RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Best3Q6H1V1 669 aa24.43■■□□□ 1.5
Lig3-209ENSMUST00000173009 Ptcd1Q8C2E4 695 aaKnown RBP24.43■■□□□ 1.5
Lig3-209ENSMUST00000173009 Nphp3Q7TNH6 1325 aa24.43■■□□□ 1.5
Lig3-209ENSMUST00000173009 Atp6v1aP50516 617 aaKnown RBP24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Cetn4Q8K4K1 168 aa24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Sh3bp5lQ99LH9 392 aa24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Bcar3Q9QZK2 820 aa24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Sytl4Q9R0Q1 673 aa24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Gm4340L7N2C4 268 aa24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Bend4P86174 541 aa24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Zbtb45Q52KG4 520 aa24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Chmp5Q9D7S9 219 aa24.42■■□□□ 1.5
Lig3-209ENSMUST00000173009 Tpx2A2APB8 745 aaKnown RBP24.41■■□□□ 1.5
Lig3-209ENSMUST00000173009 B4galnt3Q6L8S8 986 aa24.41■■□□□ 1.5
Lig3-209ENSMUST00000173009 Asap2Q7SIG6 958 aa24.41■■□□□ 1.5
Lig3-209ENSMUST00000173009 Tbc1d8Q9Z1A9 1134 aa24.41■■□□□ 1.5
Lig3-209ENSMUST00000173009 Ccne2Q9Z238 404 aa24.41■■□□□ 1.5
Lig3-209ENSMUST00000173009 Znfx1Q8R151 1909 aaKnown RBP24.41■■□□□ 1.5
Lig3-209ENSMUST00000173009 Sept1P42209 366 aa24.4■■□□□ 1.5
Lig3-209ENSMUST00000173009 ParvgQ9ERD8 331 aa24.4■■□□□ 1.5
Lig3-209ENSMUST00000173009 Cfap44E9Q5M6 1843 aa24.4■■□□□ 1.5
Lig3-209ENSMUST00000173009 TsksO54887 585 aa24.39■■□□□ 1.5
Lig3-209ENSMUST00000173009 Sptlc3Q8BG54 563 aa24.39■■□□□ 1.5
Lig3-209ENSMUST00000173009 Spire2Q8K1S6 718 aa24.39■■□□□ 1.5
Lig3-209ENSMUST00000173009 Slc51aQ8R000 340 aa24.39■■□□□ 1.5
Lig3-209ENSMUST00000173009 Myoz2Q9JJW5 264 aa24.39■■□□□ 1.5
Lig3-209ENSMUST00000173009 Pnmal2G3X9N3 661 aa24.39■■□□□ 1.49
Lig3-209ENSMUST00000173009 Kiaa0753Q6A000 959 aa24.39■■□□□ 1.49
Lig3-209ENSMUST00000173009 Gpr101Q80T62 511 aa24.39■■□□□ 1.49
Lig3-209ENSMUST00000173009 Ufl1Q8CCJ3 793 aaKnown RBP24.39■■□□□ 1.49
Lig3-209ENSMUST00000173009 Supt16hQ920B9 1047 aa24.39■■□□□ 1.49
Lig3-209ENSMUST00000173009 Fam84aQ9D650 292 aa24.39■■□□□ 1.49
Lig3-209ENSMUST00000173009 Ift57Q8BXG3 429 aa24.38■■□□□ 1.49
Lig3-209ENSMUST00000173009 FktnQ8R507 461 aa24.38■■□□□ 1.49
Lig3-209ENSMUST00000173009 Slc4a1P04919 929 aa24.37■■□□□ 1.49
Lig3-209ENSMUST00000173009 Mcm2P97310 904 aa24.37■■□□□ 1.49
Lig3-209ENSMUST00000173009 Fam228bQ497Q6 232 aa24.37■■□□□ 1.49
Lig3-209ENSMUST00000173009 Rbm33Q9CXK9 1231 aaKnown RBP24.37■■□□□ 1.49
Lig3-209ENSMUST00000173009 Kcnq5Q9JK45 933 aa24.37■■□□□ 1.49
Lig3-209ENSMUST00000173009 Rhbdl3P58873 404 aa24.37■■□□□ 1.49
Lig3-209ENSMUST00000173009 Mctp2Q5RJH2 878 aa24.37■■□□□ 1.49
Lig3-209ENSMUST00000173009 Ppp4r2Q0VGB7 417 aa24.36■■□□□ 1.49
Lig3-209ENSMUST00000173009 Ptpdc1Q6NZK8 747 aa24.35■■□□□ 1.49
Lig3-209ENSMUST00000173009 Unc5clQ6R653 518 aa24.35■■□□□ 1.49
Lig3-209ENSMUST00000173009 Wdr43Q6ZQL4 677 aaKnown RBP24.35■■□□□ 1.49
Lig3-209ENSMUST00000173009 Tmem266Q8BZB3 538 aa24.35■■□□□ 1.49
Lig3-209ENSMUST00000173009 Kif18aQ91WD7 886 aa24.34■■□□□ 1.49
Lig3-209ENSMUST00000173009 Ccdc51Q3URS9 406 aa24.34■■□□□ 1.49
Lig3-209ENSMUST00000173009 Taf5lQ91WQ5 589 aa24.34■■□□□ 1.49
Lig3-209ENSMUST00000173009 Mrpl12Q9DB15 201 aaKnown RBP24.34■■□□□ 1.49
Lig3-209ENSMUST00000173009 Irs4Q9Z0Y7 1216 aa24.34■■□□□ 1.49
Lig3-209ENSMUST00000173009 Nup98Q6PFD9 1816 aaKnown RBP24.33■■□□□ 1.49
Lig3-209ENSMUST00000173009 Scn11aQ9R053 1765 aa24.33■■□□□ 1.49
Lig3-209ENSMUST00000173009 SnrkQ8VDU5 748 aa24.33■■□□□ 1.49
Lig3-209ENSMUST00000173009 Fchsd1Q6PFY1 688 aa24.32■■□□□ 1.48
Lig3-209ENSMUST00000173009 Skor1Q8BX46 964 aa24.32■■□□□ 1.48
Lig3-209ENSMUST00000173009 Btaf1E9QAE3 1848 aa24.32■■□□□ 1.48
Lig3-209ENSMUST00000173009 Flt1P35969 1333 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 D830030K20RikE9PYQ5 218 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Gm3043K7N693 218 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Gm16440K7N6G6 218 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Gm2244L7N2A3 218 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Gm3278L7N2D2 218 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Gm8271L7N2E2 218 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Hmox1P14901 289 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Cypt1Q8CH20 168 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Pde3aQ9Z0X4 1141 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Ltn1Q6A009 1767 aa24.31■■□□□ 1.48
Lig3-209ENSMUST00000173009 Tbc1d4Q8BYJ6 1307 aa24.3■■□□□ 1.48
Lig3-209ENSMUST00000173009 Wdr63B2RY71 923 aa24.3■■□□□ 1.48
Lig3-209ENSMUST00000173009 Cyp2c68K7N6C2 491 aa24.3■■□□□ 1.48
Lig3-209ENSMUST00000173009 Vps54Q5SPW0 977 aa24.3■■□□□ 1.48
Lig3-209ENSMUST00000173009 Nlrp9aQ66X03 949 aa24.3■■□□□ 1.48
Lig3-209ENSMUST00000173009 Setdb1O88974 1307 aa24.3■■□□□ 1.48
Lig3-209ENSMUST00000173009 Ankrd63A2ARS0 390 aa24.29■■□□□ 1.48
Lig3-209ENSMUST00000173009 Znf692Q3U381 531 aa24.29■■□□□ 1.48
Lig3-209ENSMUST00000173009 Nol8Q3UHX0 1147 aaKnown RBP24.29■■□□□ 1.48
Lig3-209ENSMUST00000173009 Krt25Q8VCW2 446 aa24.29■■□□□ 1.48
Lig3-209ENSMUST00000173009 EspnQ9ET47 871 aa24.29■■□□□ 1.48
Lig3-209ENSMUST00000173009 Dpf2Q61103 391 aaKnown RBP24.29■■□□□ 1.48
Lig3-209ENSMUST00000173009 Sept9Q80UG5 583 aa24.29■■□□□ 1.48
Lig3-209ENSMUST00000173009 Plekhg6Q8R0J1 787 aa24.29■■□□□ 1.48
Lig3-209ENSMUST00000173009 Golgb1E9PVZ8 3238 aa24.28■■□□□ 1.48
Lig3-209ENSMUST00000173009 Hoxa7P02830 229 aa24.28■■□□□ 1.48
Lig3-209ENSMUST00000173009 Csrnp1P59054 583 aa24.28■■□□□ 1.48
Lig3-209ENSMUST00000173009 Erc2Q6PH08 957 aa24.28■■□□□ 1.48
Lig3-209ENSMUST00000173009 Phrf1A6H619 1682 aa24.28■■□□□ 1.48
Lig3-209ENSMUST00000173009 Vsig10D3YX43 558 aa24.27■■□□□ 1.48
Lig3-209ENSMUST00000173009 Znf428Q8C1M2 176 aa24.27■■□□□ 1.48
Lig3-209ENSMUST00000173009 Carmil3Q3UFQ8 1375 aa24.27■■□□□ 1.48
Lig3-209ENSMUST00000173009 Abtb2Q7TQI7 1024 aa24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 Riok1Q922Q2 567 aa24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 Zkscan2G3X952 960 aa24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 Map7O88735 730 aa24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 Prl3d1P18121 224 aa24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 Ltv1Q6NSQ7 470 aaKnown RBP24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 Fam160b2Q80YR2 744 aa24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 Cog6Q8R3I3 657 aa24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 Il1rapl2Q9ERS6 686 aa24.26■■□□□ 1.47
Lig3-209ENSMUST00000173009 TnksQ6PFX9 1320 aa24.25■■□□□ 1.47
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms