RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W TKL2P33315 681 aa6.79□□□□□ -1.32
CTF19YPL018W YBL036CP38197 257 aa6.79□□□□□ -1.32
CTF19YPL018W REI1P38344 393 aaPredicted RBP6.79□□□□□ -1.32
CTF19YPL018W MMF1P40185 145 aaKnown RBP6.79□□□□□ -1.32
CTF19YPL018W ASG7P46993 209 aa6.79□□□□□ -1.32
CTF19YPL018W TY4A-JP47023 414 aa6.79□□□□□ -1.32
CTF19YPL018W BRO1P48582 844 aa6.79□□□□□ -1.32
CTF19YPL018W TUB4P53378 473 aa6.79□□□□□ -1.32
CTF19YPL018W DIG1Q03063 452 aaKnown RBP6.79□□□□□ -1.32
CTF19YPL018W NGL3Q03210 505 aa6.79□□□□□ -1.32
CTF19YPL018W ATG16Q03818 150 aa6.79□□□□□ -1.32
CTF19YPL018W MDM38Q08179 573 aa6.79□□□□□ -1.32
CTF19YPL018W VPS54Q12071 889 aa6.79□□□□□ -1.32
CTF19YPL018W HRT3Q12347 344 aa6.79□□□□□ -1.32
CTF19YPL018W BI3Q9ZZW7 517 aa6.79□□□□□ -1.32
CTF19YPL018W YLR462WO13556 202 aa6.78□□□□□ -1.32
CTF19YPL018W PRT1P06103 763 aaKnown RBP6.78□□□□□ -1.32
CTF19YPL018W ABD1P32783 436 aaPredicted RBP6.78□□□□□ -1.32
CTF19YPL018W RPS0AP32905 252 aaKnown RBP6.78□□□□□ -1.32
CTF19YPL018W SEG2P34250 1132 aa6.78□□□□□ -1.32
CTF19YPL018W YHL049CP38722 271 aa6.78□□□□□ -1.32
CTF19YPL018W SMF1P38925 575 aa6.78□□□□□ -1.32
CTF19YPL018W TMN3P40071 706 aa6.78□□□□□ -1.32
CTF19YPL018W YER189WP40104 122 aa6.78□□□□□ -1.32
CTF19YPL018W YIR016WP40572 265 aa6.78□□□□□ -1.32
CTF19YPL018W YFL064CP43540 174 aa6.78□□□□□ -1.32
CTF19YPL018W SNZ3P43545 298 aa6.78□□□□□ -1.32
CTF19YPL018W VTC4P47075 721 aa6.78□□□□□ -1.32
CTF19YPL018W PUS2P53167 370 aa6.78□□□□□ -1.32
CTF19YPL018W SNZ2P53824 298 aa6.78□□□□□ -1.32
CTF19YPL018W YNL011CP53980 444 aa6.78□□□□□ -1.32
CTF19YPL018W ADA2Q02336 434 aa6.78□□□□□ -1.32
CTF19YPL018W ERV41Q04651 352 aa6.78□□□□□ -1.32
CTF19YPL018W TAF9Q05027 157 aa6.78□□□□□ -1.32
CTF19YPL018W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
CTF19YPL018W LEA1Q08963 238 aaPredicted RBP6.78□□□□□ -1.32
CTF19YPL018W MNL2Q12205 849 aa6.78□□□□□ -1.32
CTF19YPL018W ZRT2Q12436 422 aa6.78□□□□□ -1.32
CTF19YPL018W YBL111CQ3E7Y5 667 aa6.78□□□□□ -1.32
CTF19YPL018W TAO3P40468 2376 aa6.77□□□□□ -1.32
CTF19YPL018W AEP2P22136 580 aa6.77□□□□□ -1.33
CTF19YPL018W RAD27P26793 382 aa6.77□□□□□ -1.33
CTF19YPL018W DPB3P27344 201 aa6.77□□□□□ -1.33
CTF19YPL018W PAP1P29468 568 aaKnown RBP6.77□□□□□ -1.33
CTF19YPL018W SEC1P30619 724 aaKnown RBP6.77□□□□□ -1.33
CTF19YPL018W MRP4P32902 394 aa6.77□□□□□ -1.33
CTF19YPL018W SRB2P34162 210 aa6.77□□□□□ -1.33
CTF19YPL018W YBR056WP38081 501 aa6.77□□□□□ -1.33
CTF19YPL018W YBR284WP38150 797 aa6.77□□□□□ -1.33
CTF19YPL018W APM2P38700 605 aa6.77□□□□□ -1.33
CTF19YPL018W ASG1P40467 964 aa6.77□□□□□ -1.33
CTF19YPL018W SAP185P40856 1058 aa6.77□□□□□ -1.33
CTF19YPL018W TAF1P46677 1066 aa6.77□□□□□ -1.33
CTF19YPL018W INP52P50942 1183 aa6.77□□□□□ -1.33
CTF19YPL018W SXM1Q04175 944 aaKnown RBP6.77□□□□□ -1.33
CTF19YPL018W IVY1Q04934 453 aa6.77□□□□□ -1.33
CTF19YPL018W YLR257WQ06146 321 aaKnown RBP6.77□□□□□ -1.33
CTF19YPL018W DIS3Q08162 1001 aaKnown RBP6.77□□□□□ -1.33
CTF19YPL018W AIM39Q08223 395 aa6.77□□□□□ -1.33
CTF19YPL018W DDC1Q08949 612 aa6.77□□□□□ -1.33
CTF19YPL018W MOT1P32333 1867 aa6.77□□□□□ -1.33
CTF19YPL018W ADE3P07245 946 aaKnown RBP6.76□□□□□ -1.33
CTF19YPL018W PET111P08468 800 aa6.76□□□□□ -1.33
CTF19YPL018W PUT4P15380 627 aa6.76□□□□□ -1.33
CTF19YPL018W TRX1P22217 103 aaKnown RBP6.76□□□□□ -1.33
CTF19YPL018W PGS1P25578 521 aa6.76□□□□□ -1.33
CTF19YPL018W URK1P27515 501 aa6.76□□□□□ -1.33
CTF19YPL018W YBL055CP34220 418 aaPredicted RBP6.76□□□□□ -1.33
CTF19YPL018W BYE1P36106 594 aa6.76□□□□□ -1.33
CTF19YPL018W ABZ1P37254 787 aaPredicted RBP6.76□□□□□ -1.33
CTF19YPL018W RCK2P38623 610 aa6.76□□□□□ -1.33
CTF19YPL018W RAD55P38953 406 aa6.76□□□□□ -1.33
CTF19YPL018W PAC1P39946 494 aaKnown RBP6.76□□□□□ -1.33
CTF19YPL018W LCP5P40079 357 aaPredicted RBP6.76□□□□□ -1.33
CTF19YPL018W CDC1P40986 491 aa6.76□□□□□ -1.33
CTF19YPL018W RPC17P47076 161 aa6.76□□□□□ -1.33
CTF19YPL018W VPS25P47142 202 aa6.76□□□□□ -1.33
CTF19YPL018W NOG2P53742 486 aaKnown RBP6.76□□□□□ -1.33
CTF19YPL018W MTD1Q02046 320 aaKnown RBP6.76□□□□□ -1.33
CTF19YPL018W ELP3Q02908 557 aaKnown RBP6.76□□□□□ -1.33
CTF19YPL018W HOS3Q02959 697 aaKnown RBP6.76□□□□□ -1.33
CTF19YPL018W YDR278CQ05612 105 aa6.76□□□□□ -1.33
CTF19YPL018W RCL1Q08096 367 aaPredicted RBP6.76□□□□□ -1.33
CTF19YPL018W THI20Q08224 551 aa6.76□□□□□ -1.33
CTF19YPL018W APC5Q08683 685 aa6.76□□□□□ -1.33
CTF19YPL018W NBP2Q12163 236 aa6.76□□□□□ -1.33
CTF19YPL018W SPO21Q12411 609 aa6.76□□□□□ -1.33
CTF19YPL018W VPS5Q92331 675 aa6.76□□□□□ -1.33
CTF19YPL018W APM4Q99186 491 aa6.76□□□□□ -1.33
CTF19YPL018W RIF1P29539 1916 aa6.76□□□□□ -1.33
CTF19YPL018W EST1P17214 699 aaPredicted RBP6.75□□□□□ -1.33
CTF19YPL018W PDE1P22434 369 aa6.75□□□□□ -1.33
CTF19YPL018W YEL043WP32618 956 aa6.75□□□□□ -1.33
CTF19YPL018W HSL7P38274 827 aa6.75□□□□□ -1.33
CTF19YPL018W PMC1P38929 1173 aaPredicted RBP6.75□□□□□ -1.33
CTF19YPL018W AVT2P39981 480 aa6.75□□□□□ -1.33
CTF19YPL018W KHA1P40309 873 aa6.75□□□□□ -1.33
CTF19YPL018W YIL054WP40524 105 aa6.75□□□□□ -1.33
CTF19YPL018W CEP3P40969 608 aa6.75□□□□□ -1.33
CTF19YPL018W MAF1P41910 395 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms