RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeast

Gene RPB8, Length 441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB8	YOR224C	CDC43	P18898	376 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	SEC15	P22224	910 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	ERG6	P25087	383 aa	Known RBP	5.03	□□□□□ -1.6
RPB8	YOR224C	SPC42	P36094	363 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	MAL31	P38156	614 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	BRN1	P38170	754 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	CRP1	P38845	465 aa	Known RBP	5.03	□□□□□ -1.6
RPB8	YOR224C	FMO1	P38866	432 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	MGS1	P40151	587 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	YNL195C	P40168	261 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	STU2	P46675	888 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	GND2	P53319	492 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	TMN2	Q04562	672 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	ECM3	Q99252	613 aa		5.03	□□□□□ -1.6
RPB8	YOR224C	CKB2	P38930	258 aa		5.02	□□□□□ -1.61
RPB8	YOR224C	BAP3	P41815	604 aa		5.02	□□□□□ -1.61
RPB8	YOR224C	PMT3	P47190	753 aa		5.02	□□□□□ -1.61
RPB8	YOR224C	PAN2	P53010	1115 aa	Predicted RBP	5.02	□□□□□ -1.61
RPB8	YOR224C	TEL2	P53038	688 aa		5.02	□□□□□ -1.61
RPB8	YOR224C	BRE5	P53741	515 aa	Known RBP	5.02	□□□□□ -1.61
RPB8	YOR224C	YKL033W-A	Q86ZR7	236 aa		5.02	□□□□□ -1.61
RPB8	YOR224C	HRP1	Q99383	534 aa	Known RBP	5.02	□□□□□ -1.61
RPB8	YOR224C	HIR1	P32479	840 aa		5.01	□□□□□ -1.61
RPB8	YOR224C	SSZ1	P38788	538 aa	Known RBP	5.01	□□□□□ -1.61
RPB8	YOR224C	YJR096W	P47137	282 aa		5.01	□□□□□ -1.61
RPB8	YOR224C	YAP1802	P53309	568 aa		5.01	□□□□□ -1.61
RPB8	YOR224C	YMR210W	Q03649	449 aa		5.01	□□□□□ -1.61
RPB8	YOR224C	ZRT2	Q12436	422 aa		5.01	□□□□□ -1.61
RPB8	YOR224C	KIN3	P22209	435 aa		5	□□□□□ -1.61
RPB8	YOR224C	MTH1	P35198	433 aa		5	□□□□□ -1.61
RPB8	YOR224C	LYS9	P38999	446 aa		5	□□□□□ -1.61
RPB8	YOR224C	SDS3	P40505	327 aa		5	□□□□□ -1.61
RPB8	YOR224C	RET2	P43621	546 aa		5	□□□□□ -1.61
RPB8	YOR224C	YJR039W	P47107	1121 aa		5	□□□□□ -1.61
RPB8	YOR224C	YGR153W	P48238	217 aa		5	□□□□□ -1.61
RPB8	YOR224C	UME1	Q03010	460 aa		5	□□□□□ -1.61
RPB8	YOR224C	VHS3	Q08438	674 aa		5	□□□□□ -1.61
RPB8	YOR224C	DCS2	Q12123	353 aa		5	□□□□□ -1.61
RPB8	YOR224C	AKL1	P38080	1108 aa	Known RBP	4.99	□□□□□ -1.61
RPB8	YOR224C	GET2	P40056	285 aa		4.99	□□□□□ -1.61
RPB8	YOR224C	YNR029C	P53729	429 aa	Known RBP	4.99	□□□□□ -1.61
RPB8	YOR224C	FAP7	Q12055	197 aa	Predicted RBP	4.99	□□□□□ -1.61
RPB8	YOR224C	MRH1	Q12117	320 aa	Predicted RBP	4.99	□□□□□ -1.61
RPB8	YOR224C	RPS9B	P05755	195 aa	Known RBP	4.98	□□□□□ -1.61
RPB8	YOR224C	ERG20	P08524	352 aa	Known RBP	4.98	□□□□□ -1.61
RPB8	YOR224C	PHO11	P35842	467 aa		4.98	□□□□□ -1.61
RPB8	YOR224C	PHO12	P38693	467 aa		4.98	□□□□□ -1.61
RPB8	YOR224C	NUG1	P40010	520 aa	Known RBP	4.98	□□□□□ -1.61
RPB8	YOR224C	RSC8	P43609	557 aa	Known RBP	4.98	□□□□□ -1.61
RPB8	YOR224C	NOP9	P47077	666 aa	Known RBP	4.98	□□□□□ -1.61
RPB8	YOR224C	YGR237C	P50089	785 aa		4.98	□□□□□ -1.61
RPB8	YOR224C	IRC10	Q08118	586 aa		4.98	□□□□□ -1.61
RPB8	YOR224C	PEX1	P24004	1043 aa		4.97	□□□□□ -1.61
RPB8	YOR224C	PIG2	P40187	538 aa		4.97	□□□□□ -1.61
RPB8	YOR224C	CTR1	P49573	406 aa		4.97	□□□□□ -1.61
RPB8	YOR224C	MTQ2	Q03920	221 aa	Predicted RBP	4.97	□□□□□ -1.61
RPB8	YOR224C	HFD1	Q04458	532 aa		4.97	□□□□□ -1.61
RPB8	YOR224C	CLF1	Q12309	687 aa	Predicted RBP	4.97	□□□□□ -1.61
RPB8	YOR224C	IMG2	P25642	146 aa	Predicted RBP	4.96	□□□□□ -1.62
RPB8	YOR224C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RPB8	YOR224C	GID8	P40208	455 aa		4.96	□□□□□ -1.62
RPB8	YOR224C	NDC80	P40460	691 aa		4.96	□□□□□ -1.62
RPB8	YOR224C	VBA4	Q04602	768 aa	Known RBP	4.96	□□□□□ -1.62
RPB8	YOR224C	YLR407W	Q06070	228 aa		4.96	□□□□□ -1.62
RPB8	YOR224C	USV1	Q12132	391 aa		4.96	□□□□□ -1.62
RPB8	YOR224C	GFA1	P14742	717 aa	Known RBP	4.95	□□□□□ -1.62
RPB8	YOR224C	YJL206C	P39529	758 aa		4.95	□□□□□ -1.62
RPB8	YOR224C	HMO1	Q03973	246 aa	Known RBP	4.95	□□□□□ -1.62
RPB8	YOR224C	YHM2	Q04013	314 aa		4.95	□□□□□ -1.62
RPB8	YOR224C	YTM1	Q12024	460 aa	Predicted RBP	4.95	□□□□□ -1.62
RPB8	YOR224C	FRS1	P15624	595 aa	Known RBP	4.94	□□□□□ -1.62
RPB8	YOR224C	DMC1	P25453	334 aa		4.94	□□□□□ -1.62
RPB8	YOR224C	SEC65	P29478	273 aa		4.94	□□□□□ -1.62
RPB8	YOR224C	BCS1	P32839	456 aa		4.94	□□□□□ -1.62
RPB8	YOR224C	GLG1	P36143	616 aa		4.94	□□□□□ -1.62
RPB8	YOR224C	DUN1	P39009	513 aa		4.94	□□□□□ -1.62
RPB8	YOR224C	ARG2	P40360	574 aa		4.94	□□□□□ -1.62
RPB8	YOR224C	SMX3	P54999	86 aa	Predicted RBP	4.94	□□□□□ -1.62
RPB8	YOR224C	RGC1	Q06108	1083 aa	Known RBP	4.94	□□□□□ -1.62
RPB8	YOR224C	VPS36	Q06696	566 aa		4.94	□□□□□ -1.62
RPB8	YOR224C	SIR3	P06701	978 aa		4.93	□□□□□ -1.62
RPB8	YOR224C	ABF1	P14164	731 aa		4.93	□□□□□ -1.62
RPB8	YOR224C	HCA4	P20448	770 aa	Known RBP	4.93	□□□□□ -1.62
RPB8	YOR224C	KIN82	P25341	720 aa		4.93	□□□□□ -1.62
RPB8	YOR224C	PET127	P32606	800 aa		4.93	□□□□□ -1.62
RPB8	YOR224C	TDP1	P38319	544 aa		4.93	□□□□□ -1.62
RPB8	YOR224C	YIL077C	P40508	320 aa		4.93	□□□□□ -1.62
RPB8	YOR224C	GZF3	P42944	551 aa	Known RBP	4.93	□□□□□ -1.62
RPB8	YOR224C	MLH3	Q12083	715 aa		4.93	□□□□□ -1.62
RPB8	YOR224C	POM34	Q12445	299 aa		4.93	□□□□□ -1.62
RPB8	YOR224C	PRP22	P24384	1145 aa	Known RBP	4.92	□□□□□ -1.62
RPB8	YOR224C	YKU70	P32807	602 aa		4.92	□□□□□ -1.62
RPB8	YOR224C	BIT2	P38346	545 aa		4.92	□□□□□ -1.62
RPB8	YOR224C	PXA1	P41909	870 aa		4.92	□□□□□ -1.62
RPB8	YOR224C	ATG4	P53867	494 aa		4.92	□□□□□ -1.62
RPB8	YOR224C	PTA1	Q01329	785 aa	Predicted RBP	4.92	□□□□□ -1.62
RPB8	YOR224C	THI22	Q06490	572 aa		4.92	□□□□□ -1.62
RPB8	YOR224C	CHS5	Q12114	671 aa	Known RBP	4.92	□□□□□ -1.62
RPB8	YOR224C	RPS21B	Q3E754	87 aa	Known RBP	4.92	□□□□□ -1.62
RPB8	YOR224C	PRP28	P23394	588 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms