RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeastyeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA2YDR295C TMA10Q06177 86 aa3.83□□□□□ -1.8
HDA2YDR295C VPS36Q06696 566 aa3.83□□□□□ -1.8
HDA2YDR295C PLP2Q12017 286 aa3.83□□□□□ -1.8
HDA2YDR295C YOL114CQ12322 202 aa3.83□□□□□ -1.8
HDA2YDR295C MF(ALPHA)2P32435 120 aa3.82□□□□□ -1.8
HDA2YDR295C IME2P32581 645 aa3.82□□□□□ -1.8
HDA2YDR295C ORC2P32833 620 aa3.82□□□□□ -1.8
HDA2YDR295C NPR3P38742 1146 aa3.82□□□□□ -1.8
HDA2YDR295C EMP65P40085 556 aa3.82□□□□□ -1.8
HDA2YDR295C TEX1P53851 422 aaKnown RBP3.82□□□□□ -1.8
HDA2YDR295C CNM67P53865 581 aaKnown RBP3.82□□□□□ -1.8
HDA2YDR295C TIM10P87108 93 aa3.82□□□□□ -1.8
HDA2YDR295C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
HDA2YDR295C YMR210WQ03649 449 aa3.82□□□□□ -1.8
HDA2YDR295C RNH1Q04740 348 aa3.82□□□□□ -1.8
HDA2YDR295C UTP21Q06078 939 aaPredicted RBP3.82□□□□□ -1.8
HDA2YDR295C YLH47Q06493 454 aa3.82□□□□□ -1.8
HDA2YDR295C NGL1Q08213 363 aaKnown RBP3.82□□□□□ -1.8
HDA2YDR295C RRP36Q12481 300 aaPredicted RBP3.82□□□□□ -1.8
HDA2YDR295C PGA3Q12746 312 aaKnown RBP3.82□□□□□ -1.8
HDA2YDR295C TUF1P02992 437 aaKnown RBP3.82□□□□□ -1.8
HDA2YDR295C PDX1P16451 410 aa3.82□□□□□ -1.8
HDA2YDR295C REC107P21651 314 aa3.82□□□□□ -1.8
HDA2YDR295C APN1P22936 367 aa3.82□□□□□ -1.8
HDA2YDR295C TOD6P34219 525 aa3.82□□□□□ -1.8
HDA2YDR295C LSM5P40089 93 aaKnown RBP3.82□□□□□ -1.8
HDA2YDR295C RAD26P40352 1085 aa3.82□□□□□ -1.8
HDA2YDR295C RIC1P40395 1056 aa3.82□□□□□ -1.8
HDA2YDR295C IRC5P43610 853 aa3.82□□□□□ -1.8
HDA2YDR295C BUL1P48524 976 aa3.82□□□□□ -1.8
HDA2YDR295C YBP2P53169 641 aa3.82□□□□□ -1.8
HDA2YDR295C RIM8P53179 542 aa3.82□□□□□ -1.8
HDA2YDR295C NCS2P53923 493 aaPredicted RBP3.82□□□□□ -1.8
HDA2YDR295C MOT3P54785 490 aaKnown RBP3.82□□□□□ -1.8
HDA2YDR295C HOT1Q03213 719 aa3.82□□□□□ -1.8
HDA2YDR295C SMF3Q12078 473 aaPredicted RBP3.82□□□□□ -1.8
HDA2YDR295C TRM11Q12463 433 aa3.82□□□□□ -1.8
HDA2YDR295C HRP1Q99383 534 aaKnown RBP3.82□□□□□ -1.8
HDA2YDR295C VMA2P16140 517 aaKnown RBP3.81□□□□□ -1.8
HDA2YDR295C PRP6P19735 899 aaPredicted RBP3.81□□□□□ -1.8
HDA2YDR295C THI80P35202 319 aa3.81□□□□□ -1.8
HDA2YDR295C SHM2P37291 469 aaKnown RBP3.81□□□□□ -1.8
HDA2YDR295C YBR259WP38338 688 aa3.81□□□□□ -1.8
HDA2YDR295C LYS9P38999 446 aa3.81□□□□□ -1.8
HDA2YDR295C GET2P40056 285 aa3.81□□□□□ -1.8
HDA2YDR295C KAP123P40069 1113 aaKnown RBP3.81□□□□□ -1.8
HDA2YDR295C DPH1P40487 425 aaKnown RBP3.81□□□□□ -1.8
HDA2YDR295C MCM21Q06675 368 aa3.81□□□□□ -1.8
HDA2YDR295C CWC2Q12046 339 aaPredicted RBP3.81□□□□□ -1.8
HDA2YDR295C SES1P07284 462 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C FRS1P15624 595 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C PRE10P21242 288 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
HDA2YDR295C RNR1P21524 888 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C CAD1P24813 409 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C RNQ1P25367 405 aa3.8□□□□□ -1.8
HDA2YDR295C BYE1P36106 594 aa3.8□□□□□ -1.8
HDA2YDR295C ECM1P39715 212 aa3.8□□□□□ -1.8
HDA2YDR295C BUD8P41698 603 aa3.8□□□□□ -1.8
HDA2YDR295C RMD8P43620 662 aa3.8□□□□□ -1.8
HDA2YDR295C OCA1P50946 238 aaPredicted RBP3.8□□□□□ -1.8
HDA2YDR295C NRG1Q03125 231 aa3.8□□□□□ -1.8
HDA2YDR295C PRP42Q03776 544 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C RAD33Q04231 177 aa3.8□□□□□ -1.8
HDA2YDR295C YPR172WQ06608 200 aa3.8□□□□□ -1.8
HDA2YDR295C HIM1Q06674 414 aa3.8□□□□□ -1.8
HDA2YDR295C VHS3Q08438 674 aa3.8□□□□□ -1.8
HDA2YDR295C REX3Q12090 404 aa3.8□□□□□ -1.8
HDA2YDR295C TRM13Q12383 476 aa3.8□□□□□ -1.8
HDA2YDR295C ECM3Q99252 613 aa3.8□□□□□ -1.8
HDA2YDR295C SEM1O94742 89 aa3.8□□□□□ -1.8
HDA2YDR295C MSH1P25846 959 aa3.8□□□□□ -1.8
HDA2YDR295C CBF2P32504 956 aa3.8□□□□□ -1.8
HDA2YDR295C CNS1P33313 385 aa3.8□□□□□ -1.8
HDA2YDR295C MTH1P35198 433 aa3.8□□□□□ -1.8
HDA2YDR295C IMA5P40884 581 aa3.8□□□□□ -1.8
HDA2YDR295C FKH2P41813 862 aa3.8□□□□□ -1.8
HDA2YDR295C NOP9P47077 666 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C ARC35P53731 342 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C MTD1Q02046 320 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C TIM50Q02776 476 aa3.8□□□□□ -1.8
HDA2YDR295C CUE5Q08412 411 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C RVB2Q12464 471 aaKnown RBP3.8□□□□□ -1.8
HDA2YDR295C SAC3P46674 1301 aa3.79□□□□□ -1.8
HDA2YDR295C STF1P01098 86 aa3.79□□□□□ -1.8
HDA2YDR295C ACO1P19414 778 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
HDA2YDR295C TRX1P22217 103 aaKnown RBP3.79□□□□□ -1.8
HDA2YDR295C NGG1P32494 702 aa3.79□□□□□ -1.8
HDA2YDR295C PET127P32606 800 aa3.79□□□□□ -1.8
HDA2YDR295C MTC7P32633 139 aa3.79□□□□□ -1.8
HDA2YDR295C DUN1P39009 513 aa3.79□□□□□ -1.8
HDA2YDR295C YEL068CP39977 110 aa3.79□□□□□ -1.8
HDA2YDR295C PCL7P40186 285 aa3.79□□□□□ -1.8
HDA2YDR295C SEC9P40357 651 aa3.79□□□□□ -1.8
HDA2YDR295C GCD10P41814 478 aa3.79□□□□□ -1.8
HDA2YDR295C MDE1P47095 244 aa3.79□□□□□ -1.8
HDA2YDR295C MTL1P53214 551 aa3.79□□□□□ -1.8
HDA2YDR295C ALF1P53904 254 aa3.79□□□□□ -1.8
HDA2YDR295C TEP1P53916 434 aa3.79□□□□□ -1.8
HDA2YDR295C ZDS2P54786 942 aa3.79□□□□□ -1.8
HDA2YDR295C SSL2Q00578 843 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms