□□□ 0.53
Trim27-201ENSMUST00000021761 Hsp90ab1P11499 724 aaKnown RBP18.34■□□□□ 0.53
Trim27-201ENSMUST00000021761 Armcx1Q9CX83 456 aa18.33■□□□□ 0.53
Trim27-201ENSMUST00000021761 Pds5bQ4VA53 1446 aaKnown RBP18.33■□□□□ 0.52
Trim27-201ENSMUST00000021761 Vsig10D3YX43 558 aa18.32■□□□□ 0.52
Trim27-201ENSMUST00000021761 Gm13695A2AK44 830 aa18.32■□□□□ 0.52
Trim27-201ENSMUST00000021761 Map4P27546 1125 aaKnown RBP18.31■□□□□ 0.52
Trim27-201ENSMUST00000021761 4930567H17RikQ3V0K5 233 aa18.31■□□□□ 0.52
Trim27-201ENSMUST00000021761 Cc2d2aQ8CFW7 1633 aa18.31■□□□□ 0.52
Trim27-201ENSMUST00000021761 Cttnbp2B9EJA2 1648 aa18.31■□□□□ 0.52
Trim27-201ENSMUST00000021761 Ccnb3Q810T2 1396 aa18.3■□□□□ 0.52
Trim27-201ENSMUST00000021761 Cux2P70298 1426 aa18.3■□□□□ 0.52
Trim27-201ENSMUST00000021761 Ecm2Q5FW85 670 aa18.29■□□□□ 0.52
Trim27-201ENSMUST00000021761 Smarca4Q3TKT4 1613 aaKnown RBP18.29■□□□□ 0.52
Trim27-201ENSMUST00000021761 Rpap1Q80TE0 1409 aa18.29■□□□□ 0.52
Trim27-201ENSMUST00000021761 Cnga1P29974 684 aa18.27■□□□□ 0.52
Trim27-201ENSMUST00000021761 Spryd3E9Q9B3 442 aa18.26■□□□□ 0.51
Trim27-201ENSMUST00000021761 Ncapd3Q6ZQK0 1506 aa18.26■□□□□ 0.51
Trim27-201ENSMUST00000021761 Hdac5Q9Z2V6 1113 aa18.25■□□□□ 0.51
Trim27-201ENSMUST00000021761 ChgaP26339 463 aaKnown RBP18.25■□□□□ 0.51
Trim27-201ENSMUST00000021761 Zscan21Q07231 555 aa18.25■□□□□ 0.51
Trim27-201ENSMUST00000021761 Gm20521D3Z5F7 333 aa18.24■□□□□ 0.51
Trim27-201ENSMUST00000021761 Carmil1Q6EDY6 1374 aa18.24■□□□□ 0.51
Trim27-201ENSMUST00000021761 Ifit1bl1D3Z6F0 470 aa18.23■□□□□ 0.51
Trim27-201ENSMUST00000021761 Arap1Q4LDD4 1452 aa18.22■□□□□ 0.51
Trim27-201ENSMUST00000021761 Usp47Q8BY87 1376 aa18.22■□□□□ 0.51
Trim27-201ENSMUST00000021761 Stk24Q99KH8 431 aa18.22■□□□□ 0.51
Trim27-201ENSMUST00000021761 Chmp5Q9D7S9 219 aa18.22■□□□□ 0.51
Trim27-201ENSMUST00000021761 Plppr3Q7TPB0 716 aa18.21■□□□□ 0.51
Trim27-201ENSMUST00000021761 Zfp644E9QA22 1323 aa18.21■□□□□ 0.51
Trim27-201ENSMUST00000021761 Top2aQ01320 1528 aaKnown RBP18.21■□□□□ 0.51
Trim27-201ENSMUST00000021761 DekQ7TNV0 380 aaKnown RBP18.2■□□□□ 0.5
Trim27-201ENSMUST00000021761 Mak16Q8BGS0 296 aaKnown RBP18.18■□□□□ 0.5
Trim27-201ENSMUST00000021761 Atad2bE9Q166 1460 aaKnown RBP18.18■□□□□ 0.5
Trim27-201ENSMUST00000021761 PtprkP35822 1457 aa18.18■□□□□ 0.5
Trim27-201ENSMUST00000021761 Ccdc9Q8VC31 543 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms