RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	MEX67	Q99257	599 aa	Known RBP	4.09	□□□□□ -1.75
SGN1	YIR001C	FMP27	Q06179	2628 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	COX4	P04037	155 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	CDC6	P09119	513 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	MATALPHA2	P0CY08	210 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	HMLALPHA2	P0CY09	210 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	CBP3	P21560	335 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	VPS3	P23643	1011 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SGN1	YIR001C	RPC53	P25441	422 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	PRR1	P28708	518 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	SIP3	P38717	1229 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	PIH1	P38768	344 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	NEO1	P40527	1151 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	BUD6	P41697	788 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SGN1	YIR001C	SAM37	P50110	327 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	SHE10	P53075	577 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	CAF130	P53280	1122 aa	Predicted RBP	4.08	□□□□□ -1.76
SGN1	YIR001C	YNR065C	P53751	1116 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	CBK1	P53894	756 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	TRS130	Q03660	1102 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	EIS1	Q05050	843 aa	Known RBP	4.08	□□□□□ -1.76
SGN1	YIR001C	FMP25	Q08023	583 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	MCA1	Q08601	432 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	ELG1	Q12050	791 aa		4.08	□□□□□ -1.76
SGN1	YIR001C	NAM7	P30771	971 aa	Known RBP	4.07	□□□□□ -1.76
SGN1	YIR001C	CYS3	P31373	394 aa	Known RBP	4.07	□□□□□ -1.76
SGN1	YIR001C	COQ2	P32378	372 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	ECM32	P32644	1121 aa	Known RBP	4.07	□□□□□ -1.76
SGN1	YIR001C	UBP13	P38187	747 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	MMS4	P38257	691 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	YHL008C	P38750	627 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	MED6	P38782	295 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	VTC2	P43585	828 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	ZAP1	P47043	880 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	RSM26	P47141	266 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	ENV11	P53246	860 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	SPC98	P53540	846 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	RTC4	P53850	401 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	IMP4	P53941	290 aa	Known RBP	4.07	□□□□□ -1.76
SGN1	YIR001C	CTR9	P89105	1077 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	STP1	Q00947	519 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	ADA2	Q02336	434 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	HAS1	Q03532	505 aa	Known RBP	4.07	□□□□□ -1.76
SGN1	YIR001C	FUS2	Q05670	677 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	NUT2	Q06213	157 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	PMT7	Q06644	662 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	SHS1	Q07657	551 aa		4.07	□□□□□ -1.76
SGN1	YIR001C	PDH1	Q12428	516 aa	Known RBP	4.07	□□□□□ -1.76
SGN1	YIR001C	CET1	O13297	549 aa	Predicted RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	FLP1	P03870	423 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	GAL80	P04387	435 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	SSB1	P11484	613 aa	Known RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	PFK1	P16861	987 aa	Known RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	GCD6	P32501	712 aa	Known RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	TRM2	P33753	639 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	RIM11	P38615	370 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	PPX1	P38698	397 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	NMD3	P38861	518 aa	Known RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	UBP5	P39944	805 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	SSB2	P40150	613 aa	Known RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	NUP82	P40368	713 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	GYP8	P43570	497 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	TAF1	P46677	1066 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	FYV8	P46949	817 aa	Known RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	VPS25	P47142	202 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	ENT3	P47160	408 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	GCV1	P48015	400 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	YNR061C	P53747	219 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	SLG1	P54867	378 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	VTC3	Q02725	835 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	YIG1	Q08956	461 aa		4.06	□□□□□ -1.76
SGN1	YIR001C	LEA1	Q08963	238 aa	Predicted RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	GET3	Q12154	354 aa	Known RBP	4.06	□□□□□ -1.76
SGN1	YIR001C	MSB2	P32334	1306 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	RPL4A	P10664	362 aa	Known RBP	4.05	□□□□□ -1.76
SGN1	YIR001C	ALG1	P16661	449 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	CKA2	P19454	339 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	NPR1	P22211	790 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	SPO11	P23179	398 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	MSH2	P25847	964 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	CSE1	P33307	960 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	PET10	P36139	283 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	DUG2	P38149	878 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	YHL017W	P38745	532 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	NEM1	P38757	446 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	BTT1	P40314	149 aa	Predicted RBP	4.05	□□□□□ -1.76
SGN1	YIR001C	POL31	P46957	487 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	CCM1	P48237	864 aa	Predicted RBP	4.05	□□□□□ -1.76
SGN1	YIR001C	RPL4B	P49626	362 aa	Known RBP	4.05	□□□□□ -1.76
SGN1	YIR001C	ORC5	P50874	479 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	PSP1	P50896	841 aa	Known RBP	4.05	□□□□□ -1.76
SGN1	YIR001C	TOF1	P53840	1238 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	ARK1	P53974	638 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	TIF35	Q04067	274 aa	Known RBP	4.05	□□□□□ -1.76
SGN1	YIR001C	UTP14	Q04500	899 aa	Known RBP	4.05	□□□□□ -1.76
SGN1	YIR001C	ADY4	Q05955	493 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	YLR407W	Q06070	228 aa		4.05	□□□□□ -1.76
SGN1	YIR001C	PSK2	Q08217	1101 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms