RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W NUP170P38181 1502 aa2.47□□□□□ -2.01
MCD1YDL003W MLP2P40457 1679 aa2.47□□□□□ -2.01
MCD1YDL003W RAD3P06839 778 aa2.47□□□□□ -2.01
MCD1YDL003W PET123P17558 318 aa2.47□□□□□ -2.01
MCD1YDL003W MBR1P23493 339 aa2.47□□□□□ -2.01
MCD1YDL003W RAD51P25454 400 aa2.47□□□□□ -2.01
MCD1YDL003W BIT2P38346 545 aa2.47□□□□□ -2.01
MCD1YDL003W VPS41P38959 992 aa2.47□□□□□ -2.01
MCD1YDL003W PMT6P42934 759 aa2.47□□□□□ -2.01
MCD1YDL003W IRC8P47046 822 aa2.47□□□□□ -2.01
MCD1YDL003W NOP9P47077 666 aaKnown RBP2.47□□□□□ -2.01
MCD1YDL003W SNU71P53207 620 aaKnown RBP2.47□□□□□ -2.01
MCD1YDL003W TAF8Q03750 510 aa2.47□□□□□ -2.01
MCD1YDL003W ERV41Q04651 352 aa2.47□□□□□ -2.01
MCD1YDL003W NEW1Q08972 1196 aaKnown RBP2.47□□□□□ -2.01
MCD1YDL003W ECM3Q99252 613 aa2.47□□□□□ -2.01
MCD1YDL003W GEA1P47102 1408 aaPredicted RBP2.47□□□□□ -2.01
MCD1YDL003W POL1P13382 1468 aa2.47□□□□□ -2.01
MCD1YDL003W MRPL9P31334 269 aa2.46□□□□□ -2.02
MCD1YDL003W TOA1P32773 286 aa2.46□□□□□ -2.02
MCD1YDL003W RSC8P43609 557 aaKnown RBP2.46□□□□□ -2.02
MCD1YDL003W MPS3P47069 682 aa2.46□□□□□ -2.02
MCD1YDL003W YGL081WP53156 320 aa2.46□□□□□ -2.02
MCD1YDL003W PXR1P53335 271 aaPredicted RBP2.46□□□□□ -2.02
MCD1YDL003W DIP5P53388 608 aa2.46□□□□□ -2.02
MCD1YDL003W JJJ1P53863 590 aa2.46□□□□□ -2.02
MCD1YDL003W ARP5P53946 755 aa2.46□□□□□ -2.02
MCD1YDL003W YNL050CP53952 270 aa2.46□□□□□ -2.02
MCD1YDL003W TLG1Q03322 224 aa2.46□□□□□ -2.02
MCD1YDL003W GLE1Q12315 538 aa2.46□□□□□ -2.02
MCD1YDL003W Q0142Q9ZZW4 58 aa2.46□□□□□ -2.02
MCD1YDL003W NUP159P40477 1460 aa2.46□□□□□ -2.02
MCD1YDL003W REV3P14284 1504 aa2.46□□□□□ -2.02
MCD1YDL003W ARD1P07347 238 aaPredicted RBP2.45□□□□□ -2.02
MCD1YDL003W SEC15P22224 910 aa2.45□□□□□ -2.02
MCD1YDL003W MRC1P25588 1096 aa2.45□□□□□ -2.02
MCD1YDL003W VBA3P25594 458 aa2.45□□□□□ -2.02
MCD1YDL003W AAD3P25612 363 aa2.45□□□□□ -2.02
MCD1YDL003W HSP104P31539 908 aaKnown RBP2.45□□□□□ -2.02
MCD1YDL003W NTH1P32356 751 aa2.45□□□□□ -2.02
MCD1YDL003W CTP1P38152 299 aa2.45□□□□□ -2.02
MCD1YDL003W RKM3P38222 552 aa2.45□□□□□ -2.02
MCD1YDL003W EXO84P38261 753 aa2.45□□□□□ -2.02
MCD1YDL003W TOM71P38825 639 aaKnown RBP2.45□□□□□ -2.02
MCD1YDL003W SAP1P39955 897 aaKnown RBP2.45□□□□□ -2.02
MCD1YDL003W SUB1P54000 292 aaKnown RBP2.45□□□□□ -2.02
MCD1YDL003W SPO19Q03029 223 aa2.45□□□□□ -2.02
MCD1YDL003W VPS72Q03388 795 aa2.45□□□□□ -2.02
MCD1YDL003W IOC4Q04213 475 aa2.45□□□□□ -2.02
MCD1YDL003W APL5Q08951 932 aaKnown RBP2.45□□□□□ -2.02
MCD1YDL003W YOL087CQ99247 1116 aa2.45□□□□□ -2.02
MCD1YDL003W RAD50P12753 1312 aa2.45□□□□□ -2.02
MCD1YDL003W BPT1P14772 1559 aa2.45□□□□□ -2.02
MCD1YDL003W DNA2P38859 1522 aa2.45□□□□□ -2.02
MCD1YDL003W CDC37P06101 506 aaKnown RBP2.45□□□□□ -2.02
MCD1YDL003W RAD18P10862 487 aa2.45□□□□□ -2.02
MCD1YDL003W PSO2P30620 661 aa2.45□□□□□ -2.02
MCD1YDL003W PUP2P32379 260 aa2.45□□□□□ -2.02
MCD1YDL003W RPN12P32496 274 aa2.45□□□□□ -2.02
MCD1YDL003W BEM3P32873 1128 aa2.45□□□□□ -2.02
MCD1YDL003W RRP1P35178 278 aaPredicted RBP2.45□□□□□ -2.02
MCD1YDL003W ATP23P53722 227 aa2.45□□□□□ -2.02
MCD1YDL003W GIS2P53849 153 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
MCD1YDL003W TSR1Q07381 788 aaKnown RBP2.45□□□□□ -2.02
MCD1YDL003W TLG2Q08144 397 aa2.45□□□□□ -2.02
MCD1YDL003W RKI1Q12189 258 aa2.45□□□□□ -2.02
MCD1YDL003W HIF1Q12373 385 aa2.45□□□□□ -2.02
MCD1YDL003W SIN3P22579 1536 aa2.44□□□□□ -2.02
MCD1YDL003W HSL1P34244 1518 aa2.44□□□□□ -2.02
MCD1YDL003W JIP3O13555 125 aa2.44□□□□□ -2.02
MCD1YDL003W DAL5P15365 543 aa2.44□□□□□ -2.02
MCD1YDL003W SUI2P20459 304 aaKnown RBP2.44□□□□□ -2.02
MCD1YDL003W EFB1P32471 206 aaKnown RBP2.44□□□□□ -2.02
MCD1YDL003W BET3P36149 193 aa2.44□□□□□ -2.02
MCD1YDL003W RFC1P38630 861 aaKnown RBP2.44□□□□□ -2.02
MCD1YDL003W KHA1P40309 873 aa2.44□□□□□ -2.02
MCD1YDL003W ERG13P54839 491 aaKnown RBP2.44□□□□□ -2.02
MCD1YDL003W YMR102CQ03177 834 aa2.44□□□□□ -2.02
MCD1YDL003W HMO1Q03973 246 aaKnown RBP2.44□□□□□ -2.02
MCD1YDL003W ARG7Q04728 441 aa2.44□□□□□ -2.02
MCD1YDL003W SML1Q04964 104 aa2.44□□□□□ -2.02
MCD1YDL003W THI22Q06490 572 aa2.44□□□□□ -2.02
MCD1YDL003W NDL1Q06568 189 aa2.44□□□□□ -2.02
MCD1YDL003W YOR389WQ08912 624 aa2.44□□□□□ -2.02
MCD1YDL003W FLC1Q08967 793 aa2.44□□□□□ -2.02
MCD1YDL003W SSF2Q12153 453 aaPredicted RBP2.44□□□□□ -2.02
MCD1YDL003W SMC6Q12749 1114 aa2.44□□□□□ -2.02
MCD1YDL003W SNQ2P32568 1501 aaKnown RBP2.43□□□□□ -2.02
MCD1YDL003W MET5P47169 1442 aa2.43□□□□□ -2.02
MCD1YDL003W NUP157P40064 1391 aaKnown RBP2.43□□□□□ -2.02
MCD1YDL003W BIK1P11709 440 aa2.43□□□□□ -2.02
MCD1YDL003W MRPS28P21771 286 aa2.43□□□□□ -2.02
MCD1YDL003W SEC14P24280 304 aaKnown RBP2.43□□□□□ -2.02
MCD1YDL003W FEN2P25621 512 aaKnown RBP2.43□□□□□ -2.02
MCD1YDL003W NUF2P33895 451 aa2.43□□□□□ -2.02
MCD1YDL003W YNL195CP40168 261 aa2.43□□□□□ -2.02
MCD1YDL003W VID30P53076 958 aa2.43□□□□□ -2.02
MCD1YDL003W HST1P53685 503 aa2.43□□□□□ -2.02
MCD1YDL003W TIM50Q02776 476 aa2.43□□□□□ -2.02
MCD1YDL003W UFO1Q04511 668 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms