RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	RPL22A	P05749	121 aa	Known RBP	4.62	□□□□□ -1.67
TRF5	YNL299W	CDC6	P09119	513 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	YER152C	P10356	443 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
TRF5	YNL299W	VPS1	P21576	704 aa	Known RBP	4.62	□□□□□ -1.67
TRF5	YNL299W	AFR1	P33304	620 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	DOM34	P33309	386 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	RPN10	P38886	268 aa	Known RBP	4.62	□□□□□ -1.67
TRF5	YNL299W	SHC1	P39000	512 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	DSS1	P39112	969 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	YAR028W	P39548	234 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	GIP2	P40036	548 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	UME1	Q03010	460 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	VPS72	Q03388	795 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	VAC14	Q06708	880 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	SDH5	Q08230	162 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	PSF3	Q12146	194 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	RUD3	Q12234	484 aa	Known RBP	4.62	□□□□□ -1.67
TRF5	YNL299W	CYB2	P00175	591 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	RAD1	P06777	1100 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	SRP54	P20424	541 aa	Known RBP	4.62	□□□□□ -1.67
TRF5	YNL299W	CBP3	P21560	335 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	VBA3	P25594	458 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	BYE1	P36106	594 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	SPT8	P38915	602 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	MGS1	P40151	587 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	YIR042C	P40586	236 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	YFH7	P43591	353 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	YJR079W	P47126	109 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	CUE3	P53137	624 aa	Known RBP	4.62	□□□□□ -1.67
TRF5	YNL299W	HOT1	Q03213	719 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	YDR338C	Q05497	695 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	INM2	Q05533	292 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	SPP382	Q06411	708 aa	Predicted RBP	4.62	□□□□□ -1.67
TRF5	YNL299W	GAS5	Q08193	484 aa		4.62	□□□□□ -1.67
TRF5	YNL299W	ALG6	Q12001	544 aa	Known RBP	4.62	□□□□□ -1.67
TRF5	YNL299W	RPL11A	P0C0W9	174 aa	Known RBP	4.61	□□□□□ -1.67
TRF5	YNL299W	SNF3	P10870	884 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	RAD53	P22216	821 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	AAR2	P32357	355 aa	Predicted RBP	4.61	□□□□□ -1.67
TRF5	YNL299W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
TRF5	YNL299W	MCX1	P38323	520 aa	Predicted RBP	4.61	□□□□□ -1.67
TRF5	YNL299W	EFM2	P38347	419 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	AKR1	P39010	764 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	EFM4	P40516	257 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	YGR045C	P53229	120 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	SUB1	P54000	292 aa	Known RBP	4.61	□□□□□ -1.67
TRF5	YNL299W	ERG5	P54781	538 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	PRP42	Q03776	544 aa	Known RBP	4.61	□□□□□ -1.67
TRF5	YNL299W	DUS3	Q06053	668 aa	Known RBP	4.61	□□□□□ -1.67
TRF5	YNL299W	HMI1	Q12039	706 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	RPL11B	Q3E757	174 aa	Predicted RBP	4.61	□□□□□ -1.67
TRF5	YNL299W	FLO1	P32768	1537 aa		4.61	□□□□□ -1.67
TRF5	YNL299W	CDC9	P04819	755 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	CDC37	P06101	506 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	MTF2	P10849	440 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	PRP16	P15938	1071 aa	Predicted RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	PAP1	P29468	568 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	RPT3	P33298	428 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	ATG14	P38270	344 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	CTM1	P38818	585 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	ALG2	P43636	503 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	FYV8	P46949	817 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	SDA1	P53313	767 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	RRP6	Q12149	733 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	PUS1	Q12211	544 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	RMP1	Q12530	201 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	FLO11	P08640	1367 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	SPO12	P17123	173 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	NAR1	P23503	491 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	SWI4	P25302	1093 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	PTK1	P36002	662 aa	Predicted RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	QNS1	P38795	714 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	CRG1	P38892	291 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
TRF5	YNL299W	SHQ1	P40486	507 aa	Predicted RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	TED1	P40533	473 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	TY4A-J	P47023	414 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	VPS53	P47061	822 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	JJJ3	P47138	172 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	COG6	P53959	839 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	VTC3	Q02725	835 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	NGL3	Q03210	505 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	GIS4	Q04233	774 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	SPN1	Q06505	410 aa	Predicted RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	NOP6	Q07623	225 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	YOR378W	Q08902	515 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	YPL260W	Q08977	551 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	LAP2	Q10740	671 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	GET3	Q12154	354 aa	Known RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	RRG1	Q12167	365 aa	Predicted RBP	4.6	□□□□□ -1.67
TRF5	YNL299W	TAH18	Q12181	623 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	SEC39	Q12745	709 aa		4.6	□□□□□ -1.67
TRF5	YNL299W	ERS1	P17261	260 aa		4.59	□□□□□ -1.67
TRF5	YNL299W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
TRF5	YNL299W	SPO11	P23179	398 aa		4.59	□□□□□ -1.67
TRF5	YNL299W	RAD57	P25301	460 aa		4.59	□□□□□ -1.67
TRF5	YNL299W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
TRF5	YNL299W	CDC60	P26637	1090 aa	Known RBP	4.59	□□□□□ -1.67
TRF5	YNL299W	KIP1	P28742	1111 aa		4.59	□□□□□ -1.67
TRF5	YNL299W	CDC12	P32468	407 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms