Protein–RNA interactions for Protein: A6H619

Phrf1, PHD and RING finger domain-containing protein 1, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phrf1A6H619 Gm25239-201ENSMUST00000174915 86 ntBASIC47.32■■■■■ 5.17
Phrf1A6H619 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.97■■■■■ 4.63
Phrf1A6H619 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.95■■■■■ 4.47
Phrf1A6H619 Gm15042-201ENSMUST00000120212 883 ntBASIC41.4■■■■■ 4.22
Phrf1A6H619 Gm24109-201ENSMUST00000175489 103 ntBASIC41.24■■■■■ 4.19
Phrf1A6H619 Gm15045-201ENSMUST00000117359 883 ntBASIC40.69■■■■■ 4.1
Phrf1A6H619 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Phrf1A6H619 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Phrf1A6H619 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.01■■■■■ 4
Phrf1A6H619 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
Phrf1A6H619 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Phrf1A6H619 Gm23366-201ENSMUST00000175022 89 ntBASIC39.45■■■■□ 3.91
Phrf1A6H619 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
Phrf1A6H619 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.93■■■■□ 3.82
Phrf1A6H619 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Phrf1A6H619 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.32■■■■□ 3.72
Phrf1A6H619 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
Phrf1A6H619 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.11■■■■□ 3.69
Phrf1A6H619 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38.04■■■■□ 3.68
Phrf1A6H619 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.01■■■■□ 3.67
Phrf1A6H619 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.91■■■■□ 3.66
Phrf1A6H619 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.83■■■■□ 3.65
Phrf1A6H619 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Phrf1A6H619 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Phrf1A6H619 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.56■■■■□ 3.6
Phrf1A6H619 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Phrf1A6H619 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
Phrf1A6H619 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.51■■■■□ 3.6
Phrf1A6H619 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
Phrf1A6H619 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.51■■■■□ 3.6
Phrf1A6H619 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Phrf1A6H619 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.33■■■■□ 3.57
Phrf1A6H619 Gm25238-201ENSMUST00000174914 89 ntBASIC37.33■■■■□ 3.57
Phrf1A6H619 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Phrf1A6H619 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.11■■■■□ 3.53
Phrf1A6H619 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.03■■■■□ 3.52
Phrf1A6H619 Psd-208ENSMUST00000224556 2034 ntBASIC36.96■■■■□ 3.51
Phrf1A6H619 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.74■■■■□ 3.47
Phrf1A6H619 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.68■■■■□ 3.46
Phrf1A6H619 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
Phrf1A6H619 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.41■■■■□ 3.42
Phrf1A6H619 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.39
Phrf1A6H619 Gm27325-201ENSMUST00000175467 74 ntBASIC36.23■■■■□ 3.39
Phrf1A6H619 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.17■■■■□ 3.38
Phrf1A6H619 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.15■■■■□ 3.38
Phrf1A6H619 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Phrf1A6H619 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.11■■■■□ 3.37
Phrf1A6H619 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.07■■■■□ 3.36
Phrf1A6H619 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Phrf1A6H619 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.86■■■■□ 3.33
Phrf1A6H619 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Phrf1A6H619 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.77■■■■□ 3.32
Phrf1A6H619 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Phrf1A6H619 Gm25262-201ENSMUST00000174934 133 ntBASIC35.66■■■■□ 3.3
Phrf1A6H619 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.63■■■■□ 3.29
Phrf1A6H619 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Phrf1A6H619 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.59■■■■□ 3.29
Phrf1A6H619 Rab21-202ENSMUST00000218831 843 ntBASIC35.56■■■■□ 3.28
Phrf1A6H619 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Phrf1A6H619 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Phrf1A6H619 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Phrf1A6H619 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.37■■■■□ 3.25
Phrf1A6H619 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Phrf1A6H619 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.28■■■■□ 3.24
Phrf1A6H619 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.26■■■■□ 3.23
Phrf1A6H619 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.26■■■■□ 3.23
Phrf1A6H619 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Phrf1A6H619 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.22■■■■□ 3.23
Phrf1A6H619 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.2■■■■□ 3.23
Phrf1A6H619 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
Phrf1A6H619 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
Phrf1A6H619 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
Phrf1A6H619 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Phrf1A6H619 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Phrf1A6H619 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Phrf1A6H619 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Phrf1A6H619 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Phrf1A6H619 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Phrf1A6H619 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
Phrf1A6H619 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
Phrf1A6H619 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Phrf1A6H619 Gm26115-201ENSMUST00000175605 87 ntBASIC34.86■■■■□ 3.17
Phrf1A6H619 Gm8109-201ENSMUST00000194076 746 ntBASIC34.85■■■■□ 3.17
Phrf1A6H619 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Phrf1A6H619 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Phrf1A6H619 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.74■■■■□ 3.15
Phrf1A6H619 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.73■■■■□ 3.15
Phrf1A6H619 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Phrf1A6H619 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.7■■■■□ 3.14
Phrf1A6H619 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
Phrf1A6H619 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.58■■■■□ 3.13
Phrf1A6H619 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Phrf1A6H619 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Phrf1A6H619 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Phrf1A6H619 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.57■■■■□ 3.12
Phrf1A6H619 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Phrf1A6H619 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.55■■■■□ 3.12
Phrf1A6H619 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.54■■■■□ 3.12
Phrf1A6H619 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Phrf1A6H619 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.44■■■■□ 3.1
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms