RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	YOR387C	Q08910	206 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	YRR1	Q12172	810 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	LCB4	Q12246	624 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	ARP7	Q12406	477 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	RIP-Chip
ATG12	YBR217W	HIS5	P07172	385 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	MST1	P07236	462 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	PUT4	P15380	627 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	VNX1	P42839	908 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	OSW7	P43611	510 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	YGR021W	P53212	290 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	COQ6	P53318	479 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	YGR283C	P53336	341 aa	Predicted RBP	6.08	□□□□□ -1.44
ATG12	YBR217W	PIR3	Q03180	325 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	UTP5	Q04177	643 aa	Known RBP	6.08	□□□□□ -1.44
ATG12	YBR217W	VPS38	Q05919	439 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	YLR001C	Q07895	862 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	THI20	Q08224	551 aa		6.08	□□□□□ -1.44
ATG12	YBR217W	CLC1	P17891	233 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	RAD57	P25301	460 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	CAP1	P28495	268 aa	Known RBP	6.07	□□□□□ -1.44
ATG12	YBR217W	SEC1	P30619	724 aa	Known RBP	6.07	□□□□□ -1.44
ATG12	YBR217W	HSP78	P33416	811 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	TMN3	P40071	706 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	ASG1	P40467	964 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	YIL054W	P40524	105 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	UFE1	P41834	346 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	ART5	P53244	586 aa	Known RBP	6.07	□□□□□ -1.44
ATG12	YBR217W	KTR6	P54070	446 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	SYH1	Q02875	849 aa	Known RBP	6.07	□□□□□ -1.44
ATG12	YBR217W	SEG1	Q04279	960 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	AIM32	Q04689	311 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	YDR278C	Q05612	105 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	PMT7	Q06644	662 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	YCG1	Q06680	1035 aa		6.07	□□□□□ -1.44
ATG12	YBR217W	ACC1	Q00955	2233 aa	Known RBP	6.06	□□□□□ -1.44
ATG12	YBR217W	CCP1	P00431	361 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	ERG11	P10614	530 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	TRX1	P22217	103 aa	Known RBP	6.06	□□□□□ -1.44
ATG12	YBR217W	PSE1	P32337	1089 aa	Known RBP	6.06	□□□□□ -1.44
ATG12	YBR217W	ABD1	P32783	436 aa	Predicted RBP	6.06	□□□□□ -1.44
ATG12	YBR217W	MFT1	P33441	392 aa	Known RBP	6.06	□□□□□ -1.44
ATG12	YBR217W	ATG12	P38316	186 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	ARP1	P38696	384 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	PSY2	P40164	858 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	SAP185	P40856	1058 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	CHS6	P40955	746 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	TUB4	P53378	473 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	TRM112	P53738	135 aa	Predicted RBP	6.06	□□□□□ -1.44
ATG12	YBR217W	JJJ1	P53863	590 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	SXM1	Q04175	944 aa	Known RBP	6.06	□□□□□ -1.44
ATG12	YBR217W	SOV1	Q04748	898 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	NSE1	Q07913	336 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	AIR2	Q12476	344 aa	Known RBP	6.06	□□□□□ -1.44
ATG12	YBR217W	VPS5	Q92331	675 aa		6.06	□□□□□ -1.44
ATG12	YBR217W	SEN1	Q00416	2231 aa	Known RBP	6.05	□□□□□ -1.44
ATG12	YBR217W	ENO2	P00925	437 aa	Known RBP	6.05	□□□□□ -1.44
ATG12	YBR217W	ADE3	P07245	946 aa	Known RBP	6.05	□□□□□ -1.44
ATG12	YBR217W	CYC8	P14922	966 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	MRM1	P25270	412 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	YIH1	P25637	258 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	STE5	P32917	917 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	SWE1	P32944	819 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	SEG2	P34250	1132 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	BLI1	P35727	113 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	EBP2	P36049	427 aa	Known RBP	6.05	□□□□□ -1.44
ATG12	YBR217W	KTR4	P38131	464 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	ECM13	P38195	257 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	SWC5	P38326	303 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	RRT2	P38332	387 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	URA8	P38627	578 aa	Predicted RBP	6.05	□□□□□ -1.44
ATG12	YBR217W	LYS9	P38999	446 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	YNR061C	P53747	219 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	BET4	Q00618	327 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	TOF2	Q02208	771 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	DIG1	Q03063	452 aa	Known RBP	6.05	□□□□□ -1.44
ATG12	YBR217W	RKM2	Q03942	479 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	YMR018W	Q04364	514 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	ECM38	Q05902	660 aa	Predicted RBP	6.05	□□□□□ -1.44
ATG12	YBR217W	DAS2	Q12084	232 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	6.05	□□□□□ -1.44	not detected
ATG12	YBR217W	SVS1	Q12254	260 aa		6.05	□□□□□ -1.44
ATG12	YBR217W	HSF1	P10961	833 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	FUS1	P11710	512 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	REV1	P12689	985 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	KIN3	P22209	435 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	MET22	P32179	357 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	DBF4	P32325	704 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	SPC110	P32380	944 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	SGE1	P33335	543 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	HIS2	P38635	335 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	TCD1	P38756	429 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	NEM1	P38757	446 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	DOT6	P40059	670 aa	Known RBP	6.04	□□□□□ -1.44
ATG12	YBR217W	KHA1	P40309	873 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	SEC9	P40357	651 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	TMA108	P40462	946 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	EFM4	P40516	257 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	GYP8	P43570	497 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	CNN1	P43618	361 aa		6.04	□□□□□ -1.44

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