RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 NrdcQ8BHG1 1161 aa25.86■■□□□ 1.73
Ubp1-201ENSMUST00000009885 Eea1Q8BL66 1411 aa25.84■■□□□ 1.73
Ubp1-201ENSMUST00000009885 Sin3aQ60520 1274 aaKnown RBP25.79■■□□□ 1.72
Ubp1-201ENSMUST00000009885 Amer1Q7TS75 1132 aa25.77■■□□□ 1.72
Ubp1-201ENSMUST00000009885 Mrs2Q5NCE8 434 aa25.74■■□□□ 1.71
Ubp1-201ENSMUST00000009885 Top2bQ64511 1612 aa25.72■■□□□ 1.71
Ubp1-201ENSMUST00000009885 Rpap1Q80TE0 1409 aa25.71■■□□□ 1.71
Ubp1-201ENSMUST00000009885 Baz1bQ9Z277 1479 aa25.68■■□□□ 1.7
Ubp1-201ENSMUST00000009885 Gm13697A2AK42 830 aa25.66■■□□□ 1.7
Ubp1-201ENSMUST00000009885 Top2aQ01320 1528 aaKnown RBP25.65■■□□□ 1.7
Ubp1-201ENSMUST00000009885 Slc4a3P16283 1227 aa25.64■■□□□ 1.69
Ubp1-201ENSMUST00000009885 Cttnbp2B9EJA2 1648 aa25.57■■□□□ 1.68
Ubp1-201ENSMUST00000009885 Chic2Q9D9G3 165 aa25.57■■□□□ 1.68
Ubp1-201ENSMUST00000009885 4933416C03RikQ3V063 378 aa25.56■■□□□ 1.68
Ubp1-201ENSMUST00000009885 Ccer2J3QPU5 274 aa25.52■■□□□ 1.68
Ubp1-201ENSMUST00000009885 Wwc2Q6NXJ0 1187 aa25.51■■□□□ 1.67
Ubp1-201ENSMUST00000009885 Pak3Q61036 559 aa25.49■■□□□ 1.67
Ubp1-201ENSMUST00000009885 Arap1Q4LDD4 1452 aa25.49■■□□□ 1.67
Ubp1-201ENSMUST00000009885 Ccdc18Q640L5 1455 aa25.49■■□□□ 1.67
Ubp1-201ENSMUST00000009885 Smg6P61406 1418 aaKnown RBP25.43■■□□□ 1.66
Ubp1-201ENSMUST00000009885 Ccdc27Q3V036 639 aa25.41■■□□□ 1.66
Ubp1-201ENSMUST00000009885 DaxxO35613 739 aa25.4■■□□□ 1.66
Ubp1-201ENSMUST00000009885 Arhgap35Q91YM2 1499 aa25.36■■□□□ 1.65
Ubp1-201ENSMUST00000009885 Hdac5Q9Z2V6 1113 aa25.35■■□□□ 1.65
Ubp1-201ENSMUST00000009885 Upf2A2AT37 1269 aaKnown RBP25.31■■□□□ 1.64
Ubp1-201ENSMUST00000009885 Exoc6Q8R313 802 aa25.29■■□□□ 1.64
Ubp1-201ENSMUST00000009885 Washc2Q6PGL7 1334 aa25.28■■□□□ 1.64
Ubp1-201ENSMUST00000009885 PtprkP35822 1457 aa25.27■■□□□ 1.64
Ubp1-201ENSMUST00000009885 Ofd1Q80Z25 1017 aa25.26■■□□□ 1.63
Ubp1-201ENSMUST00000009885 Smarca4Q3TKT4 1613 aaKnown RBP25.26■■□□□ 1.63
Ubp1-201ENSMUST00000009885 NeflP08551 543 aa25.25■■□□□ 1.63
Ubp1-201ENSMUST00000009885 Hsp90aa1P07901 733 aaKnown RBP25.24■■□□□ 1.63
Ubp1-201ENSMUST00000009885 BicraF8VPZ9 1578 aa25.24■■□□□ 1.63
Ubp1-201ENSMUST00000009885 Arhgef5E9Q7D5 1581 aa25.24■■□□□ 1.63
Ubp1-201ENSMUST00000009885 Mia2Q91ZV0 1396 aa25.2■■□□□ 1.62
Ubp1-201ENSMUST00000009885 Kif15Q6P9L6 1387 aa25.19■■□□□ 1.62
Ubp1-201ENSMUST00000009885 Naip1Q9QWK5 1403 aa25.18■■□□□ 1.62
Ubp1-201ENSMUST00000009885 Zbtb4Q5F293 982 aa25.16■■□□□ 1.62
Ubp1-201ENSMUST00000009885 Slc4a2P13808 1237 aaKnown RBP25.15■■□□□ 1.62
Ubp1-201ENSMUST00000009885 UacaQ8CGB3 1411 aa25.14■■□□□ 1.61
Ubp1-201ENSMUST00000009885 Kdm5bQ80Y84 1544 aa25.11■■□□□ 1.61
Ubp1-201ENSMUST00000009885 Liat1Q810M6 228 aa25.11■■□□□ 1.61
Ubp1-201ENSMUST00000009885 Ipo9Q91YE6 1041 aa25.1■■□□□ 1.61
Ubp1-201ENSMUST00000009885 AqrQ8CFQ3 1481 aaKnown RBP25.1■■□□□ 1.61
Ubp1-201ENSMUST00000009885 Kcnh8P59111 1102 aa25.08■■□□□ 1.61
Ubp1-201ENSMUST00000009885 Irx3P81067 507 aa25.08■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Tcerg1Q8CGF7 1100 aaKnown RBP25.07■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Npm1Q61937 292 aaKnown RBP25.07■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Gtf3c3Q3TMP1 882 aa25.06■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Rad21Q61550 635 aaKnown RBP25.05■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Tiam1Q60610 1591 aa25.04■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Dhx29Q6PGC1 1365 aaKnown RBP25.04■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Anp32bQ9EST5 272 aaKnown RBP25.04■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Gm13695A2AK44 830 aa25.03■■□□□ 1.6
Ubp1-201ENSMUST00000009885 ChgaP26339 463 aaKnown RBP25.03■■□□□ 1.6
Ubp1-201ENSMUST00000009885 Ankrd36D3Z4K0 1415 aa25■■□□□ 1.59
Ubp1-201ENSMUST00000009885 Ccdc9Q8VC31 543 aaKnown RBP25■■□□□ 1.59
Ubp1-201ENSMUST00000009885 Fyco1Q8VDC1 1437 aa25■■□□□ 1.59
Ubp1-201ENSMUST00000009885 Fhad1A6PWD2 1420 aa24.98■■□□□ 1.59
Ubp1-201ENSMUST00000009885 Mphosph9A6H5Y1 991 aa24.97■■□□□ 1.59
Ubp1-201ENSMUST00000009885 Rgl3Q3UYI5 709 aa24.97■■□□□ 1.59
Ubp1-201ENSMUST00000009885 CntlnA2AM05 1397 aa24.97■■□□□ 1.59
Ubp1-201ENSMUST00000009885 Plcd4Q8K3R3 807 aa24.96■■□□□ 1.59
Ubp1-201ENSMUST00000009885 Aebp1Q640N1 1128 aa24.95■■□□□ 1.59
Ubp1-201ENSMUST00000009885 TchhA0A0B4J1F9 1599 aa24.95■■□□□ 1.58
Ubp1-201ENSMUST00000009885 Egfem1Q8C088 590 aa24.93■■□□□ 1.58
Ubp1-201ENSMUST00000009885 CanxP35564 591 aaKnown RBP24.92■■□□□ 1.58
Ubp1-201ENSMUST00000009885 Arhgap27A2AB59 869 aa24.91■■□□□ 1.58
Ubp1-201ENSMUST00000009885 Pkd2O35245 966 aa24.91■■□□□ 1.58
Ubp1-201ENSMUST00000009885 NrkQ9R0G8 1455 aa24.9■■□□□ 1.58
Ubp1-201ENSMUST00000009885 Iqgap2Q3UQ44 1575 aa24.9■■□□□ 1.58
Ubp1-201ENSMUST00000009885 Eif4g1Q6NZJ6 1600 aaKnown RBP24.89■■□□□ 1.58
Ubp1-201ENSMUST00000009885 Zbtb7cQ8VCZ7 619 aa24.89■■□□□ 1.58
Ubp1-201ENSMUST00000009885 Shroom4Q1W617 1475 aa24.89■■□□□ 1.57
Ubp1-201ENSMUST00000009885 ArxO35085 564 aa24.87■■□□□ 1.57
Ubp1-201ENSMUST00000009885 B4galnt3Q6L8S8 986 aa24.86■■□□□ 1.57
Ubp1-201ENSMUST00000009885 3425401B19RikD3Z1D3 1412 aa24.86■■□□□ 1.57
Ubp1-201ENSMUST00000009885 Vps8Q0P5W1 1427 aa24.85■■□□□ 1.57
Ubp1-201ENSMUST00000009885 Grwd1Q810D6 446 aaKnown RBP24.83■■□□□ 1.56
Ubp1-201ENSMUST00000009885 Dbr1Q923B1 550 aa24.81■■□□□ 1.56
Ubp1-201ENSMUST00000009885 PnisrA2AJT4 805 aaKnown RBP24.79■■□□□ 1.56
Ubp1-201ENSMUST00000009885 Slx4Q6P1D7 1565 aa24.79■■□□□ 1.56
Ubp1-201ENSMUST00000009885 Cabp1Q9JLK7 227 aa24.78■■□□□ 1.56
Ubp1-201ENSMUST00000009885 L3mbtl2P59178 703 aa24.77■■□□□ 1.56
Ubp1-201ENSMUST00000009885 Usp47Q8BY87 1376 aa24.76■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Naip5Q9R016 1403 aa24.76■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Ccnb3Q810T2 1396 aa24.75■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Card11Q8CIS0 1159 aa24.74■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Pcf11G3X9Z4 1553 aa24.74■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Map3k1P53349 1493 aa24.73■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Rundc1Q0VDN7 615 aa24.73■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Iqcf3Q9D498 203 aa24.72■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Zfp644E9QA22 1323 aa24.72■■□□□ 1.55
Ubp1-201ENSMUST00000009885 Mroh2bQ7M6Y6 1581 aa24.7■■□□□ 1.54
Ubp1-201ENSMUST00000009885 Cwc22Q8C5N3 908 aaKnown RBP24.69■■□□□ 1.54
Ubp1-201ENSMUST00000009885 Carmil1Q6EDY6 1374 aa24.68■■□□□ 1.54
Ubp1-201ENSMUST00000009885 Naip2Q9QUK4 1447 aa24.67■■□□□ 1.54
Ubp1-201ENSMUST00000009885 Apbb1Q9QXJ1 710 aa24.67■■□□□ 1.54
Ubp1-201ENSMUST00000009885 Ncoa2Q61026 1462 aa24.66■■□□□ 1.54
Ubp1-201ENSMUST00000009885 Efcab5A0JP43 1406 aa24.65■■□□□ 1.54
Retrieved 100 of 22,080 RNA–protein pairs in 7 ms