RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	MDM38	Q08179	573 aa		5.77	□□□□□ -1.49
SHE10	YGL228W	ZRT2	Q12436	422 aa		5.77	□□□□□ -1.49
SHE10	YGL228W	RAD10	P06838	210 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	RPO26	P20435	155 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	LRE1	P25579	583 aa	Known RBP	5.76	□□□□□ -1.49
SHE10	YGL228W	GAC1	P28006	793 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	SEC1	P30619	724 aa	Known RBP	5.76	□□□□□ -1.49
SHE10	YGL228W	SLA2	P33338	968 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	APM2	P38700	605 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	YHR202W	P38887	602 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	END3	P39013	349 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	KHA1	P40309	873 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	MAD1	P40957	749 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	PNG1	Q02890	363 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	ELP3	Q02908	557 aa	Known RBP	5.76	□□□□□ -1.49
SHE10	YGL228W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
SHE10	YGL228W	AIM41	Q12032	185 aa		5.76	□□□□□ -1.49
SHE10	YGL228W	HAP2	P06774	265 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	TRX1	P22217	103 aa	Known RBP	5.75	□□□□□ -1.49
SHE10	YGL228W	GCD6	P32501	712 aa	Known RBP	5.75	□□□□□ -1.49
SHE10	YGL228W	AVT2	P39981	480 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	MKT1	P40850	830 aa	Known RBP	5.75	□□□□□ -1.49
SHE10	YGL228W	YFL040W	P43562	540 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	ATG36	P46983	293 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	PFD1	P46988	109 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	YMR187C	Q03236	431 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	ERV41	Q04651	352 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	IVY1	Q04934	453 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	AIM39	Q08223	395 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	YRR1	Q12172	810 aa		5.75	□□□□□ -1.49
SHE10	YGL228W	NOP58	Q12499	511 aa	Known RBP	5.75	□□□□□ -1.49
SHE10	YGL228W	PRC1	P00729	532 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	MSD1	P15179	658 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	PUT4	P15380	627 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	PRP9	P19736	530 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
SHE10	YGL228W	GPI10	P30777	616 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	CNS1	P33313	385 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	SRB2	P34162	210 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	RRP1	P35178	278 aa	Predicted RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	MRPL7	P36519	292 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	YBR056W	P38081	501 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	YBR284W	P38150	797 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
SHE10	YGL228W	RFS1	P38234	210 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	SIF2	P38262	535 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	PMC1	P38929	1173 aa	Predicted RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	YEL023C	P39992	682 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	YNL320W	P42840	284 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	MIC19	P43594	170 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	NMD5	P46970	1048 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	SKY1	Q03656	742 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	PRM6	Q04705	352 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	RCL1	Q08096	367 aa	Predicted RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	WHI3	P34761	661 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	KDX1	P36005	433 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	HMT1	P38074	348 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	SHE3	P38272	425 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	PCM1	P38628	557 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	MMS21	P38632	267 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	RIM4	P38741	713 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	NMD3	P38861	518 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	YIL054W	P40524	105 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	YFL052W	P43551	465 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	ALY2	P47029	1046 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	INP52	P50942	1183 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	MTG1	Q03151	367 aa	Predicted RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	SXM1	Q04175	944 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	NOP6	Q07623	225 aa	Known RBP	5.74	□□□□□ -1.49
SHE10	YGL228W	DDC1	Q08949	612 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	GPM2	Q12008	311 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	NUR1	Q12066	484 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	APM4	Q99186	491 aa		5.74	□□□□□ -1.49
SHE10	YGL228W	SFL1	P20134	766 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	TKL2	P33315	681 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	MAP2	P38174	421 aa	Known RBP	5.73	□□□□□ -1.49
SHE10	YGL228W	APN2	P38207	520 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	HSL7	P38274	827 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	SWC5	P38326	303 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	PCA1	P38360	1216 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	MSG5	P38590	489 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	JHD1	P40034	492 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	NUT1	P53114	1132 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	YPL062W	Q02781	134 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	EMI2	Q04409	500 aa	Known RBP	5.73	□□□□□ -1.49
SHE10	YGL228W	ACM1	Q08981	209 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	SAM3	Q08986	587 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	HRT3	Q12347	344 aa		5.73	□□□□□ -1.49
SHE10	YGL228W	PMS1	P14242	873 aa		5.72	□□□□□ -1.49
SHE10	YGL228W	AEP2	P22136	580 aa		5.72	□□□□□ -1.49
SHE10	YGL228W	HXT3	P32466	567 aa	Known RBP	5.72	□□□□□ -1.49
SHE10	YGL228W	PEP7	P32609	515 aa		5.72	□□□□□ -1.49
SHE10	YGL228W	TIF5	P38431	405 aa	Known RBP	5.72	□□□□□ -1.49
SHE10	YGL228W	SAW1	P39735	261 aa		5.72	□□□□□ -1.49
SHE10	YGL228W	PRK1	P40494	810 aa		5.72	□□□□□ -1.49
SHE10	YGL228W	YJL045W	P47052	634 aa		5.72	□□□□□ -1.49
SHE10	YGL228W	YGR283C	P53336	341 aa	Predicted RBP	5.72	□□□□□ -1.49
SHE10	YGL228W	YNL040W	P53960	456 aa	Predicted RBP	5.72	□□□□□ -1.49
SHE10	YGL228W	CDC55	Q00362	526 aa		5.72	□□□□□ -1.49
SHE10	YGL228W	BET4	Q00618	327 aa		5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms