RNA–Protein interactions for RNA: YEL058W

PCM1, Transcript of Essential N-acetylglucosamine-phosphate mutase, yeast

Gene PCM1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCM1	YEL058W	ECM2	P38241	364 aa	Known RBP	11.94	□□□□□ -0.5
PCM1	YEL058W	SPP381	P38282	291 aa	Predicted RBP	11.94	□□□□□ -0.5
PCM1	YEL058W	MSG5	P38590	489 aa		11.94	□□□□□ -0.5
PCM1	YEL058W	RCR2	Q03446	210 aa	Known RBP	11.94	□□□□□ -0.5
PCM1	YEL058W	REC8	Q12188	680 aa		11.94	□□□□□ -0.5
PCM1	YEL058W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	not detected
PCM1	YEL058W	GAC1	P28006	793 aa		11.93	□□□□□ -0.5
PCM1	YEL058W	ABZ1	P37254	787 aa	Predicted RBP	11.93	□□□□□ -0.5
PCM1	YEL058W	SWC5	P38326	303 aa		11.93	□□□□□ -0.5
PCM1	YEL058W	CIN4	P39110	191 aa		11.93	□□□□□ -0.5
PCM1	YEL058W	SAP1	P39955	897 aa	Known RBP	11.93	□□□□□ -0.5
PCM1	YEL058W	YGR035C	P53222	116 aa		11.93	□□□□□ -0.5
PCM1	YEL058W	YPL034W	Q03083	165 aa		11.93	□□□□□ -0.5
PCM1	YEL058W	ECM30	Q06673	1274 aa		11.93	□□□□□ -0.5
PCM1	YEL058W	YRR1	Q12172	810 aa		11.93	□□□□□ -0.5
PCM1	YEL058W	TPK1	P06244	397 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	RAD10	P06838	210 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	CIT2	P08679	460 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	BIO2	P32451	375 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	PCA1	P38360	1216 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	BRL1	P38770	471 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	YMR134W	P40207	237 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	KHA1	P40309	873 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	ATG36	P46983	293 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	YML6	P51998	286 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	SPC98	P53540	846 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	ESC8	Q08119	714 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	MDM38	Q08179	573 aa		11.92	□□□□□ -0.5
PCM1	YEL058W	GAL80	P04387	435 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	SDH2	P21801	266 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	AEP2	P22136	580 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	LRE1	P25579	583 aa	Known RBP	11.91	□□□□□ -0.5
PCM1	YEL058W	ECM32	P32644	1121 aa	Known RBP	11.91	□□□□□ -0.5
PCM1	YEL058W	AVT3	P36062	692 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	SPO74	P45819	413 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	KAP95	Q06142	861 aa	Known RBP	11.91	□□□□□ -0.5
PCM1	YEL058W	PKH2	Q12236	1081 aa	Known RBP	11.91	□□□□□ -0.5
PCM1	YEL058W	RAD1	P06777	1100 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	SRB2	P34162	210 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	SHE3	P38272	425 aa	Known RBP	11.91	□□□□□ -0.5
PCM1	YEL058W	SLX1	P38324	304 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	SIP5	P40210	489 aa	Known RBP	11.91	□□□□□ -0.5
PCM1	YEL058W	YIL054W	P40524	105 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	SLG1	P54867	378 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	RPL22B	P56628	122 aa	Known RBP	11.91	□□□□□ -0.5
PCM1	YEL058W	FMP30	Q02883	468 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	ELP3	Q02908	557 aa	Known RBP	11.91	□□□□□ -0.5
PCM1	YEL058W	ACM1	Q08981	209 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	YDR018C	Q12185	396 aa		11.91	□□□□□ -0.5
PCM1	YEL058W	POA1	P38218	177 aa		11.9	□□□□□ -0.5
PCM1	YEL058W	VHC1	P38329	1120 aa		11.9	□□□□□ -0.5
PCM1	YEL058W	PFD1	P46988	109 aa		11.9	□□□□□ -0.5
PCM1	YEL058W	CDC55	Q00362	526 aa		11.9	□□□□□ -0.5
PCM1	YEL058W	THI7	Q05998	598 aa		11.9	□□□□□ -0.5
PCM1	YEL058W	GPI10	P30777	616 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	PLC1	P32383	869 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	SLA2	P33338	968 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	GRS1	P38088	690 aa	Known RBP	11.89	□□□□□ -0.51
PCM1	YEL058W	XDJ1	P39102	459 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	ARG2	P40360	574 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	TMA108	P40462	946 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	YNL040W	P53960	456 aa	Predicted RBP	11.89	□□□□□ -0.51
PCM1	YEL058W	STE23	Q06010	1027 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	SDH5	Q08230	162 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	VPS5	Q92331	675 aa		11.89	□□□□□ -0.51
PCM1	YEL058W	PEP5	P12868	1029 aa		11.88	□□□□□ -0.51
PCM1	YEL058W	MKT1	P40850	830 aa	Known RBP	11.88	□□□□□ -0.51
PCM1	YEL058W	CTK3	P46963	296 aa	Predicted RBP	11.88	□□□□□ -0.51
PCM1	YEL058W	YJL045W	P47052	634 aa		11.88	□□□□□ -0.51
PCM1	YEL058W	YJR039W	P47107	1121 aa		11.88	□□□□□ -0.51
PCM1	YEL058W	TAF9	Q05027	157 aa		11.88	□□□□□ -0.51
PCM1	YEL058W	SFH1	Q06168	426 aa		11.88	□□□□□ -0.51
PCM1	YEL058W	HAP2	P06774	265 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	ERP2	P39704	215 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	AVT2	P39981	480 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	INA22	P40576	216 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	YNL247W	P53852	767 aa	Known RBP	11.87	□□□□□ -0.51
PCM1	YEL058W	YNL108C	P53929	270 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	YNL011C	P53980	444 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	CIR2	Q08822	631 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	YML002W	P0CF17	737 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	SPO16	P17122	198 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	CAD1	P24813	409 aa	Known RBP	11.87	□□□□□ -0.51
PCM1	YEL058W	MEI4	P29467	408 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	PAM1	P37304	830 aa	Known RBP	11.87	□□□□□ -0.51
PCM1	YEL058W	LYS9	P38999	446 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	SAP185	P40856	1058 aa		11.87	□□□□□ -0.51
PCM1	YEL058W	FOL2	P51601	243 aa	Known RBP	11.87	□□□□□ -0.51
PCM1	YEL058W	UTP13	Q05946	817 aa	Known RBP	11.87	□□□□□ -0.51
PCM1	YEL058W	RUD3	Q12234	484 aa	Known RBP	11.87	□□□□□ -0.51
PCM1	YEL058W	SLY1	P22213	666 aa		11.86	□□□□□ -0.51
PCM1	YEL058W	MRPL7	P36519	292 aa		11.86	□□□□□ -0.51
PCM1	YEL058W	CCL1	P37366	393 aa		11.86	□□□□□ -0.51
PCM1	YEL058W	POP4	P38336	279 aa		11.86	□□□□□ -0.51
PCM1	YEL058W	YHR202W	P38887	602 aa		11.86	□□□□□ -0.51
PCM1	YEL058W	FLC2	P39719	783 aa		11.86	□□□□□ -0.51
PCM1	YEL058W	YGR283C	P53336	341 aa	Predicted RBP	11.86	□□□□□ -0.51
PCM1	YEL058W	PNP1	Q05788	311 aa		11.86	□□□□□ -0.51
PCM1	YEL058W	RCL1	Q08096	367 aa	Predicted RBP	11.86	□□□□□ -0.51
PCM1	YEL058W	GPM2	Q12008	311 aa		11.86	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 397.1 ms