RNA–Protein interactions for RNA: YDR029W

YDR029W, Transcript of Dubious open reading frame, yeast

Gene YDR029W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR029W	YDR029W	PIH1	P38768	344 aa		4.64	□□□□□ -1.67
YDR029W	YDR029W	PPE1	P38796	400 aa		4.64	□□□□□ -1.67
YDR029W	YDR029W	BUD8	P41698	603 aa		4.64	□□□□□ -1.67
YDR029W	YDR029W	PXA1	P41909	870 aa		4.64	□□□□□ -1.67
YDR029W	YDR029W	BFA1	P47113	574 aa		4.64	□□□□□ -1.67
YDR029W	YDR029W	ATP23	P53722	227 aa		4.64	□□□□□ -1.67
YDR029W	YDR029W	YLR001C	Q07895	862 aa		4.64	□□□□□ -1.67
YDR029W	YDR029W	PMA2	P19657	947 aa		4.63	□□□□□ -1.67
YDR029W	YDR029W	BEM3	P32873	1128 aa		4.63	□□□□□ -1.67
YDR029W	YDR029W	STB2	P46679	850 aa		4.63	□□□□□ -1.67
YDR029W	YDR029W	YIP4	P53093	235 aa		4.63	□□□□□ -1.67
YDR029W	YDR029W	YPL068C	Q02749	293 aa		4.62	□□□□□ -1.67
YDR029W	YDR029W	MFM1	Q02783	413 aa		4.62	□□□□□ -1.67
YDR029W	YDR029W	HEM1	P09950	548 aa	Predicted RBP	4.61	□□□□□ -1.67
YDR029W	YDR029W	MRPL9	P31334	269 aa		4.61	□□□□□ -1.67
YDR029W	YDR029W	ATG36	P46983	293 aa		4.61	□□□□□ -1.67
YDR029W	YDR029W	POB3	Q04636	552 aa	Known RBP	4.61	□□□□□ -1.67
YDR029W	YDR029W	IRC3	Q06683	689 aa		4.61	□□□□□ -1.67
YDR029W	YDR029W	CPA2	P03965	1118 aa	Known RBP	4.6	□□□□□ -1.67
YDR029W	YDR029W	RPL7A	P05737	244 aa	Known RBP	4.6	□□□□□ -1.67
YDR029W	YDR029W	AQY1	P0CD91	305 aa		4.6	□□□□□ -1.67
YDR029W	YDR029W	TUP1	P16649	713 aa		4.6	□□□□□ -1.67
YDR029W	YDR029W	ECM32	P32644	1121 aa	Known RBP	4.6	□□□□□ -1.67
YDR029W	YDR029W	MEP2	P41948	499 aa		4.6	□□□□□ -1.67
YDR029W	YDR029W	TIM50	Q02776	476 aa		4.6	□□□□□ -1.67
YDR029W	YDR029W	STP4	Q07351	490 aa		4.6	□□□□□ -1.67
YDR029W	YDR029W	RPL7B	Q12213	244 aa	Known RBP	4.6	□□□□□ -1.67
YDR029W	YDR029W	PRS5	Q12265	496 aa	Known RBP	4.6	□□□□□ -1.67
YDR029W	YDR029W	CNE1	P27825	502 aa		4.59	□□□□□ -1.67
YDR029W	YDR029W	MRPL7	P36519	292 aa		4.59	□□□□□ -1.67
YDR029W	YDR029W	NMD5	P46970	1048 aa		4.59	□□□□□ -1.67
YDR029W	YDR029W	SPO1	P53541	631 aa		4.59	□□□□□ -1.67
YDR029W	YDR029W	YNL193W	P53870	558 aa		4.59	□□□□□ -1.67
YDR029W	YDR029W	TFB2	Q02939	513 aa		4.59	□□□□□ -1.67
YDR029W	YDR029W	EFR3	Q03653	782 aa	Known RBP	4.59	□□□□□ -1.67
YDR029W	YDR029W	CRG1	P38892	291 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
YDR029W	YDR029W	YJL043W	P47053	257 aa		4.58	□□□□□ -1.68
YDR029W	YDR029W	YGR054W	P53235	642 aa	Known RBP	4.58	□□□□□ -1.68
YDR029W	YDR029W	COQ6	P53318	479 aa		4.58	□□□□□ -1.68
YDR029W	YDR029W	YNL018C	P53976	612 aa		4.58	□□□□□ -1.68
YDR029W	YDR029W	FDC1	Q03034	503 aa		4.58	□□□□□ -1.68
YDR029W	YDR029W	PRE4	P30657	266 aa		4.57	□□□□□ -1.68
YDR029W	YDR029W	RPC34	P32910	317 aa		4.57	□□□□□ -1.68
YDR029W	YDR029W	TDA3	P38758	523 aa		4.57	□□□□□ -1.68
YDR029W	YDR029W	FTR1	P40088	404 aa		4.57	□□□□□ -1.68
YDR029W	YDR029W	BUD17	P53727	317 aa		4.57	□□□□□ -1.68
YDR029W	YDR029W	ERG13	P54839	491 aa	Known RBP	4.57	□□□□□ -1.68
YDR029W	YDR029W	CEF1	Q03654	590 aa	Predicted RBP	4.57	□□□□□ -1.68
YDR029W	YDR029W	PPN1	Q04119	674 aa		4.57	□□□□□ -1.68
YDR029W	YDR029W	YDL073W	Q07454	984 aa		4.57	□□□□□ -1.68
YDR029W	YDR029W	YPL216W	Q08964	1102 aa		4.57	□□□□□ -1.68
YDR029W	YDR029W	SEC3	P33332	1336 aa	Known RBP	4.56	□□□□□ -1.68
YDR029W	YDR029W	RPS17A	P02407	136 aa	Known RBP	4.56	□□□□□ -1.68
YDR029W	YDR029W	SWI6	P09959	803 aa		4.56	□□□□□ -1.68
YDR029W	YDR029W	RPS17B	P14127	136 aa	Known RBP	4.56	□□□□□ -1.68
YDR029W	YDR029W	NOP15	P53927	220 aa	Predicted RBP	4.56	□□□□□ -1.68
YDR029W	YDR029W	WHI2	P12611	486 aa		4.55	□□□□□ -1.68
YDR029W	YDR029W	CDS1	P38221	457 aa		4.55	□□□□□ -1.68
YDR029W	YDR029W	DUN1	P39009	513 aa		4.55	□□□□□ -1.68
YDR029W	YDR029W	EXO1	P39875	702 aa		4.55	□□□□□ -1.68
YDR029W	YDR029W	IRC8	P47046	822 aa		4.55	□□□□□ -1.68
YDR029W	YDR029W	RSC9	Q03124	581 aa		4.55	□□□□□ -1.68
YDR029W	YDR029W	EUG1	P32474	517 aa		4.54	□□□□□ -1.68
YDR029W	YDR029W	MGS1	P40151	587 aa		4.54	□□□□□ -1.68
YDR029W	YDR029W	SNO3	P43544	222 aa		4.54	□□□□□ -1.68
YDR029W	YDR029W	OSW7	P43611	510 aa		4.54	□□□□□ -1.68
YDR029W	YDR029W	RET2	P43621	546 aa		4.54	□□□□□ -1.68
YDR029W	YDR029W	TAF4	P50105	388 aa		4.54	□□□□□ -1.68
YDR029W	YDR029W	ORC1	P54784	914 aa	Predicted RBP	4.54	□□□□□ -1.68
YDR029W	YDR029W	APD1	P38281	316 aa		4.53	□□□□□ -1.68
YDR029W	YDR029W	BST1	P43571	1029 aa		4.53	□□□□□ -1.68
YDR029W	YDR029W	YFL015C	P43578	164 aa		4.53	□□□□□ -1.68
YDR029W	YDR029W	YMR084W	A2P2R3	262 aa		4.52	□□□□□ -1.69
YDR029W	YDR029W	URE2	P23202	354 aa	Known RBP	4.52	□□□□□ -1.69
YDR029W	YDR029W	SDA1	P53313	767 aa	Known RBP	4.52	□□□□□ -1.69
YDR029W	YDR029W	SCW4	P53334	386 aa	Known RBP	4.52	□□□□□ -1.69
YDR029W	YDR029W	RPS21B	Q3E754	87 aa	Known RBP	4.52	□□□□□ -1.69
YDR029W	YDR029W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
YDR029W	YDR029W	YEL025C	P39991	1188 aa		4.51	□□□□□ -1.69
YDR029W	YDR029W	RPS15	Q01855	142 aa	Known RBP	4.51	□□□□□ -1.69
YDR029W	YDR029W	HLR1	Q04429	423 aa		4.51	□□□□□ -1.69
YDR029W	YDR029W	GLN4	P13188	809 aa	Known RBP	4.5	□□□□□ -1.69
YDR029W	YDR029W	RNR3	P21672	869 aa	Known RBP	4.5	□□□□□ -1.69
YDR029W	YDR029W	TSR4	P25040	408 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	SEC65	P29478	273 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	RGT1	P32862	1170 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	DHR2	P36009	735 aa	Predicted RBP	4.5	□□□□□ -1.69
YDR029W	YDR029W	EHT1	P38295	451 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	CKB2	P38930	258 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	PRM2	P40534	656 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	MNT3	P40549	630 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	YJR096W	P47137	282 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	GFD1	Q04839	188 aa	Known RBP	4.5	□□□□□ -1.69
YDR029W	YDR029W	TGS1	Q12052	315 aa		4.5	□□□□□ -1.69
YDR029W	YDR029W	JHD1	P40034	492 aa		4.49	□□□□□ -1.69
YDR029W	YDR029W	IES1	P43579	692 aa		4.49	□□□□□ -1.69
YDR029W	YDR029W	IDP3	P53982	420 aa	Known RBP	4.49	□□□□□ -1.69
YDR029W	YDR029W	NSE5	Q03718	556 aa		4.49	□□□□□ -1.69
YDR029W	YDR029W	BSP1	Q06604	576 aa		4.49	□□□□□ -1.69
YDR029W	YDR029W	HOP1	P20050	605 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms