RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C SNM1P40993 198 aa3.45□□□□□ -1.86
SSN8YNL025C ALR2P43553 858 aa3.45□□□□□ -1.86
SSN8YNL025C RET2P43621 546 aa3.45□□□□□ -1.86
SSN8YNL025C VPS30Q02948 557 aa3.45□□□□□ -1.86
SSN8YNL025C YLR287CQ05881 355 aa3.45□□□□□ -1.86
SSN8YNL025C IRC3Q06683 689 aa3.45□□□□□ -1.86
SSN8YNL025C ISA1Q07821 250 aaPredicted RBP3.45□□□□□ -1.86
SSN8YNL025C YTM1Q12024 460 aaPredicted RBP3.45□□□□□ -1.86
SSN8YNL025C YDR056CQ12025 205 aa3.45□□□□□ -1.86
SSN8YNL025C NPC2Q12408 173 aa3.45□□□□□ -1.86
SSN8YNL025C SSM4P40318 1319 aa3.44□□□□□ -1.86
SSN8YNL025C QCR6P00127 147 aa3.44□□□□□ -1.86
SSN8YNL025C STF1P01098 86 aa3.44□□□□□ -1.86
SSN8YNL025C FUR1P18562 216 aaKnown RBP3.44□□□□□ -1.86
SSN8YNL025C YKR078WP36158 585 aaKnown RBP3.44□□□□□ -1.86
SSN8YNL025C KTR4P38131 464 aa3.44□□□□□ -1.86
SSN8YNL025C NPR3P38742 1146 aa3.44□□□□□ -1.86
SSN8YNL025C BCD1P38772 366 aa3.44□□□□□ -1.86
SSN8YNL025C YHR218WP38899 603 aa3.44□□□□□ -1.86
SSN8YNL025C RRP8P38961 392 aaKnown RBP3.44□□□□□ -1.86
SSN8YNL025C GPP2P40106 250 aaKnown RBP3.44□□□□□ -1.86
SSN8YNL025C RAD26P40352 1085 aa3.44□□□□□ -1.86
SSN8YNL025C GPD2P41911 440 aaKnown RBP3.44□□□□□ -1.86
SSN8YNL025C RSC8P43609 557 aaKnown RBP3.44□□□□□ -1.86
SSN8YNL025C PFD1P46988 109 aa3.44□□□□□ -1.86
SSN8YNL025C RTA1P53047 317 aa3.44□□□□□ -1.86
SSN8YNL025C SFB2P53953 876 aa3.44□□□□□ -1.86
SSN8YNL025C VPS9P54787 451 aa3.44□□□□□ -1.86
SSN8YNL025C MTQ2Q03920 221 aaPredicted RBP3.44□□□□□ -1.86
SSN8YNL025C VTI1Q04338 217 aa3.44□□□□□ -1.86
SSN8YNL025C YMR111CQ04461 462 aaPredicted RBP3.44□□□□□ -1.86
SSN8YNL025C YLR225CQ05948 407 aaKnown RBP3.44□□□□□ -1.86
SSN8YNL025C RRP9Q06506 573 aaKnown RBP3.44□□□□□ -1.86
SSN8YNL025C YPL191CQ08930 360 aa3.44□□□□□ -1.86
SSN8YNL025C ENT1Q12518 454 aa3.44□□□□□ -1.86
SSN8YNL025C RNA1P11745 407 aaKnown RBP3.43□□□□□ -1.86
SSN8YNL025C RED1P14291 827 aa3.43□□□□□ -1.86
SSN8YNL025C PGS1P25578 521 aa3.43□□□□□ -1.86
SSN8YNL025C KAR4P25583 335 aa3.43□□□□□ -1.86
SSN8YNL025C EFT1P32324 842 aaKnown RBP3.43□□□□□ -1.86
SSN8YNL025C CDC12P32468 407 aaKnown RBP3.43□□□□□ -1.86
SSN8YNL025C SRP101P32916 621 aa3.43□□□□□ -1.86
SSN8YNL025C BET3P36149 193 aa3.43□□□□□ -1.86
SSN8YNL025C POP2P39008 433 aa3.43□□□□□ -1.86
SSN8YNL025C VPS8P39702 1274 aa3.43□□□□□ -1.86
SSN8YNL025C SAH1P39954 449 aaKnown RBP3.43□□□□□ -1.86
SSN8YNL025C JEM1P40358 645 aa3.43□□□□□ -1.86
SSN8YNL025C YIL166CP40445 542 aa3.43□□□□□ -1.86
SSN8YNL025C GYP7P48365 746 aa3.43□□□□□ -1.86
SSN8YNL025C SLD3P53135 668 aa3.43□□□□□ -1.86
SSN8YNL025C PTA1Q01329 785 aaPredicted RBP3.43□□□□□ -1.86
SSN8YNL025C COG8Q04632 607 aa3.43□□□□□ -1.86
SSN8YNL025C YLR001CQ07895 862 aa3.43□□□□□ -1.86
SSN8YNL025C SDH5Q08230 162 aa3.43□□□□□ -1.86
SSN8YNL025C SGT2Q12118 346 aaKnown RBP3.43□□□□□ -1.86
SSN8YNL025C TAH18Q12181 623 aa3.43□□□□□ -1.86
SSN8YNL025C LAS17Q12446 633 aa3.43□□□□□ -1.86
SSN8YNL025C CEX1Q12453 761 aa3.43□□□□□ -1.86
SSN8YNL025C RMP1Q12530 201 aa3.43□□□□□ -1.86
SSN8YNL025C SMC6Q12749 1114 aa3.43□□□□□ -1.86
SSN8YNL025C TRP4P07285 380 aaPredicted RBP3.42□□□□□ -1.86
SSN8YNL025C TPM1P17536 199 aaKnown RBP3.42□□□□□ -1.86
SSN8YNL025C SUI2P20459 304 aaKnown RBP3.42□□□□□ -1.86
SSN8YNL025C VBA3P25594 458 aa3.42□□□□□ -1.86
SSN8YNL025C CMK1P27466 446 aaKnown RBP3.42□□□□□ -1.86
SSN8YNL025C DBF4P32325 704 aa3.42□□□□□ -1.86
SSN8YNL025C PSY4P38193 441 aa3.42□□□□□ -1.86
SSN8YNL025C RKM3P38222 552 aa3.42□□□□□ -1.86
SSN8YNL025C SRP72P38688 640 aaKnown RBP3.42□□□□□ -1.86
SSN8YNL025C CKB2P38930 258 aa3.42□□□□□ -1.86
SSN8YNL025C KAP123P40069 1113 aaKnown RBP3.42□□□□□ -1.86
SSN8YNL025C DJP1P40564 432 aa3.42□□□□□ -1.86
SSN8YNL025C GZF3P42944 551 aaKnown RBP3.42□□□□□ -1.86
SSN8YNL025C BUL1P48524 976 aa3.42□□□□□ -1.86
SSN8YNL025C MAL11P53048 616 aa3.42□□□□□ -1.86
SSN8YNL025C RBG2P53295 368 aaKnown RBP3.42□□□□□ -1.86
SSN8YNL025C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SSN8YNL025C GRX3Q03835 250 aa3.42□□□□□ -1.86
SSN8YNL025C SFI1Q12369 946 aa3.42□□□□□ -1.86
SSN8YNL025C HSH49Q99181 213 aaPredicted RBP3.42□□□□□ -1.86
SSN8YNL025C CDC48P25694 835 aaKnown RBP3.41□□□□□ -1.86
SSN8YNL025C MSH1P25846 959 aa3.41□□□□□ -1.86
SSN8YNL025C PET309P32522 965 aaPredicted RBP3.41□□□□□ -1.86
SSN8YNL025C PRP19P32523 503 aaKnown RBP3.41□□□□□ -1.86
SSN8YNL025C ABD1P32783 436 aaPredicted RBP3.41□□□□□ -1.86
SSN8YNL025C DID4P36108 232 aa3.41□□□□□ -1.86
SSN8YNL025C YBR238CP38330 731 aaKnown RBP3.41□□□□□ -1.86
SSN8YNL025C PPE1P38796 400 aa3.41□□□□□ -1.86
SSN8YNL025C LRP1P38801 184 aaKnown RBP3.41□□□□□ -1.86
SSN8YNL025C NPP2P39997 493 aa3.41□□□□□ -1.86
SSN8YNL025C NOP16P40007 231 aaKnown RBP3.41□□□□□ -1.86
SSN8YNL025C NIT2P47016 307 aa3.41□□□□□ -1.86
SSN8YNL025C MRPL19P53875 158 aa3.41□□□□□ -1.86
SSN8YNL025C TRS130Q03660 1102 aa3.41□□□□□ -1.86
SSN8YNL025C NSE5Q03718 556 aa3.41□□□□□ -1.86
SSN8YNL025C HEL2Q05580 639 aaKnown RBP3.41□□□□□ -1.86
SSN8YNL025C BLS1Q06071 122 aa3.41□□□□□ -1.86
SSN8YNL025C YCG1Q06680 1035 aa3.41□□□□□ -1.86
SSN8YNL025C YOL073CQ08232 322 aa3.41□□□□□ -1.86
SSN8YNL025C PGC1Q08959 321 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms