RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	UTP21	Q06078	939 aa	Predicted RBP	4.22	□□□□□ -1.73
DSL1	YNL258C	YCG1	Q06680	1035 aa		4.22	□□□□□ -1.73
DSL1	YNL258C	ENT1	Q12518	454 aa		4.22	□□□□□ -1.73
DSL1	YNL258C	RPB2	P08518	1224 aa	Known RBP	4.21	□□□□□ -1.73
DSL1	YNL258C	GAR1	P28007	205 aa	Known RBP	4.21	□□□□□ -1.73
DSL1	YNL258C	RAD16	P31244	790 aa		4.21	□□□□□ -1.73
DSL1	YNL258C	RPP1	P38786	293 aa		4.21	□□□□□ -1.73
DSL1	YNL258C	PPE1	P38796	400 aa		4.21	□□□□□ -1.73
DSL1	YNL258C	PSD1	P39006	500 aa		4.21	□□□□□ -1.73
DSL1	YNL258C	YNR061C	P53747	219 aa		4.21	□□□□□ -1.73
DSL1	YNL258C	SPN1	Q06505	410 aa	Predicted RBP	4.21	□□□□□ -1.73
DSL1	YNL258C	VAM6	Q07468	1049 aa		4.21	□□□□□ -1.73
DSL1	YNL258C	CIR2	Q08822	631 aa		4.21	□□□□□ -1.73
DSL1	YNL258C	POM34	Q12445	299 aa		4.21	□□□□□ -1.73
DSL1	YNL258C	YDR132C	Q03900	495 aa		4.21	□□□□□ -1.74
DSL1	YNL258C	VBA4	Q04602	768 aa	Known RBP	4.21	□□□□□ -1.74
DSL1	YNL258C	NPC2	Q12408	173 aa		4.21	□□□□□ -1.74
DSL1	YNL258C	SGF29	P25554	259 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	ERG3	P32353	365 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	ECM32	P32644	1121 aa	Known RBP	4.2	□□□□□ -1.74
DSL1	YNL258C	UBS1	P38290	277 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	ETP1	P38748	585 aa	Known RBP	4.2	□□□□□ -1.74
DSL1	YNL258C	FSH1	P38777	243 aa	Known RBP	4.2	□□□□□ -1.74
DSL1	YNL258C	GTF1	P53260	183 aa	Predicted RBP	4.2	□□□□□ -1.74
DSL1	YNL258C	YGR130C	P53278	816 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	CSL4	P53859	292 aa	Predicted RBP	4.2	□□□□□ -1.74
DSL1	YNL258C	TIM50	Q02776	476 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	YPL034W	Q03083	165 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	PKH1	Q03407	766 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	ROT1	Q03691	256 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	TRP3	P00937	484 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	ERG20	P08524	352 aa	Known RBP	4.2	□□□□□ -1.74
DSL1	YNL258C	PEX1	P24004	1043 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	EMC1	P25574	760 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	LYS14	P40971	790 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	YBP2	P53169	641 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	MTL1	P53214	551 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	TAM41	P53230	385 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	MRPL19	P53875	158 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	YMR187C	Q03236	431 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	PPN1	Q04119	674 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	HOS1	Q12214	470 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	SWM1	Q12379	170 aa		4.2	□□□□□ -1.74
DSL1	YNL258C	MRP20	P32387	263 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	RPT3	P33298	428 aa	Known RBP	4.19	□□□□□ -1.74
DSL1	YNL258C	CCT3	P39077	534 aa	Known RBP	4.19	□□□□□ -1.74
DSL1	YNL258C	SAP4	P53036	818 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	COS12	P53053	380 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	SPO1	P53541	631 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	GRC3	Q07845	632 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	NOP12	Q08208	459 aa	Known RBP	4.19	□□□□□ -1.74
DSL1	YNL258C	SAC6	P32599	642 aa	Known RBP	4.19	□□□□□ -1.74
DSL1	YNL258C	TOA1	P32773	286 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	BLI1	P35727	113 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	STB5	P38699	743 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	MEF2	P39677	819 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	BUD16	P39988	312 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	CCT8	P47079	568 aa	Known RBP	4.19	□□□□□ -1.74
DSL1	YNL258C	YSA1	Q01976	231 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	FDC1	Q03034	503 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	YAP6	Q03935	383 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	PEX19	Q07418	342 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	SGO1	Q08490	590 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	TRM11	Q12463	433 aa		4.19	□□□□□ -1.74
DSL1	YNL258C	CYC7	P00045	113 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	SUI3	P09064	285 aa	Known RBP	4.18	□□□□□ -1.74
DSL1	YNL258C	KAR3	P17119	729 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
DSL1	YNL258C	KAR4	P25583	335 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	PRE2	P30656	287 aa	Known RBP	4.18	□□□□□ -1.74
DSL1	YNL258C	YKR073C	P36153	106 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	SFB3	P38810	929 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	LRO1	P40345	661 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	BUL1	P48524	976 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	SQS1	P53866	767 aa	Known RBP	4.18	□□□□□ -1.74
DSL1	YNL258C	NSG2	P53898	299 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	YLR287C	Q05881	355 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	YFT2	Q06676	274 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	TAH18	Q12181	623 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	GLT1	Q12680	2145 aa	Known RBP	4.18	□□□□□ -1.74
DSL1	YNL258C	PCK1	P10963	549 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	PRP22	P24384	1145 aa	Known RBP	4.18	□□□□□ -1.74
DSL1	YNL258C	KIN82	P25341	720 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	RPC53	P25441	422 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	YCR015C	P25616	317 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	DCG1	P32460	244 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	KAE1	P36132	386 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	TAT1	P38085	619 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	FMO1	P38866	432 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	CAB2	P40506	365 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	MFB1	Q04922	465 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	GPB1	Q08886	897 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	COX17	Q12287	69 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	HSH49	Q99181	213 aa	Predicted RBP	4.18	□□□□□ -1.74
DSL1	YNL258C	VCX1	Q99385	411 aa		4.18	□□□□□ -1.74
DSL1	YNL258C	ILS1	P09436	1072 aa	Known RBP	4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-LR1	P0C2J4	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-F	P0CX61	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-GR2	P0CX62	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-C	P25383	438 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms