RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	UBC6	P33296	250 aa	Predicted RBP	4.96	□□□□□ -1.61
SUP35	YDR172W	MOT2	P34909	587 aa	Known RBP	4.96	□□□□□ -1.61
SUP35	YDR172W	ECM2	P38241	364 aa	Known RBP	4.96	□□□□□ -1.61
SUP35	YDR172W	NPP2	P39997	493 aa		4.96	□□□□□ -1.61
SUP35	YDR172W	PHO86	P46956	311 aa		4.96	□□□□□ -1.61
SUP35	YDR172W	DRN1	P53255	507 aa	Known RBP	4.96	□□□□□ -1.61
SUP35	YDR172W	YGR111W	P53265	400 aa		4.96	□□□□□ -1.61
SUP35	YDR172W	USA1	Q03714	838 aa		4.96	□□□□□ -1.61
SUP35	YDR172W	YLR225C	Q05948	407 aa	Known RBP	4.96	□□□□□ -1.61
SUP35	YDR172W	MOT1	P32333	1867 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	KAR3	P17119	729 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
SUP35	YDR172W	VMA4	P22203	233 aa	Known RBP	4.96	□□□□□ -1.62
SUP35	YDR172W	SEC21	P32074	935 aa	Known RBP	4.96	□□□□□ -1.62
SUP35	YDR172W	DBF4	P32325	704 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	PEX2	P32800	271 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	YBL055C	P34220	418 aa	Predicted RBP	4.96	□□□□□ -1.62
SUP35	YDR172W	VID24	P38263	362 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	END3	P39013	349 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	ZAP1	P47043	880 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	UTP6	Q02354	440 aa	Known RBP	4.96	□□□□□ -1.62
SUP35	YDR172W	EEB1	Q02891	456 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	TRS130	Q03660	1102 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	RIO1	Q12196	484 aa	Known RBP	4.96	□□□□□ -1.62
SUP35	YDR172W	TIF6	Q12522	245 aa	Known RBP	4.96	□□□□□ -1.62
SUP35	YDR172W	RIF1	P29539	1916 aa		4.96	□□□□□ -1.62
SUP35	YDR172W	BI2	P03873	423 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	BI4	P03879	638 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	MAS2	P11914	482 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	POX1	P13711	748 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	CBF1	P17106	351 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	TIM23	P32897	222 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	OAF3	P36023	863 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	FLR1	P38124	548 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	TIF5	P38431	405 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	CBR1	P38626	284 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	MXR1	P40029	184 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	SMX2	P40204	77 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	SBE2	P42223	864 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	CUL3	P53202	744 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	RNT1	Q02555	471 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	MTG1	Q03151	367 aa	Predicted RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	HEH2	Q03281	663 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	SHS1	Q07657	551 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	YOR059C	Q08448	450 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	ABP140	Q08641	628 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	ZPS1	Q12512	249 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	ECM3	Q99252	613 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	FRT1	Q99332	602 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	BI3	Q9ZZW7	517 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	AI5_BETA	Q9ZZX0	354 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	RPL4A	P10664	362 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	KIN82	P25341	720 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	EFT1	P32324	842 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	SMY2	P32909	740 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	MSG5	P38590	489 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	MMS21	P38632	267 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	SPC72	P39723	622 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	FTR1	P40088	404 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	NTA1	P40354	457 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	PRK1	P40494	810 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	MKT1	P40850	830 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	SAP185	P40856	1058 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	YJR039W	P47107	1121 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	URB2	P47108	1174 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	RPL4B	P49626	362 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	CPR6	P53691	371 aa	Known RBP	4.95	□□□□□ -1.62
SUP35	YDR172W	ATG16	Q03818	150 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	UFO1	Q04511	668 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	PIG1	Q06216	648 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	HIF1	Q12373	385 aa		4.95	□□□□□ -1.62
SUP35	YDR172W	GPM1	P00950	247 aa	Known RBP	4.94	□□□□□ -1.62
SUP35	YDR172W	PLC1	P32383	869 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	GPT2	P36148	743 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	VHC1	P38329	1120 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	SAK1	P38990	1142 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	RIP-Chip
SUP35	YDR172W	TRS85	P46944	698 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	SHE10	P53075	577 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	MNP1	P53163	194 aa	Predicted RBP	4.94	□□□□□ -1.62
SUP35	YDR172W	NOG2	P53742	486 aa	Known RBP	4.94	□□□□□ -1.62
SUP35	YDR172W	YML020W	Q03722	664 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	EMG1	Q06287	252 aa	Known RBP	4.94	□□□□□ -1.62
SUP35	YDR172W	HFI1	Q12060	488 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	MNL2	Q12205	849 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	GIS3	Q12418	502 aa		4.94	□□□□□ -1.62
SUP35	YDR172W	RAD10	P06838	210 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	POL3	P15436	1097 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	IDI1	P15496	288 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	TMT1	P32643	299 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	FIR1	P40020	876 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	TMN3	P40071	706 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	YIL165C	P40446	119 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	INA22	P40576	216 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	RSM26	P47141	266 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	NUT2	Q06213	157 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
SUP35	YDR172W	SEY1	Q99287	776 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	ASP3-2	P0CX77	362 aa		4.93	□□□□□ -1.62
SUP35	YDR172W	ASP3-3	P0CX78	362 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms