RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W SPO14P36126 1683 aa5.73□□□□□ -1.49
UBP9YER098W BIK1P11709 440 aa5.73□□□□□ -1.49
UBP9YER098W TED1P40533 473 aa5.73□□□□□ -1.49
UBP9YER098W YML131WQ03102 365 aa5.73□□□□□ -1.49
UBP9YER098W GYL1Q04322 720 aa5.73□□□□□ -1.49
UBP9YER098W PUS1Q12211 544 aaKnown RBP5.73□□□□□ -1.49
UBP9YER098W CDC25P04821 1589 aa5.73□□□□□ -1.49
UBP9YER098W ENA1P13587 1091 aa5.73□□□□□ -1.49
UBP9YER098W SIS1P25294 352 aaKnown RBP5.73□□□□□ -1.49
UBP9YER098W MSH1P25846 959 aa5.73□□□□□ -1.49
UBP9YER098W UGA2P38067 497 aa5.73□□□□□ -1.49
UBP9YER098W TDA3P38758 523 aa5.73□□□□□ -1.49
UBP9YER098W NMD3P38861 518 aaKnown RBP5.73□□□□□ -1.49
UBP9YER098W CCT5P40413 562 aaKnown RBP5.73□□□□□ -1.49
UBP9YER098W ADE12P80210 433 aaKnown RBP5.73□□□□□ -1.49
UBP9YER098W ENA2Q01896 1091 aa5.73□□□□□ -1.49
UBP9YER098W CTI6Q08923 506 aa5.73□□□□□ -1.49
UBP9YER098W ELG1Q12050 791 aa5.73□□□□□ -1.49
UBP9YER098W ENA5Q12691 1091 aa5.73□□□□□ -1.49
UBP9YER098W COX11P19516 300 aaKnown RBP5.72□□□□□ -1.49
UBP9YER098W MIH1P23748 554 aa5.72□□□□□ -1.49
UBP9YER098W RAD51P25454 400 aa5.72□□□□□ -1.49
UBP9YER098W SWI3P32591 825 aa5.72□□□□□ -1.49
UBP9YER098W CBF5P33322 483 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
UBP9YER098W YAP1801P38856 637 aa5.72□□□□□ -1.49
UBP9YER098W SAP185P40856 1058 aa5.72□□□□□ -1.49
UBP9YER098W RET2P43621 546 aa5.72□□□□□ -1.49
UBP9YER098W UBC9P50623 157 aaPredicted RBP5.72□□□□□ -1.49
UBP9YER098W ESF2P53743 316 aaKnown RBP5.72□□□□□ -1.49
UBP9YER098W HEF3P53978 1044 aaKnown RBP5.72□□□□□ -1.49
UBP9YER098W YLR257WQ06146 321 aaKnown RBP5.72□□□□□ -1.49
UBP9YER098W PSR2Q07949 397 aa5.72□□□□□ -1.49
UBP9YER098W YLL054CQ12244 843 aa5.72□□□□□ -1.49
UBP9YER098W RAD50P12753 1312 aa5.72□□□□□ -1.49
UBP9YER098W PFK1P16861 987 aaKnown RBP5.72□□□□□ -1.49
UBP9YER098W RFC1P38630 861 aaKnown RBP5.72□□□□□ -1.49
UBP9YER098W PDR11P40550 1411 aa5.72□□□□□ -1.49
UBP9YER098W RAV1P47104 1357 aa5.72□□□□□ -1.49
UBP9YER098W GCR2Q01722 534 aa5.72□□□□□ -1.49
UBP9YER098W HOT1Q03213 719 aa5.72□□□□□ -1.49
UBP9YER098W ECM38Q05902 660 aaPredicted RBP5.72□□□□□ -1.49
UBP9YER098W YLR346CQ06139 101 aa5.72□□□□□ -1.49
UBP9YER098W KRE5P22023 1365 aa5.71□□□□□ -1.5
UBP9YER098W PRD1P25375 712 aa5.71□□□□□ -1.5
UBP9YER098W CCR4P31384 837 aaKnown RBP5.71□□□□□ -1.5
UBP9YER098W PUP2P32379 260 aa5.71□□□□□ -1.5
UBP9YER098W RPN10P38886 268 aaKnown RBP5.71□□□□□ -1.5
UBP9YER098W NPP2P39997 493 aa5.71□□□□□ -1.5
UBP9YER098W UBA2P52488 636 aa5.71□□□□□ -1.5
UBP9YER098W MDM1Q01846 1127 aa5.71□□□□□ -1.5
UBP9YER098W SRC1Q03707 834 aa5.71□□□□□ -1.5
UBP9YER098W RTT109Q07794 436 aa5.71□□□□□ -1.5
UBP9YER098W TY1A-BLQ12266 440 aa5.71□□□□□ -1.5
UBP9YER098W RRI2Q12348 645 aa5.71□□□□□ -1.5
UBP9YER098W RPS21AP0C0V8 87 aaKnown RBP5.71□□□□□ -1.5
UBP9YER098W SER1P33330 395 aaKnown RBP5.71□□□□□ -1.5
UBP9YER098W TAF1P46677 1066 aa5.71□□□□□ -1.5
UBP9YER098W ALY2P47029 1046 aa5.71□□□□□ -1.5
UBP9YER098W YJL045WP47052 634 aa5.71□□□□□ -1.5
UBP9YER098W TAD1P53065 400 aa5.71□□□□□ -1.5
UBP9YER098W SLD3P53135 668 aa5.71□□□□□ -1.5
UBP9YER098W YPR027CQ12079 277 aa5.71□□□□□ -1.5
UBP9YER098W MSS18P08593 268 aa5.7□□□□□ -1.5
UBP9YER098W SAC7P17121 654 aa5.7□□□□□ -1.5
UBP9YER098W YER158CP40095 573 aa5.7□□□□□ -1.5
UBP9YER098W GYP7P48365 746 aa5.7□□□□□ -1.5
UBP9YER098W LYS5P50113 272 aa5.7□□□□□ -1.5
UBP9YER098W SKY1Q03656 742 aa5.7□□□□□ -1.5
UBP9YER098W REH1Q06709 432 aa5.7□□□□□ -1.5
UBP9YER098W MDM38Q08179 573 aa5.7□□□□□ -1.5
UBP9YER098W YPL225WQ08971 146 aaKnown RBP5.7□□□□□ -1.5
UBP9YER098W YDR461C-AQ2V2P7 80 aa5.7□□□□□ -1.5
UBP9YER098W NAR1P23503 491 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W PGM2P37012 569 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W SAP1P39955 897 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W EMP65P40085 556 aa5.69□□□□□ -1.5
UBP9YER098W HXT16P47185 567 aa5.69□□□□□ -1.5
UBP9YER098W SCW11P53189 542 aa5.69□□□□□ -1.5
UBP9YER098W PEX15Q08215 383 aa5.69□□□□□ -1.5
UBP9YER098W GFD2P25370 566 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W CDC48P25694 835 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W YKR078WP36158 585 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W GLY1P37303 387 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W HXT6P39003 570 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W HXT7P39004 570 aa5.69□□□□□ -1.5
UBP9YER098W ACA1P39970 489 aa5.69□□□□□ -1.5
UBP9YER098W RPN3P40016 523 aaKnown RBP5.69□□□□□ -1.5
UBP9YER098W QRI7P43122 407 aa5.69□□□□□ -1.5
UBP9YER098W SSP2Q08646 371 aa5.69□□□□□ -1.5
UBP9YER098W SEC39Q12745 709 aa5.69□□□□□ -1.5
UBP9YER098W BI4P03879 638 aa5.68□□□□□ -1.5
UBP9YER098W DAL7P21826 554 aa5.68□□□□□ -1.5
UBP9YER098W HSP104P31539 908 aaKnown RBP5.68□□□□□ -1.5
UBP9YER098W YKU70P32807 602 aa5.68□□□□□ -1.5
UBP9YER098W YHM2Q04013 314 aa5.68□□□□□ -1.5
UBP9YER098W DOT1Q04089 582 aaKnown RBP5.68□□□□□ -1.5
UBP9YER098W GIS4Q04233 774 aa5.68□□□□□ -1.5
UBP9YER098W RPO21P04050 1733 aaKnown RBP5.68□□□□□ -1.5
UBP9YER098W YCL002CP25565 263 aa5.68□□□□□ -1.5
UBP9YER098W HSL7P38274 827 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms