RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Wdr43Q6ZQL4 677 aaKnown RBP7.26□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Iqcf3Q9D498 203 aa7.26□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Hsp90aa1P07901 733 aaKnown RBP7.26□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Polr3glQ8R0C0 218 aa7.25□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Eid3Q3V124 375 aa7.25□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Ppp4r2Q0VGB7 417 aa7.24□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Htatsf1Q8BGC0 757 aa7.24□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Pds5bQ4VA53 1446 aaKnown RBP7.24□□□□□ -1.25
Vps13d-201ENSMUST00000020441 NudcO35685 332 aaKnown RBP7.24□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Ifnlr1Q8CGK5 535 aa7.23□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Map7O88735 730 aa7.23□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Safb2Q80YR5 991 aaKnown RBP7.23□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Ppargc1bQ8VHJ7 1014 aa7.22□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Mrs2Q5NCE8 434 aa7.22□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Sall2Q9QX96 1004 aa7.22□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Mroh3A0A1D5RM54 893 aa7.22□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Pde3bQ61409 1100 aa7.22□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Fkbp15Q6P9Q6 1216 aaKnown RBP7.21□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Fgd1P52734 960 aa7.21□□□□□ -1.25
Vps13d-201ENSMUST00000020441 Ppm1gQ61074 542 aa7.21□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Adam1bQ8R534 806 aa7.2□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Stard8Q8K031 1019 aa7.2□□□□□ -1.26
Vps13d-201ENSMUST00000020441 PtmsQ9D0J8 101 aaKnown RBP7.2□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Chic2Q9D9G3 165 aa7.2□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Srpk2O54781 681 aaKnown RBP7.2□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Mtus2Q3UHD3 1353 aa7.19□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Trim44Q9QXA7 346 aa7.19□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Card11Q8CIS0 1159 aa7.18□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Gm20521D3Z5F7 333 aa7.18□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Exosc9Q9JHI7 438 aaKnown RBP7.18□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Fmn1Q05860 1466 aa7.17□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Eif4g2Q62448 906 aaKnown RBP7.16□□□□□ -1.26
Vps13d-201ENSMUST00000020441 KnstrnQ9D9Z1 312 aaKnown RBP7.16□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Kdm5dQ62240 1548 aa7.15□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Zbtb4Q5F293 982 aa7.15□□□□□ -1.26
Vps13d-201ENSMUST00000020441 Arhgap27A2AB59 869 aa7.15□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Dhx57Q6P5D3 1388 aaKnown RBP7.15□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Rgl3Q3UYI5 709 aa7.15□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Ofd1Q80Z25 1017 aa7.14□□□□□ -1.27
Vps13d-201ENSMUST00000020441 CntlnA2AM05 1397 aa7.14□□□□□ -1.27
Vps13d-201ENSMUST00000020441 HnrnpuQ8VEK3 800 aaKnown RBP7.14□□□□□ -1.27
Vps13d-201ENSMUST00000020441 AampJ3QN89 436 aa7.14□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Hsp90ab1P11499 724 aaKnown RBP7.13□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Mapk8ip3Q9ESN9 1337 aa7.13□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Ccdc27Q3V036 639 aa7.13□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Rad21Q61550 635 aaKnown RBP7.12□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Fyco1Q8VDC1 1437 aa7.12□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Tmf1B9EKI3 1091 aa7.12□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Rock2P70336 1388 aa7.12□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Fhad1A6PWD2 1420 aa7.11□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Rwdd1Q9CQK7 243 aa7.11□□□□□ -1.27
Vps13d-201ENSMUST00000020441 CatipB9EKE5 520 aa7.11□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Rrp7aQ9D1C9 280 aaKnown RBP7.11□□□□□ -1.27
Vps13d-201ENSMUST00000020441 MccE9PWI3 1003 aa7.1□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Csrnp3P59055 597 aa7.1□□□□□ -1.27
Vps13d-201ENSMUST00000020441 DekQ7TNV0 380 aaKnown RBP7.1□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Rpap1Q80TE0 1409 aa7.09□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Trim30dE9PWL0 497 aa7.09□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Prdm10Q3UTQ7 1184 aa7.09□□□□□ -1.27
Vps13d-201ENSMUST00000020441 Znf326O88291 580 aa7.09□□□□□ -1.27
Vps13d-201ENSMUST00000020441 CanxP35564 591 aaKnown RBP7.09□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Kdm2aP59997 1161 aa7.08□□□□□ -1.28
Vps13d-201ENSMUST00000020441 4933402E13RikQ9D4D2 429 aa7.08□□□□□ -1.28
Vps13d-201ENSMUST00000020441 P3h3Q8CG70 732 aa7.08□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Mapk8ip2Q9ERE9 830 aa7.08□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Ythdc1E9Q5K9 736 aaKnown RBP7.08□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Gm6268A2A3U9 297 aa7.08□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Gm973E9Q295 1059 aa7.07□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Aebp1Q640N1 1128 aa7.07□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Stag3O70576 1240 aa7.07□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Kif27Q7M6Z4 1394 aa7.07□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Cep162Q6ZQ06 1403 aa7.07□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Sycp2Q9CUU3 1500 aa7.07□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Dnai2A2AC93 623 aa7.07□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Rab11fip3Q8CHD8 1047 aa7.06□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Arhgap35Q91YM2 1499 aa7.06□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Gtf2e1Q9D0D5 440 aa7.06□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Grwd1Q810D6 446 aaKnown RBP7.05□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Tcerg1Q8CGF7 1100 aaKnown RBP7.05□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Wwc2Q6NXJ0 1187 aa7.05□□□□□ -1.28
Vps13d-201ENSMUST00000020441 PnnO35691 725 aaKnown RBP7.05□□□□□ -1.28
Vps13d-201ENSMUST00000020441 HdgfP51859 237 aaKnown RBP7.05□□□□□ -1.28
Vps13d-201ENSMUST00000020441 UacaQ8CGB3 1411 aa7.05□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Phldb1Q6PDH0 1371 aaKnown RBP7.05□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Map4P27546 1125 aaKnown RBP7.04□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Sart3Q9JLI8 962 aaKnown RBP7.04□□□□□ -1.28
Vps13d-201ENSMUST00000020441 PtmaP26350 111 aa7.04□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Lemd3Q9WU40 921 aa7.04□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Rtf1A2AQ19 715 aaKnown RBP7.03□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Ciz1Q8VEH2 845 aa7.03□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Glipr1l2Q9CQ35 332 aa7.03□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Zscan21Q07231 555 aa7.03□□□□□ -1.28
Vps13d-201ENSMUST00000020441 EspnQ9ET47 871 aa7.03□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Hoxa7P02830 229 aa7.03□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Casc1Q6TDU8 730 aa7.02□□□□□ -1.28
Vps13d-201ENSMUST00000020441 Mphosph9A6H5Y1 991 aa7.02□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Smarce1O54941 411 aaKnown RBP7.02□□□□□ -1.29
Vps13d-201ENSMUST00000020441 WrnO09053 1401 aa7.01□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Smarca2Q6DIC0 1577 aa7.01□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Baz1bQ9Z277 1479 aa7.01□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms