Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Gm25239-201ENSMUST00000174915 86 ntBASIC47.98■■■■■ 5.27
Atp6v1aP50516 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC44.54■■■■■ 4.72
Atp6v1aP50516 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43.87■■■■■ 4.61
Atp6v1aP50516 Gm24109-201ENSMUST00000175489 103 ntBASIC41.73■■■■■ 4.27
Atp6v1aP50516 Gm15042-201ENSMUST00000120212 883 ntBASIC41.58■■■■■ 4.25
Atp6v1aP50516 Gm15045-201ENSMUST00000117359 883 ntBASIC40.6■■■■■ 4.09
Atp6v1aP50516 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.52■■■■■ 4.08
Atp6v1aP50516 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
Atp6v1aP50516 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
Atp6v1aP50516 Gm23366-201ENSMUST00000175022 89 ntBASIC40.02■■■■■ 4
Atp6v1aP50516 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
Atp6v1aP50516 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
Atp6v1aP50516 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39.08■■■■□ 3.85
Atp6v1aP50516 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Atp6v1aP50516 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Atp6v1aP50516 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38.72■■■■□ 3.79
Atp6v1aP50516 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC38.68■■■■□ 3.78
Atp6v1aP50516 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
Atp6v1aP50516 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.48■■■■□ 3.75
Atp6v1aP50516 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Atp6v1aP50516 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Atp6v1aP50516 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.11■■■■□ 3.69
Atp6v1aP50516 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Atp6v1aP50516 Gm25238-201ENSMUST00000174914 89 ntBASIC37.99■■■■□ 3.67
Atp6v1aP50516 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.98■■■■□ 3.67
Atp6v1aP50516 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.96■■■■□ 3.67
Atp6v1aP50516 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Atp6v1aP50516 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.7■■■■□ 3.63
Atp6v1aP50516 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Atp6v1aP50516 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Atp6v1aP50516 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.34■■■■□ 3.57
Atp6v1aP50516 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.29■■■■□ 3.56
Atp6v1aP50516 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37.18■■■■□ 3.54
Atp6v1aP50516 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Atp6v1aP50516 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.99■■■■□ 3.51
Atp6v1aP50516 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.82■■■■□ 3.48
Atp6v1aP50516 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.81■■■■□ 3.48
Atp6v1aP50516 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Atp6v1aP50516 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Atp6v1aP50516 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.7■■■■□ 3.47
Atp6v1aP50516 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.58■■■■□ 3.45
Atp6v1aP50516 Gm25262-201ENSMUST00000174934 133 ntBASIC36.55■■■■□ 3.44
Atp6v1aP50516 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.44■■■■□ 3.42
Atp6v1aP50516 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.42■■■■□ 3.42
Atp6v1aP50516 Gm27325-201ENSMUST00000175467 74 ntBASIC36.38■■■■□ 3.41
Atp6v1aP50516 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.18■■■■□ 3.38
Atp6v1aP50516 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Atp6v1aP50516 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Atp6v1aP50516 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.97■■■■□ 3.35
Atp6v1aP50516 Psd-208ENSMUST00000224556 2034 ntBASIC35.96■■■■□ 3.35
Atp6v1aP50516 Rab21-202ENSMUST00000218831 843 ntBASIC35.94■■■■□ 3.34
Atp6v1aP50516 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.91■■■■□ 3.34
Atp6v1aP50516 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.89■■■■□ 3.34
Atp6v1aP50516 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.83■■■■□ 3.33
Atp6v1aP50516 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Atp6v1aP50516 Gm26115-201ENSMUST00000175605 87 ntBASIC35.78■■■■□ 3.32
Atp6v1aP50516 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.76■■■■□ 3.32
Atp6v1aP50516 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
Atp6v1aP50516 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.66■■■■□ 3.3
Atp6v1aP50516 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35.59■■■■□ 3.29
Atp6v1aP50516 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
Atp6v1aP50516 Gm8109-201ENSMUST00000194076 746 ntBASIC35.55■■■■□ 3.28
Atp6v1aP50516 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
Atp6v1aP50516 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Atp6v1aP50516 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.51■■■■□ 3.28
Atp6v1aP50516 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.49■■■■□ 3.27
Atp6v1aP50516 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.48■■■■□ 3.27
Atp6v1aP50516 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.32■■■■□ 3.24
Atp6v1aP50516 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Atp6v1aP50516 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Atp6v1aP50516 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Atp6v1aP50516 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.2■■■■□ 3.23
Atp6v1aP50516 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
Atp6v1aP50516 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.19■■■■□ 3.22
Atp6v1aP50516 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.17■■■■□ 3.22
Atp6v1aP50516 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.12■■■■□ 3.21
Atp6v1aP50516 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.09■■■■□ 3.21
Atp6v1aP50516 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Atp6v1aP50516 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
Atp6v1aP50516 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Atp6v1aP50516 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Atp6v1aP50516 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Atp6v1aP50516 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Atp6v1aP50516 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
Atp6v1aP50516 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.74■■■■□ 3.15
Atp6v1aP50516 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Atp6v1aP50516 Gm17082-201ENSMUST00000166043 1091 ntBASIC34.71■■■■□ 3.15
Atp6v1aP50516 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
Atp6v1aP50516 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Atp6v1aP50516 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.66■■■■□ 3.14
Atp6v1aP50516 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC34.58■■■■□ 3.13
Atp6v1aP50516 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.57■■■■□ 3.13
Atp6v1aP50516 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.57■■■■□ 3.12
Atp6v1aP50516 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Atp6v1aP50516 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Atp6v1aP50516 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
Atp6v1aP50516 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Atp6v1aP50516 Gm27322-201ENSMUST00000184007 104 ntBASIC34.43■■■■□ 3.1
Atp6v1aP50516 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Atp6v1aP50516 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms