Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Gm25239-201ENSMUST00000174915 86 ntBASIC46.54■■■■■ 5.04
Sptlc3Q8BG54 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.99■■■■■ 4.47
Sptlc3Q8BG54 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.34■■■■■ 4.37
Sptlc3Q8BG54 Gm15042-201ENSMUST00000120212 883 ntBASIC40.74■■■■■ 4.11
Sptlc3Q8BG54 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.09
Sptlc3Q8BG54 Gm24109-201ENSMUST00000175489 103 ntBASIC40.33■■■■■ 4.05
Sptlc3Q8BG54 Gm15045-201ENSMUST00000117359 883 ntBASIC39.93■■■■□ 3.98
Sptlc3Q8BG54 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Sptlc3Q8BG54 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Sptlc3Q8BG54 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.28■■■■□ 3.88
Sptlc3Q8BG54 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.27■■■■□ 3.88
Sptlc3Q8BG54 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
Sptlc3Q8BG54 Gm23366-201ENSMUST00000175022 89 ntBASIC38.82■■■■□ 3.8
Sptlc3Q8BG54 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
Sptlc3Q8BG54 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
Sptlc3Q8BG54 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Sptlc3Q8BG54 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38■■■■□ 3.67
Sptlc3Q8BG54 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.79■■■■□ 3.64
Sptlc3Q8BG54 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Sptlc3Q8BG54 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.58■■■■□ 3.61
Sptlc3Q8BG54 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.53■■■■□ 3.6
Sptlc3Q8BG54 Psd-208ENSMUST00000224556 2034 ntBASIC37.46■■■■□ 3.59
Sptlc3Q8BG54 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.45■■■■□ 3.59
Sptlc3Q8BG54 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Sptlc3Q8BG54 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.39■■■■□ 3.58
Sptlc3Q8BG54 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.37■■■■□ 3.57
Sptlc3Q8BG54 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.34■■■■□ 3.57
Sptlc3Q8BG54 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
Sptlc3Q8BG54 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.17■■■■□ 3.54
Sptlc3Q8BG54 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.05■■■■□ 3.52
Sptlc3Q8BG54 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
Sptlc3Q8BG54 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
Sptlc3Q8BG54 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Sptlc3Q8BG54 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Sptlc3Q8BG54 Gm25238-201ENSMUST00000174914 89 ntBASIC36.74■■■■□ 3.47
Sptlc3Q8BG54 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.58■■■■□ 3.45
Sptlc3Q8BG54 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.5■■■■□ 3.43
Sptlc3Q8BG54 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Sptlc3Q8BG54 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Sptlc3Q8BG54 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Sptlc3Q8BG54 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
Sptlc3Q8BG54 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Sptlc3Q8BG54 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Sptlc3Q8BG54 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.93■■■■□ 3.34
Sptlc3Q8BG54 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.85■■■■□ 3.33
Sptlc3Q8BG54 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Sptlc3Q8BG54 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.8■■■■□ 3.32
Sptlc3Q8BG54 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.78■■■■□ 3.32
Sptlc3Q8BG54 Gm27325-201ENSMUST00000175467 74 ntBASIC35.74■■■■□ 3.31
Sptlc3Q8BG54 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
Sptlc3Q8BG54 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.63■■■■□ 3.29
Sptlc3Q8BG54 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Sptlc3Q8BG54 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.53■■■■□ 3.28
Sptlc3Q8BG54 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.26
Sptlc3Q8BG54 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Sptlc3Q8BG54 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.37■■■■□ 3.25
Sptlc3Q8BG54 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Sptlc3Q8BG54 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.3■■■■□ 3.24
Sptlc3Q8BG54 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Sptlc3Q8BG54 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Sptlc3Q8BG54 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.09■■■■□ 3.21
Sptlc3Q8BG54 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Sptlc3Q8BG54 Gm25262-201ENSMUST00000174934 133 ntBASIC35.03■■■■□ 3.2
Sptlc3Q8BG54 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Sptlc3Q8BG54 Rab21-202ENSMUST00000218831 843 ntBASIC34.99■■■■□ 3.19
Sptlc3Q8BG54 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Sptlc3Q8BG54 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Sptlc3Q8BG54 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.91■■■■□ 3.18
Sptlc3Q8BG54 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.89■■■■□ 3.18
Sptlc3Q8BG54 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.86■■■■□ 3.17
Sptlc3Q8BG54 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Sptlc3Q8BG54 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
Sptlc3Q8BG54 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Sptlc3Q8BG54 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Sptlc3Q8BG54 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Sptlc3Q8BG54 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.77■■■■□ 3.16
Sptlc3Q8BG54 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.73■■■■□ 3.15
Sptlc3Q8BG54 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Sptlc3Q8BG54 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Sptlc3Q8BG54 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
Sptlc3Q8BG54 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Sptlc3Q8BG54 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.64■■■■□ 3.14
Sptlc3Q8BG54 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.55■■■■□ 3.12
Sptlc3Q8BG54 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.55■■■■□ 3.12
Sptlc3Q8BG54 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Sptlc3Q8BG54 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Sptlc3Q8BG54 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
Sptlc3Q8BG54 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.45■■■■□ 3.11
Sptlc3Q8BG54 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
Sptlc3Q8BG54 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.38■■■■□ 3.09
Sptlc3Q8BG54 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Sptlc3Q8BG54 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.32■■■■□ 3.08
Sptlc3Q8BG54 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.32■■■■□ 3.08
Sptlc3Q8BG54 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Sptlc3Q8BG54 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Sptlc3Q8BG54 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.18■■■■□ 3.06
Sptlc3Q8BG54 Gm26115-201ENSMUST00000175605 87 ntBASIC34.1■■■■□ 3.05
Sptlc3Q8BG54 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Sptlc3Q8BG54 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.06■■■■□ 3.04
Sptlc3Q8BG54 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.01■■■■□ 3.03
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms