RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	AFT2	Q08957	416 aa		4.27	□□□□□ -1.73
VID28	YIL017C	SSF2	Q12153	453 aa	Predicted RBP	4.27	□□□□□ -1.73
VID28	YIL017C	NCR1	Q12200	1170 aa		4.27	□□□□□ -1.73
VID28	YIL017C	STB3	Q12427	513 aa		4.27	□□□□□ -1.73
VID28	YIL017C	FRT1	Q99332	602 aa		4.27	□□□□□ -1.73
VID28	YIL017C	SBP1	P10080	294 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	HMG2	P12684	1045 aa		4.26	□□□□□ -1.73
VID28	YIL017C	EXO70	P19658	623 aa		4.26	□□□□□ -1.73
VID28	YIL017C	PLC1	P32383	869 aa		4.26	□□□□□ -1.73
VID28	YIL017C	VMA8	P32610	256 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	MRE11	P32829	692 aa		4.26	□□□□□ -1.73
VID28	YIL017C	HES1	P35843	434 aa		4.26	□□□□□ -1.73
VID28	YIL017C	PPS1	P38148	807 aa		4.26	□□□□□ -1.73
VID28	YIL017C	YHR112C	P38716	378 aa		4.26	□□□□□ -1.73
VID28	YIL017C	RPH1	P39956	796 aa		4.26	□□□□□ -1.73
VID28	YIL017C	EMW1	P42842	904 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	ESF2	P53743	316 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	BNI5	P53890	448 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	RRN11	Q04712	507 aa		4.26	□□□□□ -1.73
VID28	YIL017C	COX20	Q04935	205 aa		4.26	□□□□□ -1.73
VID28	YIL017C	SIL1	Q08199	421 aa		4.26	□□□□□ -1.73
VID28	YIL017C	SMC5	Q08204	1093 aa		4.26	□□□□□ -1.73
VID28	YIL017C	ILV2	P07342	687 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	ATR1	P13090	542 aa		4.26	□□□□□ -1.73
VID28	YIL017C	ADY2	P25613	283 aa		4.26	□□□□□ -1.73
VID28	YIL017C	SSE1	P32589	693 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	SAS3	P34218	831 aa		4.26	□□□□□ -1.73
VID28	YIL017C	SET5	P38890	526 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	CRG1	P38892	291 aa	RIP-Chip data	4.26	□□□□□ -1.73	RIP-Chip
VID28	YIL017C	JJJ2	P46997	583 aa		4.26	□□□□□ -1.73
VID28	YIL017C	IMD3	P50095	523 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	KAP114	P53067	1004 aa		4.26	□□□□□ -1.73
VID28	YIL017C	MDM36	Q06820	579 aa		4.26	□□□□□ -1.73
VID28	YIL017C	GAS4	Q08271	471 aa		4.26	□□□□□ -1.73
VID28	YIL017C	RTC5	Q12108	567 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	GET3	Q12154	354 aa	Known RBP	4.26	□□□□□ -1.73
VID28	YIL017C	TIP41	Q12199	356 aa		4.26	□□□□□ -1.73
VID28	YIL017C	NSI1	Q12457	570 aa		4.26	□□□□□ -1.73
VID28	YIL017C	YPT6	Q99260	215 aa		4.26	□□□□□ -1.73
VID28	YIL017C	GFA1	P14742	717 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	RGP1	P16664	663 aa		4.25	□□□□□ -1.73
VID28	YIL017C	PEX1	P24004	1043 aa		4.25	□□□□□ -1.73
VID28	YIL017C	SMC1	P32908	1225 aa		4.25	□□□□□ -1.73
VID28	YIL017C	SMY2	P32909	740 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	IXR1	P33417	597 aa		4.25	□□□□□ -1.73
VID28	YIL017C	CLG1	P35190	452 aa		4.25	□□□□□ -1.73
VID28	YIL017C	SEC31	P38968	1273 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	DLD3	P39976	496 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	RIC1	P40395	1056 aa		4.25	□□□□□ -1.73
VID28	YIL017C	SWP82	P43554	623 aa		4.25	□□□□□ -1.73
VID28	YIL017C	RPC17	P47076	161 aa		4.25	□□□□□ -1.73
VID28	YIL017C	UBA2	P52488	636 aa		4.25	□□□□□ -1.73
VID28	YIL017C	IMP4	P53941	290 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	PNG1	Q02890	363 aa		4.25	□□□□□ -1.73
VID28	YIL017C	DCS1	Q06151	350 aa		4.25	□□□□□ -1.73
VID28	YIL017C	VPS36	Q06696	566 aa		4.25	□□□□□ -1.73
VID28	YIL017C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
VID28	YIL017C	RCN2	Q12044	265 aa		4.25	□□□□□ -1.73
VID28	YIL017C	EMP46	Q12396	444 aa		4.25	□□□□□ -1.73
VID28	YIL017C	YLR278C	Q05854	1341 aa		4.25	□□□□□ -1.73
VID28	YIL017C	PDE2	P06776	526 aa		4.25	□□□□□ -1.73
VID28	YIL017C	TPO5	P36029	618 aa		4.25	□□□□□ -1.73
VID28	YIL017C	GRS1	P38088	690 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
VID28	YIL017C	FTR1	P40088	404 aa		4.25	□□□□□ -1.73
VID28	YIL017C	SAD1	P43589	448 aa		4.25	□□□□□ -1.73
VID28	YIL017C	IRC5	P43610	853 aa		4.25	□□□□□ -1.73
VID28	YIL017C	ALG2	P43636	503 aa		4.25	□□□□□ -1.73
VID28	YIL017C	YGR122W	P53272	402 aa		4.25	□□□□□ -1.73
VID28	YIL017C	TOF1	P53840	1238 aa		4.25	□□□□□ -1.73
VID28	YIL017C	ORC3	P54790	616 aa		4.25	□□□□□ -1.73
VID28	YIL017C	UBP2	Q01476	1272 aa		4.25	□□□□□ -1.73
VID28	YIL017C	MTG1	Q03151	367 aa	Predicted RBP	4.25	□□□□□ -1.73
VID28	YIL017C	YMR187C	Q03236	431 aa		4.25	□□□□□ -1.73
VID28	YIL017C	YMR114C	Q04471	368 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	RNH1	Q04740	348 aa		4.25	□□□□□ -1.73
VID28	YIL017C	CSR1	Q06705	408 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	VHS3	Q08438	674 aa		4.25	□□□□□ -1.73
VID28	YIL017C	FLO11	P08640	1367 aa		4.25	□□□□□ -1.73
VID28	YIL017C	ALG1	P16661	449 aa		4.25	□□□□□ -1.73
VID28	YIL017C	ICL1	P28240	557 aa	Predicted RBP	4.25	□□□□□ -1.73
VID28	YIL017C	UTP9	P38882	575 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	THI6	P41835	540 aa		4.25	□□□□□ -1.73
VID28	YIL017C	LIF1	P53150	421 aa		4.25	□□□□□ -1.73
VID28	YIL017C	YGR021W	P53212	290 aa		4.25	□□□□□ -1.73
VID28	YIL017C	DCP2	P53550	970 aa	Known RBP	4.25	□□□□□ -1.73
VID28	YIL017C	RTC4	P53850	401 aa		4.25	□□□□□ -1.73
VID28	YIL017C	OSH6	Q02201	448 aa		4.25	□□□□□ -1.73
VID28	YIL017C	ISU1	Q03020	165 aa		4.25	□□□□□ -1.73
VID28	YIL017C	MTC5	Q03897	1148 aa		4.25	□□□□□ -1.73
VID28	YIL017C	TDA9	Q04545	1251 aa		4.25	□□□□□ -1.73
VID28	YIL017C	NUT2	Q06213	157 aa		4.25	□□□□□ -1.73
VID28	YIL017C	RUP1	Q12242	671 aa		4.25	□□□□□ -1.73
VID28	YIL017C	ARP6	Q12509	438 aa		4.25	□□□□□ -1.73
VID28	YIL017C	IPP1	P00817	287 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	ATP6	P00854	259 aa		4.24	□□□□□ -1.73
VID28	YIL017C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
VID28	YIL017C	DBP5	P20449	482 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	RET1	P22276	1149 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	CMK2	P22517	447 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms