RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Ubl4bQ9CQ84 188 aa16.46■□□□□ 0.22
Sdc1-201ENSMUST00000020911 PtprkP35822 1457 aa16.43■□□□□ 0.22
Sdc1-201ENSMUST00000020911 Npm1Q61937 292 aaKnown RBP16.39■□□□□ 0.21
Sdc1-201ENSMUST00000020911 TnnQ80Z71 1560 aa16.39■□□□□ 0.21
Sdc1-201ENSMUST00000020911 Upf2A2AT37 1269 aaKnown RBP16.36■□□□□ 0.21
Sdc1-201ENSMUST00000020911 Supt16hQ920B9 1047 aa16.36■□□□□ 0.21
Sdc1-201ENSMUST00000020911 Lamc3Q9R0B6 1581 aa16.35■□□□□ 0.21
Sdc1-201ENSMUST00000020911 Ccdc18Q640L5 1455 aa16.33■□□□□ 0.21
Sdc1-201ENSMUST00000020911 Unc13aQ4KUS2 1712 aa16.32■□□□□ 0.2
Sdc1-201ENSMUST00000020911 Arhgap35Q91YM2 1499 aa16.31■□□□□ 0.2
Sdc1-201ENSMUST00000020911 Phldb1Q6PDH0 1371 aaKnown RBP16.31■□□□□ 0.2
Sdc1-201ENSMUST00000020911 Cux2P70298 1426 aa16.3■□□□□ 0.2
Sdc1-201ENSMUST00000020911 Irx3P81067 507 aa16.29■□□□□ 0.2
Sdc1-201ENSMUST00000020911 Camsap1A2AHC3 1581 aa16.29■□□□□ 0.2
Sdc1-201ENSMUST00000020911 Setd5Q5XJV7 1441 aa16.26■□□□□ 0.19
Sdc1-201ENSMUST00000020911 Shroom4Q1W617 1475 aa16.24■□□□□ 0.19
Sdc1-201ENSMUST00000020911 Thoc2B1AZI6 1594 aaKnown RBP16.24■□□□□ 0.19
Sdc1-201ENSMUST00000020911 TonslQ6NZL6 1363 aa16.23■□□□□ 0.19
Sdc1-201ENSMUST00000020911 Eea1Q8BL66 1411 aa16.23■□□□□ 0.19
Sdc1-201ENSMUST00000020911 Lmod2Q3UHZ5 550 aa16.21■□□□□ 0.19
Sdc1-201ENSMUST00000020911 NrkQ9R0G8 1455 aa16.21■□□□□ 0.19
Sdc1-201ENSMUST00000020911 Baz1bQ9Z277 1479 aa16.21■□□□□ 0.19
Sdc1-201ENSMUST00000020911 Eif4g1Q6NZJ6 1600 aaKnown RBP16.2■□□□□ 0.18
Sdc1-201ENSMUST00000020911 Grin2bQ01097 1482 aa16.2■□□□□ 0.18
Sdc1-201ENSMUST00000020911 Calr4Q3TQS0 420 aa16.19■□□□□ 0.18
Sdc1-201ENSMUST00000020911 Zfp777B9EKF4 885 aa16.18■□□□□ 0.18
Sdc1-201ENSMUST00000020911 Plppr3Q7TPB0 716 aa16.17■□□□□ 0.18
Sdc1-201ENSMUST00000020911 Arap1Q4LDD4 1452 aa16.16■□□□□ 0.18
Sdc1-201ENSMUST00000020911 Ccdc27Q3V036 639 aa16.14■□□□□ 0.17
Sdc1-201ENSMUST00000020911 Ipo4Q8VI75 1082 aa16.14■□□□□ 0.17
Sdc1-201ENSMUST00000020911 Znf710Q3U288 666 aa16.12■□□□□ 0.17
Sdc1-201ENSMUST00000020911 Pak3Q61036 559 aa16.12■□□□□ 0.17
Sdc1-201ENSMUST00000020911 Ppp4r2Q0VGB7 417 aa16.12■□□□□ 0.17
Sdc1-201ENSMUST00000020911 LrpprcQ6PB66 1392 aaKnown RBP16.11■□□□□ 0.17
Sdc1-201ENSMUST00000020911 Eid3Q3V124 375 aa16.11■□□□□ 0.17
Sdc1-201ENSMUST00000020911 BlmO88700 1416 aa16.1■□□□□ 0.17
Sdc1-201ENSMUST00000020911 Mroh2bQ7M6Y6 1581 aa16.09■□□□□ 0.17
Sdc1-201ENSMUST00000020911 Fam50aQ9WV03 339 aaKnown RBP16.08■□□□□ 0.17
Sdc1-201ENSMUST00000020911 Dnajc5bQ9CQ94 199 aa16.08■□□□□ 0.16
Sdc1-201ENSMUST00000020911 Rtn4Q99P72 1162 aaKnown RBP16.08■□□□□ 0.16
Sdc1-201ENSMUST00000020911 Taok2Q6ZQ29 1240 aa16.05■□□□□ 0.16
Sdc1-201ENSMUST00000020911 Duox2A2AQ99 1517 aa16.04■□□□□ 0.16
Sdc1-201ENSMUST00000020911 Map3k1P53349 1493 aa16.04■□□□□ 0.16
Sdc1-201ENSMUST00000020911 Dhx29Q6PGC1 1365 aaKnown RBP16.02■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Arhgef5E9Q7D5 1581 aa16.01■□□□□ 0.15
Sdc1-201ENSMUST00000020911 PogzQ8BZH4 1409 aaKnown RBP16.01■□□□□ 0.15
Sdc1-201ENSMUST00000020911 4933416C03RikQ3V063 378 aa16■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Hsp90aa1P07901 733 aaKnown RBP16■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Kcnn1Q9EQR3 537 aa16■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Efcab5A0JP43 1406 aa15.99■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Fam135aQ6NS59 1506 aa15.99■□□□□ 0.15
Sdc1-201ENSMUST00000020911 AqrQ8CFQ3 1481 aaKnown RBP15.99■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Rad54l2Q99NG0 1466 aa15.98■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Ncapd3Q6ZQK0 1506 aa15.98■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Ccdc9Q8VC31 543 aaKnown RBP15.97■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Wdr43Q6ZQL4 677 aaKnown RBP15.96■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Carmil1Q6EDY6 1374 aa15.96■□□□□ 0.15
Sdc1-201ENSMUST00000020911 Znf692Q3U381 531 aa15.96■□□□□ 0.15
Sdc1-201ENSMUST00000020911 AampJ3QN89 436 aa15.95■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Ankrd26Q811D2 1581 aa15.94■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Naip1Q9QWK5 1403 aa15.94■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Cux1P53564 1515 aa15.93■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Ccer2J3QPU5 274 aa15.91■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Tiam1Q60610 1591 aa15.91■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Pcf11G3X9Z4 1553 aa15.91■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Gtf3c5Q8R2T8 520 aa15.91■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Ube2uB1AUC4 352 aa15.9■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Slc24a1Q91WD8 1130 aa15.9■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Samd9lQ69Z37 1561 aa15.9■□□□□ 0.14
Sdc1-201ENSMUST00000020911 Egfem1Q8C088 590 aa15.89■□□□□ 0.13
Sdc1-201ENSMUST00000020911 Aebp1Q640N1 1128 aa15.89■□□□□ 0.13
Sdc1-201ENSMUST00000020911 Zbtb4Q5F293 982 aa15.89■□□□□ 0.13
Sdc1-201ENSMUST00000020911 Liat1Q810M6 228 aa15.88■□□□□ 0.13
Sdc1-201ENSMUST00000020911 Slx4Q6P1D7 1565 aa15.87■□□□□ 0.13
Sdc1-201ENSMUST00000020911 NgefQ8CHT1 710 aa15.87■□□□□ 0.13
Sdc1-201ENSMUST00000020911 DaxxO35613 739 aa15.87■□□□□ 0.13
Sdc1-201ENSMUST00000020911 Stra8P70278 393 aa15.85■□□□□ 0.13
Sdc1-201ENSMUST00000020911 Mrc2Q64449 1479 aa15.83■□□□□ 0.13
Sdc1-201ENSMUST00000020911 SynmQ70IV5 1561 aa15.83■□□□□ 0.12
Sdc1-201ENSMUST00000020911 Eif5bQ05D44 1216 aaKnown RBP15.83■□□□□ 0.12
Sdc1-201ENSMUST00000020911 CntlnA2AM05 1397 aa15.82■□□□□ 0.12
Sdc1-201ENSMUST00000020911 Kif21aQ9QXL2 1672 aa15.81■□□□□ 0.12
Sdc1-201ENSMUST00000020911 Crocc2F6XLV1 1638 aa15.81■□□□□ 0.12
Sdc1-201ENSMUST00000020911 Fyco1Q8VDC1 1437 aa15.81■□□□□ 0.12
Sdc1-201ENSMUST00000020911 Erich3F6QRE9 1637 aa15.8■□□□□ 0.12
Sdc1-201ENSMUST00000020911 Chic2Q9D9G3 165 aa15.8■□□□□ 0.12
Sdc1-201ENSMUST00000020911 Slc4a3P16283 1227 aa15.79■□□□□ 0.12
Sdc1-201ENSMUST00000020911 Urb2E9Q7L1 1524 aaKnown RBP15.77■□□□□ 0.11
Sdc1-201ENSMUST00000020911 Rpap1Q80TE0 1409 aa15.77■□□□□ 0.11
Sdc1-201ENSMUST00000020911 Plb1Q3TTY0 1478 aa15.76■□□□□ 0.11
Sdc1-201ENSMUST00000020911 Lmo7E9PYF4 1699 aaKnown RBP15.74■□□□□ 0.11
Sdc1-201ENSMUST00000020911 EprsQ8CGC7 1512 aaKnown RBP15.73■□□□□ 0.11
Sdc1-201ENSMUST00000020911 Ipo9Q91YE6 1041 aa15.73■□□□□ 0.11
Sdc1-201ENSMUST00000020911 Washc2Q6PGL7 1334 aa15.72■□□□□ 0.11
Sdc1-201ENSMUST00000020911 BccipQ9CWI3 316 aa15.71■□□□□ 0.11
Sdc1-201ENSMUST00000020911 Chrna2Q91X60 512 aa15.71■□□□□ 0.11
Sdc1-201ENSMUST00000020911 NclP09405 707 aaKnown RBP15.71■□□□□ 0.1
Sdc1-201ENSMUST00000020911 3425401B19RikD3Z1D3 1412 aa15.71■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Pla2r1Q62028 1487 aa15.7■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Scaf1Q5U4C3 1256 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 80.3 ms