RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	MFM1	Q02783	413 aa		6.12	□□□□□ -1.43
RBD2	YPL246C	VTI1	Q04338	217 aa		6.12	□□□□□ -1.43
RBD2	YPL246C	YDR278C	Q05612	105 aa		6.12	□□□□□ -1.43
RBD2	YPL246C	FUS2	Q05670	677 aa		6.12	□□□□□ -1.43
RBD2	YPL246C	OMS1	Q06668	471 aa		6.12	□□□□□ -1.43
RBD2	YPL246C	PLP2	Q12017	286 aa		6.12	□□□□□ -1.43
RBD2	YPL246C	YLR122C	Q12312	125 aa		6.12	□□□□□ -1.43
RBD2	YPL246C	GLT1	Q12680	2145 aa	Known RBP	6.12	□□□□□ -1.43
RBD2	YPL246C	TOP1	P04786	769 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
RBD2	YPL246C	HEM13	P11353	328 aa	Known RBP	6.11	□□□□□ -1.43
RBD2	YPL246C	ADP1	P25371	1049 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	SRO9	P25567	434 aa	Known RBP	6.11	□□□□□ -1.43
RBD2	YPL246C	JNM1	P36224	373 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	YBL028C	P38202	106 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	CST26	P38226	397 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	TDA3	P38758	523 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	TIF4631	P39935	952 aa	Known RBP	6.11	□□□□□ -1.43
RBD2	YPL246C	NUP82	P40368	713 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	SPO74	P45819	413 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	DIP5	P53388	608 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	ORC4	P54791	529 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	YPR078C	Q06813	372 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	WHI4	Q07655	649 aa	Known RBP	6.11	□□□□□ -1.43
RBD2	YPL246C	LAP2	Q10740	671 aa		6.11	□□□□□ -1.43
RBD2	YPL246C	TRP2	P00899	507 aa	Known RBP	6.1	□□□□□ -1.43
RBD2	YPL246C	ARG4	P04076	463 aa	Predicted RBP	6.1	□□□□□ -1.43
RBD2	YPL246C	PYC1	P11154	1178 aa	Known RBP	6.1	□□□□□ -1.43
RBD2	YPL246C	KRS1	P15180	591 aa	Known RBP	6.1	□□□□□ -1.43
RBD2	YPL246C	YKL222C	P35995	705 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	ADD66	P36040	267 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	KEL1	P38853	1164 aa	Known RBP	6.1	□□□□□ -1.43
RBD2	YPL246C	SMC2	P38989	1170 aa	Known RBP	6.1	□□□□□ -1.43
RBD2	YPL246C	YAR028W	P39548	234 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	PES4	P39684	611 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	YNL320W	P42840	284 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	CTR1	P49573	406 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	ARK1	P53974	638 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	UTP14	Q04500	899 aa	Known RBP	6.1	□□□□□ -1.43
RBD2	YPL246C	OPY2	Q06810	360 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	YPL225W	Q08971	146 aa	Known RBP	6.1	□□□□□ -1.43
RBD2	YPL246C	YPL277C	Q08989	487 aa		6.1	□□□□□ -1.43
RBD2	YPL246C	CDC8	P00572	216 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	PRP9	P19736	530 aa	Known RBP	6.09	□□□□□ -1.43
RBD2	YPL246C	PRP22	P24384	1145 aa	Known RBP	6.09	□□□□□ -1.43
RBD2	YPL246C	NFU1	P32860	256 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	SMY2	P32909	740 aa	Known RBP	6.09	□□□□□ -1.43
RBD2	YPL246C	NIP100	P33420	868 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	NNK1	P36003	928 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	YKL023W	P36103	277 aa	Known RBP	6.09	□□□□□ -1.43
RBD2	YPL246C	LAS1	P36146	502 aa	Predicted RBP	6.09	□□□□□ -1.43
RBD2	YPL246C	MAD1	P40957	749 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	FMS1	P50264	508 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	KAP114	P53067	1004 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	TOF1	P53840	1238 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	SDH5	Q08230	162 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	ARP6	Q12509	438 aa		6.09	□□□□□ -1.43
RBD2	YPL246C	PMA1	P05030	918 aa	Known RBP	6.08	□□□□□ -1.44
RBD2	YPL246C	RPS4A	P0CX35	261 aa	Known RBP	6.08	□□□□□ -1.44
RBD2	YPL246C	RPS4B	P0CX36	261 aa	Known RBP	6.08	□□□□□ -1.44
RBD2	YPL246C	MSB1	P21339	1137 aa	Known RBP	6.08	□□□□□ -1.44
RBD2	YPL246C	NFS1	P25374	497 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	CDC11	P32458	415 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	UBP11	P36026	717 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	RCK2	P38623	610 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	HSE1	P38753	452 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	SDS3	P40505	327 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	LCB2	P40970	561 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	GPD2	P41911	440 aa	Known RBP	6.08	□□□□□ -1.44
RBD2	YPL246C	VPS4	P52917	437 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	RIM8	P53179	542 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	YGL039W	P53183	348 aa	Known RBP	6.08	□□□□□ -1.44
RBD2	YPL246C	SNU71	P53207	620 aa	Known RBP	6.08	□□□□□ -1.44
RBD2	YPL246C	LSB1	P53281	241 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	YNR063W	P53749	607 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	RKM2	Q03942	479 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	ECI1	Q05871	280 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	STE23	Q06010	1027 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	RUD3	Q12234	484 aa	Known RBP	6.08	□□□□□ -1.44
RBD2	YPL246C	MED1	Q12321	566 aa		6.08	□□□□□ -1.44
RBD2	YPL246C	TRZ1	P36159	838 aa	Predicted RBP	6.07	□□□□□ -1.44
RBD2	YPL246C	NMD5	P46970	1048 aa		6.07	□□□□□ -1.44
RBD2	YPL246C	BRO1	P48582	844 aa		6.07	□□□□□ -1.44
RBD2	YPL246C	ALT1	P52893	592 aa		6.07	□□□□□ -1.44
RBD2	YPL246C	YGR021W	P53212	290 aa		6.07	□□□□□ -1.44
RBD2	YPL246C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	RIP-Chip
RBD2	YPL246C	YLR297W	Q05899	129 aa		6.07	□□□□□ -1.44
RBD2	YPL246C	HDA2	Q06629	674 aa		6.07	□□□□□ -1.44
RBD2	YPL246C	CSR1	Q06705	408 aa	Known RBP	6.07	□□□□□ -1.44
RBD2	YPL246C	GCR1	P07261	785 aa		6.06	□□□□□ -1.44
RBD2	YPL246C	SRD1	P09007	221 aa		6.06	□□□□□ -1.44
RBD2	YPL246C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
RBD2	YPL246C	YKL050C	P35736	922 aa		6.06	□□□□□ -1.44
RBD2	YPL246C	PHO88	P38264	188 aa	Predicted RBP	6.06	□□□□□ -1.44
RBD2	YPL246C	ERC1	P38767	581 aa		6.06	□□□□□ -1.44
RBD2	YPL246C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
RBD2	YPL246C	SEC5	P89102	971 aa		6.06	□□□□□ -1.44
RBD2	YPL246C	TMA64	Q04600	565 aa	Known RBP	6.06	□□□□□ -1.44
RBD2	YPL246C	MRL1	Q06815	381 aa		6.06	□□□□□ -1.44
RBD2	YPL246C	YOR059C	Q08448	450 aa	Known RBP	6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms