RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 TRL1P09880 827 aaKnown RBP3.55□□□□□ -1.84
snR42snR42 CLN3P13365 580 aa3.55□□□□□ -1.84
snR42snR42 UBC1P21734 215 aaKnown RBP3.55□□□□□ -1.84
snR42snR42 FUB1P25659 250 aa3.55□□□□□ -1.84
snR42snR42 MSS51P32335 436 aa3.55□□□□□ -1.84
snR42snR42 AIM26P32858 118 aa3.55□□□□□ -1.84
snR42snR42 UBP11P36026 717 aa3.55□□□□□ -1.84
snR42snR42 DRE2P36152 348 aa3.55□□□□□ -1.84
snR42snR42 SHU2P38957 223 aa3.55□□□□□ -1.84
snR42snR42 TVP23P38962 199 aa3.55□□□□□ -1.84
snR42snR42 FYV10P40492 516 aa3.55□□□□□ -1.84
snR42snR42 CTF18P49956 741 aa3.55□□□□□ -1.84
snR42snR42 SPT20P50875 604 aa3.55□□□□□ -1.84
snR42snR42 YGL138CP53122 345 aa3.55□□□□□ -1.84
snR42snR42 MFM1Q02783 413 aa3.55□□□□□ -1.84
snR42snR42 WHI4Q07655 649 aaKnown RBP3.55□□□□□ -1.84
snR42snR42 SMC5Q08204 1093 aa3.55□□□□□ -1.84
snR42snR42 SLK19Q08581 821 aaKnown RBP3.55□□□□□ -1.84
snR42snR42 YOR352WQ08816 343 aa3.55□□□□□ -1.84
snR42snR42 TIP41Q12199 356 aa3.55□□□□□ -1.84
snR42snR42 TAO3P40468 2376 aa3.54□□□□□ -1.84
snR42snR42 RPL19AP0CX82 189 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 RPL19BP0CX83 189 aaPredicted RBP3.54□□□□□ -1.84
snR42snR42 FRS2P15625 503 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 VPS1P21576 704 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 KIN82P25341 720 aa3.54□□□□□ -1.84
snR42snR42 MCM5P29496 775 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 EXO5P38289 585 aa3.54□□□□□ -1.84
snR42snR42 YHL017WP38745 532 aa3.54□□□□□ -1.84
snR42snR42 HSE1P38753 452 aa3.54□□□□□ -1.84
snR42snR42 LAM1P38851 1228 aa3.54□□□□□ -1.84
snR42snR42 NMD3P38861 518 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 GAA1P39012 614 aa3.54□□□□□ -1.84
snR42snR42 EAF5P39995 279 aa3.54□□□□□ -1.84
snR42snR42 RPN3P40016 523 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 SLS1P42900 643 aa3.54□□□□□ -1.84
snR42snR42 MSE1P48525 536 aa3.54□□□□□ -1.84
snR42snR42 ALT2P52892 507 aa3.54□□□□□ -1.84
snR42snR42 PIL1P53252 339 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 SDA1P53313 767 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 DIP5P53388 608 aa3.54□□□□□ -1.84
snR42snR42 YNL011CP53980 444 aa3.54□□□□□ -1.84
snR42snR42 GCN5Q03330 439 aa3.54□□□□□ -1.84
snR42snR42 EIS1Q05050 843 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 NOC3Q07896 663 aaPredicted RBP3.54□□□□□ -1.84
snR42snR42 PSK2Q08217 1101 aa3.54□□□□□ -1.84
snR42snR42 HIF1Q12373 385 aa3.54□□□□□ -1.84
snR42snR42 SMC6Q12749 1114 aa3.54□□□□□ -1.84
snR42snR42 FKS1P38631 1876 aaKnown RBP3.54□□□□□ -1.84
snR42snR42 SRD1P09007 221 aa3.53□□□□□ -1.84
snR42snR42 CDC6P09119 513 aa3.53□□□□□ -1.84
snR42snR42 CBP3P21560 335 aa3.53□□□□□ -1.84
snR42snR42 RME1P32338 300 aaKnown RBP3.53□□□□□ -1.84
snR42snR42 RFC5P38251 354 aa3.53□□□□□ -1.84
snR42snR42 NEM1P38757 446 aa3.53□□□□□ -1.84
snR42snR42 STT3P39007 718 aaKnown RBP3.53□□□□□ -1.84
snR42snR42 MEF2P39677 819 aa3.53□□□□□ -1.84
snR42snR42 RVS167P39743 482 aaKnown RBP3.53□□□□□ -1.84
snR42snR42 GPD2P41911 440 aaKnown RBP3.53□□□□□ -1.84
snR42snR42 SAD1P43589 448 aa3.53□□□□□ -1.84
snR42snR42 RET3P53600 189 aa3.53□□□□□ -1.84
snR42snR42 RTC4P53850 401 aa3.53□□□□□ -1.84
snR42snR42 PGA2P53903 129 aa3.53□□□□□ -1.84
snR42snR42 SKY1Q03656 742 aa3.53□□□□□ -1.84
snR42snR42 EMI2Q04409 500 aaKnown RBP3.53□□□□□ -1.84
snR42snR42 BSC2Q05611 235 aa3.53□□□□□ -1.84
snR42snR42 RSA3Q05942 220 aaKnown RBP3.53□□□□□ -1.84
snR42snR42 GET3Q12154 354 aaKnown RBP3.53□□□□□ -1.84
snR42snR42 OSW2Q12202 724 aa3.53□□□□□ -1.84
snR42snR42 DED1P06634 604 aaKnown RBP3.52□□□□□ -1.85
snR42snR42 SPS1P08458 490 aa3.52□□□□□ -1.85
snR42snR42 WHI2P12611 486 aa3.52□□□□□ -1.85
snR42snR42 DBP5P20449 482 aaKnown RBP3.52□□□□□ -1.85
snR42snR42 EFT1P32324 842 aaKnown RBP3.52□□□□□ -1.85
snR42snR42 ASF1P32447 279 aa3.52□□□□□ -1.85
snR42snR42 FMP10P40098 244 aa3.52□□□□□ -1.85
snR42snR42 FIS1P40515 155 aa3.52□□□□□ -1.85
snR42snR42 ULP2P40537 1034 aaPredicted RBP3.52□□□□□ -1.85
snR42snR42 GCV2P49095 1034 aa3.52□□□□□ -1.85
snR42snR42 PEX14P53112 341 aa3.52□□□□□ -1.85
snR42snR42 SLI1P53304 468 aa3.52□□□□□ -1.85
snR42snR42 CBK1P53894 756 aa3.52□□□□□ -1.85
snR42snR42 YNL134CP53912 376 aaKnown RBP3.52□□□□□ -1.85
snR42snR42 NCS2P53923 493 aaPredicted RBP3.52□□□□□ -1.85
snR42snR42 UBP3Q01477 912 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
snR42snR42 MUK1Q02866 612 aa3.52□□□□□ -1.85
snR42snR42 YML122CQ03207 126 aa3.52□□□□□ -1.85
snR42snR42 YLR407WQ06070 228 aa3.52□□□□□ -1.85
snR42snR42 HFI1Q12060 488 aa3.52□□□□□ -1.85
snR42snR42 RIF1P29539 1916 aa3.51□□□□□ -1.85
snR42snR42 PRC1P00729 532 aa3.51□□□□□ -1.85
snR42snR42 MSD1P15179 658 aaKnown RBP3.51□□□□□ -1.85
snR42snR42 DOM34P33309 386 aa3.51□□□□□ -1.85
snR42snR42 BUD2P33314 1104 aa3.51□□□□□ -1.85
snR42snR42 APN2P38207 520 aa3.51□□□□□ -1.85
snR42snR42 POA1P38218 177 aa3.51□□□□□ -1.85
snR42snR42 PIH1P38768 344 aa3.51□□□□□ -1.85
snR42snR42 ESL1P40456 1118 aa3.51□□□□□ -1.85
snR42snR42 QDR1P40475 563 aa3.51□□□□□ -1.85
snR42snR42 HNT2P49775 206 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms