RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHS3	YOR054C	ABZ2	Q03266	374 aa		4.23	□□□□□ -1.73
VHS3	YOR054C	BUD22	Q04347	519 aa	Known RBP	4.23	□□□□□ -1.73
VHS3	YOR054C	DYN3	Q04949	312 aa		4.23	□□□□□ -1.73
VHS3	YOR054C	GLO2	Q05584	274 aa		4.23	□□□□□ -1.73
VHS3	YOR054C	RGC1	Q06108	1083 aa	Known RBP	4.23	□□□□□ -1.73
VHS3	YOR054C	PMT7	Q06644	662 aa		4.23	□□□□□ -1.73
VHS3	YOR054C	YOL075C	Q08234	1294 aa		4.23	□□□□□ -1.73
VHS3	YOR054C	APM4	Q99186	491 aa		4.23	□□□□□ -1.73
VHS3	YOR054C	VCX1	Q99385	411 aa		4.23	□□□□□ -1.73
VHS3	YOR054C	FIG2	P25653	1609 aa		4.23	□□□□□ -1.73
VHS3	YOR054C	ERG11	P10614	530 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	GPA2	P10823	449 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	PHO84	P25297	587 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	PEP12	P32854	288 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	TFC4	P33339	1025 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	DYS1	P38791	387 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	APE4	P38821	490 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	SMC2	P38989	1170 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	OAF1	P39720	1047 aa	Predicted RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	BOL3	P39724	118 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	DPH1	P40487	425 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	YFL034W	P43564	1073 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	MNN11	P46985	422 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	TY4A-J	P47023	414 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	MDE1	P47095	244 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	IMD3	P50095	523 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	RTC4	P53850	401 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	YNL058C	P53947	316 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	YDR239C	Q03780	787 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	ECM11	Q04110	302 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	SMP3	Q04174	516 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	NSE3	Q05541	303 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	TOS4	Q06266	489 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	MDM36	Q06820	579 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	ADY3	Q07732	790 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	YAP7	Q08182	245 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	PEX15	Q08215	383 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	ALE1	Q08548	619 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	GET3	Q12154	354 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	NTO1	Q12311	748 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	RPL6B	P05739	176 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	PEX1	P24004	1043 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	YKL063C	P35725	167 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	LSM12	P38828	187 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	SWD1	P39706	426 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	FTR1	P40088	404 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	ESL1	P40456	1118 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	PAC11	P40960	533 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	DIM1	P41819	318 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	IRC6	P43615	237 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	MDV1	P47025	714 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	BNA3	P47039	444 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	APS3	P47064	194 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	KEL2	P50090	882 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	PSP1	P50896	841 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	TAF6	P53040	516 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	RMR1	P53060	241 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	YGL108C	P53139	140 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	YBP2	P53169	641 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	UBX4	P54730	416 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	ZDS2	P54786	942 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	NOG1	Q02892	647 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	ATG20	Q07528	640 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	YLR031W	Q07978	186 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	MSC6	Q08818	692 aa	Known RBP	4.22	□□□□□ -1.73
VHS3	YOR054C	PTC5	Q12511	572 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	SRF1	Q12516	437 aa		4.22	□□□□□ -1.73
VHS3	YOR054C	HKR1	P41809	1802 aa		4.21	□□□□□ -1.73
VHS3	YOR054C	RED1	P14291	827 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	CMP2	P14747	604 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	TRM1	P15565	570 aa	Known RBP	4.21	□□□□□ -1.74
VHS3	YOR054C	MCM3	P24279	971 aa	Known RBP	4.21	□□□□□ -1.74
VHS3	YOR054C	PRR1	P28708	518 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	ATP3	P38077	311 aa	Known RBP	4.21	□□□□□ -1.74
VHS3	YOR054C	ECM2	P38241	364 aa	Known RBP	4.21	□□□□□ -1.74
VHS3	YOR054C	DIA4	P38705	446 aa	Predicted RBP	4.21	□□□□□ -1.74
VHS3	YOR054C	YHL008C	P38750	627 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	AKR1	P39010	764 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	YTA12	P40341	825 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	SER33	P40510	469 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	SRB7	P47822	140 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	ISM1	P48526	1002 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	ZIP2	P53061	704 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	ASI2	P53895	289 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	MEH1	Q02205	184 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	MTC5	Q03897	1148 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	RAD30	Q04049	632 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	SPO75	Q07798	868 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	VHS3	Q08438	674 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	APC5	Q08683	685 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	AIM41	Q12032	185 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	YDL109C	Q12103	647 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	BAG7	Q12128	409 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	YRR1	Q12172	810 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	ARP6	Q12509	438 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	YLR278C	Q05854	1341 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	THS1	P04801	734 aa	Known RBP	4.21	□□□□□ -1.74
VHS3	YOR054C	OPI1	P21957	404 aa		4.21	□□□□□ -1.74
VHS3	YOR054C	RPA135	P22138	1203 aa	Known RBP	4.21	□□□□□ -1.74
VHS3	YOR054C	RPC53	P25441	422 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 141.3 ms