RNA–Protein interactions for RNA: ENSMUST00000021046.5

Ddx42-201, Transcript of ATP-dependent RNA helicase DDX42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx42, Length 4,011 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42-201ENSMUST00000021046 Anp32bQ9EST5 272 aaKnown RBP18.57■□□□□ 0.56
Ddx42-201ENSMUST00000021046 Abcc8B2RUS7 1588 aa18.54■□□□□ 0.56
Ddx42-201ENSMUST00000021046 AU015836B2RUM3 263 aa18.53■□□□□ 0.56
Ddx42-201ENSMUST00000021046 Ccer2J3QPU5 274 aa18.51■□□□□ 0.55
Ddx42-201ENSMUST00000021046 Znf692Q3U381 531 aa18.49■□□□□ 0.55
Ddx42-201ENSMUST00000021046 ChgaP26339 463 aaKnown RBP18.47■□□□□ 0.55
Ddx42-201ENSMUST00000021046 Ythdc1E9Q5K9 736 aaKnown RBP18.46■□□□□ 0.55
Ddx42-201ENSMUST00000021046 Tcerg1Q8CGF7 1100 aaKnown RBP18.4■□□□□ 0.54
Ddx42-201ENSMUST00000021046 Spryd3E9Q9B3 442 aa18.4■□□□□ 0.54
Ddx42-201ENSMUST00000021046 IbspQ61711 324 aa18.39■□□□□ 0.53
Ddx42-201ENSMUST00000021046 Lmod3E9QA62 571 aa18.37■□□□□ 0.53
Ddx42-201ENSMUST00000021046 Rsf1E9PWW9 1441 aaKnown RBP18.37■□□□□ 0.53
Ddx42-201ENSMUST00000021046 Pdcl3Q8BVF2 240 aa18.36■□□□□ 0.53
Ddx42-201ENSMUST00000021046 Clip1Q922J3 1391 aa18.34■□□□□ 0.53
Ddx42-201ENSMUST00000021046 Dnttip2Q8R2M2 758 aaKnown RBP18.34■□□□□ 0.53
Ddx42-201ENSMUST00000021046 Zfp777B9EKF4 885 aa18.31■□□□□ 0.52
Ddx42-201ENSMUST00000021046 Ofd1Q80Z25 1017 aa18.27■□□□□ 0.52
Ddx42-201ENSMUST00000021046 Sin3aQ60520 1274 aaKnown RBP18.23■□□□□ 0.51
Ddx42-201ENSMUST00000021046 Gtf3c5Q8R2T8 520 aa18.23■□□□□ 0.51
Ddx42-201ENSMUST00000021046 Iqcf3Q9D498 203 aa18.22■□□□□ 0.51
Ddx42-201ENSMUST00000021046 AampJ3QN89 436 aa18.22■□□□□ 0.51
Ddx42-201ENSMUST00000021046 B4galnt3Q6L8S8 986 aa18.22■□□□□ 0.51
Ddx42-201ENSMUST00000021046 Trim44Q9QXA7 346 aa18.21■□□□□ 0.51
Ddx42-201ENSMUST00000021046 Wwc2Q6NXJ0 1187 aa18.21■□□□□ 0.51
Ddx42-201ENSMUST00000021046 BccipQ9CWI3 316 aa18.2■□□□□ 0.5
Ddx42-201ENSMUST00000021046 Dbr1Q923B1 550 aa18.18■□□□□ 0.5
Ddx42-201ENSMUST00000021046 Rad21Q61550 635 aaKnown RBP18.17■□□□□ 0.5
Ddx42-201ENSMUST00000021046 Lmod2Q3UHZ5 550 aa18.17■□□□□ 0.5
Ddx42-201ENSMUST00000021046 Washc2Q6PGL7 1334 aa18.16■□□□□ 0.5
Ddx42-201ENSMUST00000021046 Armcx1Q9CX83 456 aa18.16■□□□□ 0.5
Ddx42-201ENSMUST00000021046 Gtf2a1Q99PM3 378 aa18.15■□□□□ 0.5
Ddx42-201ENSMUST00000021046 Trim30dE9PWL0 497 aa18.14■□□□□ 0.5
Ddx42-201ENSMUST00000021046 Tnnt2P50752 301 aa18.14■□□□□ 0.49
Ddx42-201ENSMUST00000021046 DmtnQ9WV69 405 aa18.14■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Dnai1Q8C0M8 701 aa18.13■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Hsp90ab1P11499 724 aaKnown RBP18.13■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Vsig10D3YX43 558 aa18.12■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Znf316Q6PGE4 1016 aa18.12■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Sart3Q9JLI8 962 aaKnown RBP18.12■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Ppm1gQ61074 542 aa18.11■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Rrp9Q91WM3 475 aaKnown RBP18.11■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Gm13697A2AK42 830 aa18.1■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Liat1Q810M6 228 aa18.1■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Htatsf1Q8BGC0 757 aa18.09■□□□□ 0.49
Ddx42-201ENSMUST00000021046 Plppr3Q7TPB0 716 aa18.06■□□□□ 0.48
Ddx42-201ENSMUST00000021046 Hspa5P20029 655 aaKnown RBP18.05■□□□□ 0.48
Ddx42-201ENSMUST00000021046 DekQ7TNV0 380 aaKnown RBP18.03■□□□□ 0.48
Ddx42-201ENSMUST00000021046 Trim26Q99PN3 545 aa18.01■□□□□ 0.47
Ddx42-201ENSMUST00000021046 Ccdc88bQ4QRL3 1481 aa18.01■□□□□ 0.47
Ddx42-201ENSMUST00000021046 Rrp12Q6P5B0 1295 aaKnown RBP18■□□□□ 0.47
Ddx42-201ENSMUST00000021046 Exoc6Q8R313 802 aa18■□□□□ 0.47
Ddx42-201ENSMUST00000021046 Kcnh8P59111 1102 aa17.97■□□□□ 0.47
Ddx42-201ENSMUST00000021046 Arid4bA2CG63 1314 aaKnown RBP17.96■□□□□ 0.47
Ddx42-201ENSMUST00000021046 Plcb2A3KGF7 1181 aa17.96■□□□□ 0.47
Ddx42-201ENSMUST00000021046 Egfem1Q8C088 590 aa17.96■□□□□ 0.47
Ddx42-201ENSMUST00000021046 Smg6P61406 1418 aaKnown RBP17.95■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Vgll3P85442 326 aa17.95■□□□□ 0.46
Ddx42-201ENSMUST00000021046 TimelessQ9R1X4 1197 aa17.95■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Arhgap27A2AB59 869 aa17.93■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Stard8Q8K031 1019 aa17.92■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Rb1cc1Q9ESK9 1588 aa17.91■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Mre11Q61216 706 aa17.9■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Rpap1Q80TE0 1409 aa17.9■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Rbm10Q99KG3 930 aaKnown RBP17.89■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Chmp5Q9D7S9 219 aa17.89■□□□□ 0.46
Ddx42-201ENSMUST00000021046 Apbb1Q9QXJ1 710 aa17.89■□□□□ 0.45
Ddx42-201ENSMUST00000021046 Fbxo2Q80UW2 297 aa17.87■□□□□ 0.45
Ddx42-201ENSMUST00000021046 Gm6268A2A3U9 297 aa17.84■□□□□ 0.45
Ddx42-201ENSMUST00000021046 SlkO54988 1233 aa17.83■□□□□ 0.45
Ddx42-201ENSMUST00000021046 Chrna2Q91X60 512 aa17.82■□□□□ 0.44
Ddx42-201ENSMUST00000021046 Paxip1Q6NZQ4 1056 aa17.82■□□□□ 0.44
Ddx42-201ENSMUST00000021046 NgefQ8CHT1 710 aa17.82■□□□□ 0.44
Ddx42-201ENSMUST00000021046 Erich6bQ9D4S6 220 aa17.82■□□□□ 0.44
Ddx42-201ENSMUST00000021046 EspnQ9ET47 871 aa17.8■□□□□ 0.44
Ddx42-201ENSMUST00000021046 Polr3glQ8R0C0 218 aa17.79■□□□□ 0.44
Ddx42-201ENSMUST00000021046 Eif2s2Q99L45 331 aaKnown RBP17.78■□□□□ 0.44
Ddx42-201ENSMUST00000021046 Fam43aQ8BUP8 424 aa17.78■□□□□ 0.44
Ddx42-201ENSMUST00000021046 BlmO88700 1416 aa17.77■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Znf326O88291 580 aa17.76■□□□□ 0.43
Ddx42-201ENSMUST00000021046 PtmaP26350 111 aa17.76■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Ddrgk1Q80WW9 315 aa17.76■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Chic2Q9D9G3 165 aa17.76■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Brd4Q9ESU6 1400 aaKnown RBP17.75■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Gm35339A0A140LHH9 1649 aa17.75■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Golga3P55937 1487 aa17.75■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Mroh3A0A1D5RM54 893 aa17.75■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Ttll13A4Q9F6 804 aa17.75■□□□□ 0.43
Ddx42-201ENSMUST00000021046 NudcO35685 332 aaKnown RBP17.75■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Slc4a2P13808 1237 aaKnown RBP17.73■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Phf14Q9D4H9 881 aa17.73■□□□□ 0.43
Ddx42-201ENSMUST00000021046 VgfQ0VGU4 617 aa17.73■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Gm13695A2AK44 830 aa17.72■□□□□ 0.43
Ddx42-201ENSMUST00000021046 CatipB9EKE5 520 aa17.72■□□□□ 0.43
Ddx42-201ENSMUST00000021046 4933402E13RikQ9D4D2 429 aa17.72■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Ipo8Q7TMY7 1010 aa17.71■□□□□ 0.43
Ddx42-201ENSMUST00000021046 Zfp91Q62511 572 aa17.7■□□□□ 0.42
Ddx42-201ENSMUST00000021046 Dusp27Q148W8 1138 aa17.69■□□□□ 0.42
Ddx42-201ENSMUST00000021046 Kcnn1Q9EQR3 537 aa17.64■□□□□ 0.41
Ddx42-201ENSMUST00000021046 MsnP26041 577 aaKnown RBP17.63■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Setd5Q5XJV7 1441 aa17.63■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms