RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 NischQ80TM9 1593 aa21.15■□□□□ 0.98
Sdc1-201ENSMUST00000020911 Gm35339A0A140LHH9 1649 aa20.51■□□□□ 0.87
Sdc1-201ENSMUST00000020911 Abcc9P70170 1546 aa20.41■□□□□ 0.86
Sdc1-201ENSMUST00000020911 Abcc8B2RUS7 1588 aa20.04■□□□□ 0.8
Sdc1-201ENSMUST00000020911 Rhox8Q6VSS7 320 aa20.01■□□□□ 0.79
Sdc1-201ENSMUST00000020911 Rpgrip1Q9EPQ2 1331 aa19.71■□□□□ 0.75
Sdc1-201ENSMUST00000020911 Pcgf6Q99NA9 353 aa19.3■□□□□ 0.68
Sdc1-201ENSMUST00000020911 Acin1Q9JIX8 1338 aaKnown RBP19.04■□□□□ 0.64
Sdc1-201ENSMUST00000020911 Ehmt2Q9Z148 1263 aaKnown RBP18.84■□□□□ 0.61
Sdc1-201ENSMUST00000020911 Rtl1Q7M732 1744 aa18.81■□□□□ 0.6
Sdc1-201ENSMUST00000020911 ScribQ80U72 1612 aa18.76■□□□□ 0.59
Sdc1-201ENSMUST00000020911 Neurod1Q60867 357 aa18.73■□□□□ 0.59
Sdc1-201ENSMUST00000020911 Supt5hO55201 1082 aaKnown RBP18.58■□□□□ 0.57
Sdc1-201ENSMUST00000020911 Ccdc180J3QNE4 1664 aa18.58■□□□□ 0.56
Sdc1-201ENSMUST00000020911 Ccdc136Q3TVA9 1136 aa18.58■□□□□ 0.56
Sdc1-201ENSMUST00000020911 DiexfQ8BTT6 772 aaKnown RBP18.55■□□□□ 0.56
Sdc1-201ENSMUST00000020911 Rb1cc1Q9ESK9 1588 aa18.54■□□□□ 0.56
Sdc1-201ENSMUST00000020911 Las1lA2BE28 776 aaKnown RBP18.51■□□□□ 0.55
Sdc1-201ENSMUST00000020911 Kdm5dQ62240 1548 aa18.46■□□□□ 0.55
Sdc1-201ENSMUST00000020911 Dcaf1Q80TR8 1506 aa18.46■□□□□ 0.55
Sdc1-201ENSMUST00000020911 1700123L14RikQ3V2K7 440 aa18.45■□□□□ 0.54
Sdc1-201ENSMUST00000020911 CenpbP27790 599 aa18.44■□□□□ 0.54
Sdc1-201ENSMUST00000020911 Zcchc6Q5BLK4 1491 aaKnown RBP18.33■□□□□ 0.52
Sdc1-201ENSMUST00000020911 NacadQ5SWP3 1504 aa18.27■□□□□ 0.52
Sdc1-201ENSMUST00000020911 Baz1aO88379 1555 aa18.24■□□□□ 0.51
Sdc1-201ENSMUST00000020911 Trim41Q5NCC3 630 aa18.23■□□□□ 0.51
Sdc1-201ENSMUST00000020911 Myt1Q8CFC2 1127 aa18.23■□□□□ 0.51
Sdc1-201ENSMUST00000020911 Csrnp3P59055 597 aa18.2■□□□□ 0.5
Sdc1-201ENSMUST00000020911 Bcl11aQ9QYE3 773 aa18.2■□□□□ 0.5
Sdc1-201ENSMUST00000020911 PrkcshO08795 521 aa17.93■□□□□ 0.46
Sdc1-201ENSMUST00000020911 Gm38655A0A286YDK6 273 aa17.87■□□□□ 0.45
Sdc1-201ENSMUST00000020911 Sycp2Q9CUU3 1500 aa17.87■□□□□ 0.45
Sdc1-201ENSMUST00000020911 HrcG5E8J6 738 aa17.85■□□□□ 0.45
Sdc1-201ENSMUST00000020911 Zeb1Q64318 1117 aa17.83■□□□□ 0.45
Sdc1-201ENSMUST00000020911 Anks4bQ8K3X6 423 aa17.83■□□□□ 0.44
Sdc1-201ENSMUST00000020911 Smarca2Q6DIC0 1577 aa17.78■□□□□ 0.44
Sdc1-201ENSMUST00000020911 Cngb1E1AZ71 1325 aa17.77■□□□□ 0.44
Sdc1-201ENSMUST00000020911 Crybg2B7ZCC2 1516 aa17.73■□□□□ 0.43
Sdc1-201ENSMUST00000020911 Aplp2Q06335 707 aa17.71■□□□□ 0.43
Sdc1-201ENSMUST00000020911 Ifnlr1Q8CGK5 535 aa17.64■□□□□ 0.41
Sdc1-201ENSMUST00000020911 Sall2Q9QX96 1004 aa17.63■□□□□ 0.41
Sdc1-201ENSMUST00000020911 Cecr2E9Q2Z1 1453 aa17.6■□□□□ 0.41
Sdc1-201ENSMUST00000020911 Amer1Q7TS75 1132 aa17.59■□□□□ 0.41
Sdc1-201ENSMUST00000020911 Esf1Q3V1V3 845 aaKnown RBP17.58■□□□□ 0.4
Sdc1-201ENSMUST00000020911 Gab3Q8BSM5 595 aa17.56■□□□□ 0.4
Sdc1-201ENSMUST00000020911 BicraF8VPZ9 1578 aa17.5■□□□□ 0.39
Sdc1-201ENSMUST00000020911 Brd4Q9ESU6 1400 aaKnown RBP17.49■□□□□ 0.39
Sdc1-201ENSMUST00000020911 Chic1Q8CBW7 227 aa17.47■□□□□ 0.39
Sdc1-201ENSMUST00000020911 Fam71e1A1L3C1 212 aa17.4■□□□□ 0.38
Sdc1-201ENSMUST00000020911 Cep164Q5DU05 1446 aa17.38■□□□□ 0.37
Sdc1-201ENSMUST00000020911 Synj1Q8CHC4 1574 aa17.35■□□□□ 0.37
Sdc1-201ENSMUST00000020911 Rsf1E9PWW9 1441 aaKnown RBP17.34■□□□□ 0.37
Sdc1-201ENSMUST00000020911 Cdk11bP24788 784 aaKnown RBP17.28■□□□□ 0.36
Sdc1-201ENSMUST00000020911 Golga3P55937 1487 aa17.26■□□□□ 0.35
Sdc1-201ENSMUST00000020911 Ccdc88bQ4QRL3 1481 aa17.26■□□□□ 0.35
Sdc1-201ENSMUST00000020911 Mapk8ip2Q9ERE9 830 aa17.25■□□□□ 0.35
Sdc1-201ENSMUST00000020911 CftrP26361 1476 aa17.24■□□□□ 0.35
Sdc1-201ENSMUST00000020911 Nop58Q6DFW4 536 aaKnown RBP17.21■□□□□ 0.35
Sdc1-201ENSMUST00000020911 Ppargc1bQ8VHJ7 1014 aa17.18■□□□□ 0.34
Sdc1-201ENSMUST00000020911 Wdr66E9Q743 1299 aa17.17■□□□□ 0.34
Sdc1-201ENSMUST00000020911 Smarca4Q3TKT4 1613 aaKnown RBP17.09■□□□□ 0.33
Sdc1-201ENSMUST00000020911 SafbD3YXK2 937 aaKnown RBP17.08■□□□□ 0.33
Sdc1-201ENSMUST00000020911 Cttnbp2B9EJA2 1648 aa17.06■□□□□ 0.32
Sdc1-201ENSMUST00000020911 NefmP08553 848 aa17.06■□□□□ 0.32
Sdc1-201ENSMUST00000020911 Aebp2Q9Z248 504 aaKnown RBP17.01■□□□□ 0.31
Sdc1-201ENSMUST00000020911 Myt1lP97500 1187 aa16.97■□□□□ 0.31
Sdc1-201ENSMUST00000020911 Mier1Q5UAK0 511 aa16.95■□□□□ 0.3
Sdc1-201ENSMUST00000020911 Hdac5Q9Z2V6 1113 aa16.95■□□□□ 0.3
Sdc1-201ENSMUST00000020911 Cc2d2aQ8CFW7 1633 aa16.94■□□□□ 0.3
Sdc1-201ENSMUST00000020911 Iqgap2Q3UQ44 1575 aa16.92■□□□□ 0.3
Sdc1-201ENSMUST00000020911 Top2bQ64511 1612 aa16.92■□□□□ 0.3
Sdc1-201ENSMUST00000020911 Npm2Q80W85 207 aa16.9■□□□□ 0.3
Sdc1-201ENSMUST00000020911 Hnrnpul2Q00PI9 745 aaKnown RBP16.87■□□□□ 0.29
Sdc1-201ENSMUST00000020911 Ttbk1Q6PCN3 1308 aa16.87■□□□□ 0.29
Sdc1-201ENSMUST00000020911 Il27Q8K3I6 234 aa16.86■□□□□ 0.29
Sdc1-201ENSMUST00000020911 Atad2bE9Q166 1460 aaKnown RBP16.84■□□□□ 0.29
Sdc1-201ENSMUST00000020911 Pds5bQ4VA53 1446 aaKnown RBP16.8■□□□□ 0.28
Sdc1-201ENSMUST00000020911 Fmn1Q05860 1466 aa16.79■□□□□ 0.28
Sdc1-201ENSMUST00000020911 Pknox2Q8BG99 474 aa16.79■□□□□ 0.28
Sdc1-201ENSMUST00000020911 ClspnQ80YR7 1315 aa16.76■□□□□ 0.27
Sdc1-201ENSMUST00000020911 UbtfP25976 765 aaKnown RBP16.75■□□□□ 0.27
Sdc1-201ENSMUST00000020911 Fgd1P52734 960 aa16.73■□□□□ 0.27
Sdc1-201ENSMUST00000020911 Top2aQ01320 1528 aaKnown RBP16.65■□□□□ 0.26
Sdc1-201ENSMUST00000020911 Rapgef2Q8CHG7 1496 aa16.64■□□□□ 0.25
Sdc1-201ENSMUST00000020911 Frmpd1A2AKB4 1549 aa16.63■□□□□ 0.25
Sdc1-201ENSMUST00000020911 Anp32aO35381 247 aa16.62■□□□□ 0.25
Sdc1-201ENSMUST00000020911 Plcd4Q8K3R3 807 aa16.62■□□□□ 0.25
Sdc1-201ENSMUST00000020911 Ap3b1Q9Z1T1 1105 aa16.61■□□□□ 0.25
Sdc1-201ENSMUST00000020911 Kif15Q6P9L6 1387 aa16.61■□□□□ 0.25
Sdc1-201ENSMUST00000020911 Cep162Q6ZQ06 1403 aa16.6■□□□□ 0.25
Sdc1-201ENSMUST00000020911 Ercc6F8VPZ5 1481 aa16.59■□□□□ 0.25
Sdc1-201ENSMUST00000020911 NrdcQ8BHG1 1161 aa16.56■□□□□ 0.24
Sdc1-201ENSMUST00000020911 Plekhg3Q4VAC9 1341 aa16.55■□□□□ 0.24
Sdc1-201ENSMUST00000020911 Wdr62Q3U3T8 1523 aa16.55■□□□□ 0.24
Sdc1-201ENSMUST00000020911 Rtl5Q5DTT4 599 aa16.54■□□□□ 0.24
Sdc1-201ENSMUST00000020911 Nolc1E9Q5C9 702 aaKnown RBP16.52■□□□□ 0.24
Sdc1-201ENSMUST00000020911 Gtf3c3Q3TMP1 882 aa16.52■□□□□ 0.24
Sdc1-201ENSMUST00000020911 Tnnt3Q9QZ47 272 aa16.52■□□□□ 0.23
Sdc1-201ENSMUST00000020911 Clip1Q922J3 1391 aa16.47■□□□□ 0.23
Sdc1-201ENSMUST00000020911 Pelp1Q9DBD5 1123 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 158.1 ms