RNA–Protein interactions for RNA: YFR051C

RET2, Transcript of Delta subunit of the coatomer complex (COPI), yeast

Gene RET2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET2	YFR051C	BLI1	P35727	113 aa		10.57	□□□□□ -0.72
RET2	YFR051C	HIS2	P38635	335 aa		10.57	□□□□□ -0.72
RET2	YFR051C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	10.56	□□□□□ -0.72	not detected
RET2	YFR051C	SEC23	P15303	768 aa	Known RBP	10.56	□□□□□ -0.72
RET2	YFR051C	EST1	P17214	699 aa	Predicted RBP	10.56	□□□□□ -0.72
RET2	YFR051C	DBF4	P32325	704 aa		10.56	□□□□□ -0.72
RET2	YFR051C	ABD1	P32783	436 aa	Predicted RBP	10.56	□□□□□ -0.72
RET2	YFR051C	SPC72	P39723	622 aa		10.56	□□□□□ -0.72
RET2	YFR051C	ELP3	Q02908	557 aa	Known RBP	10.56	□□□□□ -0.72
RET2	YFR051C	SIL1	Q08199	421 aa		10.56	□□□□□ -0.72
RET2	YFR051C	LPX1	Q12405	387 aa	Known RBP	10.56	□□□□□ -0.72
RET2	YFR051C	CCP1	P00431	361 aa		10.55	□□□□□ -0.72
RET2	YFR051C	PSE1	P32337	1089 aa	Known RBP	10.55	□□□□□ -0.72
RET2	YFR051C	ECM13	P38195	257 aa		10.55	□□□□□ -0.72
RET2	YFR051C	LYS9	P38999	446 aa		10.55	□□□□□ -0.72
RET2	YFR051C	SEC9	P40357	651 aa		10.55	□□□□□ -0.72
RET2	YFR051C	YIL161W	P40449	235 aa	Known RBP	10.55	□□□□□ -0.72
RET2	YFR051C	UFE1	P41834	346 aa		10.55	□□□□□ -0.72
RET2	YFR051C	YHM2	Q04013	314 aa		10.55	□□□□□ -0.72
RET2	YFR051C	PMT7	Q06644	662 aa		10.55	□□□□□ -0.72
RET2	YFR051C	IRC10	Q08118	586 aa		10.55	□□□□□ -0.72
RET2	YFR051C	ERG11	P10614	530 aa		10.55	□□□□□ -0.72
RET2	YFR051C	POL12	P38121	705 aa	Predicted RBP	10.55	□□□□□ -0.72
RET2	YFR051C	YIL054W	P40524	105 aa		10.55	□□□□□ -0.72
RET2	YFR051C	YGR283C	P53336	341 aa	Predicted RBP	10.55	□□□□□ -0.72
RET2	YFR051C	YNL144C	P53907	740 aa		10.55	□□□□□ -0.72
RET2	YFR051C	RKM2	Q03942	479 aa		10.55	□□□□□ -0.72
RET2	YFR051C	TMN2	Q04562	672 aa		10.55	□□□□□ -0.72
RET2	YFR051C	SVS1	Q12254	260 aa		10.55	□□□□□ -0.72
RET2	YFR051C	PDH1	Q12428	516 aa	Known RBP	10.55	□□□□□ -0.72
RET2	YFR051C	YIH1	P25637	258 aa		10.54	□□□□□ -0.72
RET2	YFR051C	HXT1	P32465	570 aa		10.54	□□□□□ -0.72
RET2	YFR051C	STO1	P34160	861 aa	Known RBP	10.54	□□□□□ -0.72
RET2	YFR051C	MCX1	P38323	520 aa	Predicted RBP	10.54	□□□□□ -0.72
RET2	YFR051C	TCD1	P38756	429 aa		10.54	□□□□□ -0.72
RET2	YFR051C	MED6	P38782	295 aa		10.54	□□□□□ -0.72
RET2	YFR051C	EFM4	P40516	257 aa		10.54	□□□□□ -0.72
RET2	YFR051C	TUB4	P53378	473 aa		10.54	□□□□□ -0.72
RET2	YFR051C	SFB2	P53953	876 aa		10.54	□□□□□ -0.72
RET2	YFR051C	ATG16	Q03818	150 aa		10.54	□□□□□ -0.72
RET2	YFR051C	IVY1	Q04934	453 aa		10.54	□□□□□ -0.72
RET2	YFR051C	AAD4	Q07747	329 aa		10.54	□□□□□ -0.72
RET2	YFR051C	ADE3	P07245	946 aa	Known RBP	10.53	□□□□□ -0.72
RET2	YFR051C	TRX1	P22217	103 aa	Known RBP	10.53	□□□□□ -0.72
RET2	YFR051C	ATG12	P38316	186 aa		10.53	□□□□□ -0.72
RET2	YFR051C	SWC5	P38326	303 aa		10.53	□□□□□ -0.72
RET2	YFR051C	RRT2	P38332	387 aa		10.53	□□□□□ -0.72
RET2	YFR051C	NMD3	P38861	518 aa	Known RBP	10.53	□□□□□ -0.72
RET2	YFR051C	TMA108	P40462	946 aa		10.53	□□□□□ -0.72
RET2	YFR051C	ASG1	P40467	964 aa		10.53	□□□□□ -0.72
RET2	YFR051C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	10.53	□□□□□ -0.72	not detected
RET2	YFR051C	KAP114	P53067	1004 aa		10.53	□□□□□ -0.72
RET2	YFR051C	COQ6	P53318	479 aa		10.53	□□□□□ -0.72
RET2	YFR051C	COP1	P53622	1201 aa	Known RBP	10.53	□□□□□ -0.72
RET2	YFR051C	KTR6	P54070	446 aa		10.53	□□□□□ -0.72
RET2	YFR051C	PIR3	Q03180	325 aa		10.53	□□□□□ -0.72
RET2	YFR051C	AIM32	Q04689	311 aa		10.53	□□□□□ -0.72
RET2	YFR051C	THI21	Q08975	551 aa		10.53	□□□□□ -0.72
RET2	YFR051C	LCB4	Q12246	624 aa		10.53	□□□□□ -0.72
RET2	YFR051C	ENO2	P00925	437 aa	Known RBP	10.52	□□□□□ -0.73
RET2	YFR051C	GFA1	P14742	717 aa	Known RBP	10.52	□□□□□ -0.73
RET2	YFR051C	CAJ1	P39101	391 aa		10.52	□□□□□ -0.73
RET2	YFR051C	KHA1	P40309	873 aa		10.52	□□□□□ -0.73
RET2	YFR051C	BRO1	P48582	844 aa		10.52	□□□□□ -0.73
RET2	YFR051C	NOG2	P53742	486 aa	Known RBP	10.52	□□□□□ -0.73
RET2	YFR051C	TOF2	Q02208	771 aa		10.52	□□□□□ -0.73
RET2	YFR051C	DIG1	Q03063	452 aa	Known RBP	10.52	□□□□□ -0.73
RET2	YFR051C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	10.52	□□□□□ -0.73	not detected
RET2	YFR051C	CIR2	Q08822	631 aa		10.52	□□□□□ -0.73
RET2	YFR051C	HIS5	P07172	385 aa		10.51	□□□□□ -0.73
RET2	YFR051C	CAP1	P28495	268 aa	Known RBP	10.51	□□□□□ -0.73
RET2	YFR051C	SRB4	P32569	687 aa		10.51	□□□□□ -0.73
RET2	YFR051C	YJR079W	P47126	109 aa		10.51	□□□□□ -0.73
RET2	YFR051C	PEX31	P53203	462 aa		10.51	□□□□□ -0.73
RET2	YFR051C	BIO5	P53744	561 aa	Known RBP	10.51	□□□□□ -0.73
RET2	YFR051C	BET4	Q00618	327 aa		10.51	□□□□□ -0.73
RET2	YFR051C	INA17	Q02888	182 aa		10.51	□□□□□ -0.73
RET2	YFR051C	SEG1	Q04279	960 aa		10.51	□□□□□ -0.73
RET2	YFR051C	YOR387C	Q08910	206 aa		10.51	□□□□□ -0.73
RET2	YFR051C	RPS14A	P06367	137 aa	Known RBP	10.51	□□□□□ -0.73
RET2	YFR051C	YPK1	P12688	680 aa	Known RBP	10.51	□□□□□ -0.73
RET2	YFR051C	SGE1	P33335	543 aa		10.51	□□□□□ -0.73
RET2	YFR051C	KTR4	P38131	464 aa		10.51	□□□□□ -0.73
RET2	YFR051C	URA8	P38627	578 aa	Predicted RBP	10.51	□□□□□ -0.73
RET2	YFR051C	RPS14B	P39516	138 aa	Known RBP	10.51	□□□□□ -0.73
RET2	YFR051C	CHS6	P40955	746 aa		10.51	□□□□□ -0.73
RET2	YFR051C	GYP8	P43570	497 aa		10.51	□□□□□ -0.73
RET2	YFR051C	APT1	P49435	187 aa	Known RBP	10.51	□□□□□ -0.73
RET2	YFR051C	CDC55	Q00362	526 aa		10.51	□□□□□ -0.73
RET2	YFR051C	YDR278C	Q05612	105 aa		10.51	□□□□□ -0.73
RET2	YFR051C	PMC1	P38929	1173 aa	Predicted RBP	10.5	□□□□□ -0.73
RET2	YFR051C	CNN1	P43618	361 aa		10.5	□□□□□ -0.73
RET2	YFR051C	RTT101	P47050	842 aa		10.5	□□□□□ -0.73
RET2	YFR051C	YNL247W	P53852	767 aa	Known RBP	10.5	□□□□□ -0.73
RET2	YFR051C	YNL108C	P53929	270 aa		10.5	□□□□□ -0.73
RET2	YFR051C	YNL040W	P53960	456 aa	Predicted RBP	10.5	□□□□□ -0.73
RET2	YFR051C	SND1	Q04007	877 aa		10.5	□□□□□ -0.73
RET2	YFR051C	UFO1	Q04511	668 aa		10.5	□□□□□ -0.73
RET2	YFR051C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	10.5	□□□□□ -0.73	not detected
RET2	YFR051C	FUS1	P11710	512 aa		10.49	□□□□□ -0.73

Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms