RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR50	snR50	SIM1	P40472	476 aa		0.46	□□□□□ -2.34
snR50	snR50	RLP7	P40693	322 aa	Known RBP	0.46	□□□□□ -2.34
snR50	snR50	SAE2	P46946	345 aa		0.46	□□□□□ -2.34
snR50	snR50	BNA2	P47125	453 aa		0.46	□□□□□ -2.34
snR50	snR50	FAA4	P47912	694 aa	Known RBP	0.46	□□□□□ -2.34
snR50	snR50	RFX1	P48743	811 aa		0.46	□□□□□ -2.34
snR50	snR50	SPO1	P53541	631 aa		0.46	□□□□□ -2.34
snR50	snR50	ATP25	Q03153	612 aa		0.46	□□□□□ -2.34
snR50	snR50	GFD1	Q04839	188 aa	Known RBP	0.46	□□□□□ -2.34
snR50	snR50	TPO3	Q06451	622 aa		0.46	□□□□□ -2.34
snR50	snR50	YFT2	Q06676	274 aa		0.46	□□□□□ -2.34
snR50	snR50	RLF2	Q12495	606 aa		0.46	□□□□□ -2.34
snR50	snR50	CBS2	P14905	389 aa		0.45	□□□□□ -2.34
snR50	snR50	CNE1	P27825	502 aa		0.45	□□□□□ -2.34
snR50	snR50	HXT1	P32465	570 aa		0.45	□□□□□ -2.34
snR50	snR50	YPT7	P32939	208 aa		0.45	□□□□□ -2.34
snR50	snR50	RPT3	P33298	428 aa	Known RBP	0.45	□□□□□ -2.34
snR50	snR50	LOT5	P34234	306 aa		0.45	□□□□□ -2.34
snR50	snR50	SLD2	P34252	453 aa		0.45	□□□□□ -2.34
snR50	snR50	AKL1	P38080	1108 aa	Known RBP	0.45	□□□□□ -2.34
snR50	snR50	YND1	P40009	630 aa		0.45	□□□□□ -2.34
snR50	snR50	YIL092W	P40497	633 aa		0.45	□□□□□ -2.34
snR50	snR50	SHR5	P41912	237 aa		0.45	□□□□□ -2.34
snR50	snR50	POL32	P47110	350 aa		0.45	□□□□□ -2.34
snR50	snR50	UTP8	P53276	713 aa	Known RBP	0.45	□□□□□ -2.34
snR50	snR50	YNL058C	P53947	316 aa		0.45	□□□□□ -2.34
snR50	snR50	CRZ1	P53968	678 aa		0.45	□□□□□ -2.34
snR50	snR50	BET4	Q00618	327 aa		0.45	□□□□□ -2.34
snR50	snR50	CEF1	Q03654	590 aa	Predicted RBP	0.45	□□□□□ -2.34
snR50	snR50	SND1	Q04007	877 aa		0.45	□□□□□ -2.34
snR50	snR50	YDR514C	Q04408	483 aa		0.45	□□□□□ -2.34
snR50	snR50	YMR034C	Q05131	434 aa	Predicted RBP	0.45	□□□□□ -2.34
snR50	snR50	YLR352W	Q06479	807 aa		0.45	□□□□□ -2.34
snR50	snR50	RRP15	Q06511	250 aa	Predicted RBP	0.45	□□□□□ -2.34
snR50	snR50	GPN2	Q08726	347 aa	Predicted RBP	0.45	□□□□□ -2.34
snR50	snR50	FAL1	Q12099	399 aa	Known RBP	0.45	□□□□□ -2.34
snR50	snR50	YPR071W	Q12346	211 aa		0.45	□□□□□ -2.34
snR50	snR50	YBR298C-A	Q8TGK4	73 aa		0.45	□□□□□ -2.34
snR50	snR50	YER175W-A	Q8TGU4	54 aa		0.45	□□□□□ -2.34
snR50	snR50	RPL42A	P0CX27	106 aa	Known RBP	0.44	□□□□□ -2.34
snR50	snR50	RPL42B	P0CX28	106 aa	Known RBP	0.44	□□□□□ -2.34
snR50	snR50	MSD1	P15179	658 aa	Known RBP	0.44	□□□□□ -2.34
snR50	snR50	ATE1	P16639	503 aa		0.44	□□□□□ -2.34
snR50	snR50	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	0.44	□□□□□ -2.34	not detected
snR50	snR50	GSH1	P32477	678 aa		0.44	□□□□□ -2.34
snR50	snR50	ELF1	P36053	145 aa		0.44	□□□□□ -2.34
snR50	snR50	AVT5	P38176	459 aa		0.44	□□□□□ -2.34
snR50	snR50	YIL077C	P40508	320 aa		0.44	□□□□□ -2.34
snR50	snR50	YFL015C	P43578	164 aa		0.44	□□□□□ -2.34
snR50	snR50	TY4A-J	P47023	414 aa		0.44	□□□□□ -2.34
snR50	snR50	YGL242C	P53066	181 aa		0.44	□□□□□ -2.34
snR50	snR50	IGO1	P53897	168 aa		0.44	□□□□□ -2.34
snR50	snR50	SEN54	Q02825	467 aa	Predicted RBP	0.44	□□□□□ -2.34
snR50	snR50	YPL071C	Q02864	156 aa		0.44	□□□□□ -2.34
snR50	snR50	GDE1	Q02979	1223 aa		0.44	□□□□□ -2.34
snR50	snR50	YDR338C	Q05497	695 aa		0.44	□□□□□ -2.34
snR50	snR50	HRD3	Q05787	833 aa		0.44	□□□□□ -2.34
snR50	snR50	OPI10	Q08202	246 aa		0.44	□□□□□ -2.34
snR50	snR50	POM34	Q12445	299 aa		0.44	□□□□□ -2.34
snR50	snR50	ECM3	Q99252	613 aa		0.44	□□□□□ -2.34
snR50	snR50	CYB2	P00175	591 aa		0.43	□□□□□ -2.34
snR50	snR50	BI2	P03873	423 aa		0.43	□□□□□ -2.34
snR50	snR50	YML002W	P0CF17	737 aa		0.43	□□□□□ -2.34
snR50	snR50	YJU2	P28320	278 aa	Predicted RBP	0.43	□□□□□ -2.34
snR50	snR50	BRN1	P38170	754 aa		0.43	□□□□□ -2.34
snR50	snR50	COS111	P38308	924 aa		0.43	□□□□□ -2.34
snR50	snR50	BZZ1	P38822	633 aa		0.43	□□□□□ -2.34
snR50	snR50	PCL6	P40038	420 aa		0.43	□□□□□ -2.34
snR50	snR50	GYP8	P43570	497 aa		0.43	□□□□□ -2.34
snR50	snR50	UBP6	P43593	499 aa	Known RBP	0.43	□□□□□ -2.34
snR50	snR50	PFD1	P46988	109 aa		0.43	□□□□□ -2.34
snR50	snR50	YIP4	P53093	235 aa		0.43	□□□□□ -2.34
snR50	snR50	CUL3	P53202	744 aa		0.43	□□□□□ -2.34
snR50	snR50	TRS23	Q03784	219 aa		0.43	□□□□□ -2.34
snR50	snR50	TGS1	Q12052	315 aa		0.43	□□□□□ -2.34
snR50	snR50	GET3	Q12154	354 aa	Known RBP	0.43	□□□□□ -2.34
snR50	snR50	TAH18	Q12181	623 aa		0.43	□□□□□ -2.34
snR50	snR50	HBN1	Q96VH4	193 aa		0.43	□□□□□ -2.34
snR50	snR50	RNR3	P21672	869 aa	Known RBP	0.42	□□□□□ -2.34
snR50	snR50	MAK32	P23060	363 aa		0.42	□□□□□ -2.34
snR50	snR50	KIN82	P25341	720 aa		0.42	□□□□□ -2.34
snR50	snR50	PER1	P25625	357 aa		0.42	□□□□□ -2.34
snR50	snR50	YBR284W	P38150	797 aa		0.42	□□□□□ -2.34
snR50	snR50	SRO77	P38163	1010 aa		0.42	□□□□□ -2.34
snR50	snR50	MTC6	P38849	526 aa		0.42	□□□□□ -2.34
snR50	snR50	YJR061W	P40355	935 aa		0.42	□□□□□ -2.34
snR50	snR50	YJL070C	P40361	888 aa		0.42	□□□□□ -2.34
snR50	snR50	SPG5	P42933	373 aa		0.42	□□□□□ -2.34
snR50	snR50	YPI1	P43587	155 aa		0.42	□□□□□ -2.34
snR50	snR50	SET2	P46995	733 aa	Known RBP	0.42	□□□□□ -2.34
snR50	snR50	COX18	P53239	316 aa		0.42	□□□□□ -2.34
snR50	snR50	BOR1	P53838	576 aa		0.42	□□□□□ -2.34
snR50	snR50	RPS15	Q01855	142 aa	Known RBP	0.42	□□□□□ -2.34
snR50	snR50	OYE2	Q03558	400 aa	Known RBP	0.42	□□□□□ -2.34
snR50	snR50	ECM16	Q04217	1267 aa	Known RBP	0.42	□□□□□ -2.34
snR50	snR50	FMP42	Q04991	504 aa		0.42	□□□□□ -2.34
snR50	snR50	SPO75	Q07798	868 aa		0.42	□□□□□ -2.34
snR50	snR50	MET7	Q08645	548 aa		0.42	□□□□□ -2.34
snR50	snR50	YPL216W	Q08964	1102 aa		0.42	□□□□□ -2.34
snR50	snR50	SEC3	P33332	1336 aa	Known RBP	0.41	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 79.4 ms