Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Gm25239-201ENSMUST00000174915 86 ntBASIC47.53■■■■■ 5.2
Carmil3Q3UFQ8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC44.07■■■■■ 4.65
Carmil3Q3UFQ8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43.39■■■■■ 4.54
Carmil3Q3UFQ8 Gm15042-201ENSMUST00000120212 883 ntBASIC41.37■■■■■ 4.21
Carmil3Q3UFQ8 Gm24109-201ENSMUST00000175489 103 ntBASIC41.31■■■■■ 4.2
Carmil3Q3UFQ8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
Carmil3Q3UFQ8 Gm15045-201ENSMUST00000117359 883 ntBASIC40.44■■■■■ 4.06
Carmil3Q3UFQ8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Carmil3Q3UFQ8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.15■■■■■ 4.02
Carmil3Q3UFQ8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
Carmil3Q3UFQ8 Gm23366-201ENSMUST00000175022 89 ntBASIC39.69■■■■□ 3.94
Carmil3Q3UFQ8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
Carmil3Q3UFQ8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Carmil3Q3UFQ8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.09■■■■□ 3.85
Carmil3Q3UFQ8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.76
Carmil3Q3UFQ8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.56■■■■□ 3.76
Carmil3Q3UFQ8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38.26■■■■□ 3.72
Carmil3Q3UFQ8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC38.19■■■■□ 3.7
Carmil3Q3UFQ8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.19■■■■□ 3.7
Carmil3Q3UFQ8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
Carmil3Q3UFQ8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
Carmil3Q3UFQ8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
Carmil3Q3UFQ8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Carmil3Q3UFQ8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
Carmil3Q3UFQ8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Carmil3Q3UFQ8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.67■■■■□ 3.62
Carmil3Q3UFQ8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.6■■■■□ 3.61
Carmil3Q3UFQ8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Carmil3Q3UFQ8 Gm25238-201ENSMUST00000174914 89 ntBASIC37.56■■■■□ 3.6
Carmil3Q3UFQ8 Psd-208ENSMUST00000224556 2034 ntBASIC37.49■■■■□ 3.59
Carmil3Q3UFQ8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Carmil3Q3UFQ8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.24■■■■□ 3.55
Carmil3Q3UFQ8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
Carmil3Q3UFQ8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.02■■■■□ 3.52
Carmil3Q3UFQ8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Carmil3Q3UFQ8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.01■■■■□ 3.51
Carmil3Q3UFQ8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.91■■■■□ 3.5
Carmil3Q3UFQ8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
Carmil3Q3UFQ8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.54■■■■□ 3.44
Carmil3Q3UFQ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.47■■■■□ 3.43
Carmil3Q3UFQ8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.47■■■■□ 3.43
Carmil3Q3UFQ8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Carmil3Q3UFQ8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.41■■■■□ 3.42
Carmil3Q3UFQ8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Carmil3Q3UFQ8 Gm27325-201ENSMUST00000175467 74 ntBASIC36.2■■■■□ 3.39
Carmil3Q3UFQ8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.2■■■■□ 3.39
Carmil3Q3UFQ8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Carmil3Q3UFQ8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.1■■■■□ 3.37
Carmil3Q3UFQ8 Gm25262-201ENSMUST00000174934 133 ntBASIC36.09■■■■□ 3.37
Carmil3Q3UFQ8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Carmil3Q3UFQ8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Carmil3Q3UFQ8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Carmil3Q3UFQ8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
Carmil3Q3UFQ8 Rab21-202ENSMUST00000218831 843 ntBASIC35.7■■■■□ 3.31
Carmil3Q3UFQ8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.62■■■■□ 3.29
Carmil3Q3UFQ8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.6■■■■□ 3.29
Carmil3Q3UFQ8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Carmil3Q3UFQ8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.57■■■■□ 3.28
Carmil3Q3UFQ8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.5■■■■□ 3.27
Carmil3Q3UFQ8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.47■■■■□ 3.27
Carmil3Q3UFQ8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Carmil3Q3UFQ8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.4■■■■□ 3.26
Carmil3Q3UFQ8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Carmil3Q3UFQ8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Carmil3Q3UFQ8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
Carmil3Q3UFQ8 Gm26115-201ENSMUST00000175605 87 ntBASIC35.28■■■■□ 3.24
Carmil3Q3UFQ8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Carmil3Q3UFQ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Carmil3Q3UFQ8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.25■■■■□ 3.23
Carmil3Q3UFQ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.2■■■■□ 3.23
Carmil3Q3UFQ8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Carmil3Q3UFQ8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
Carmil3Q3UFQ8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Carmil3Q3UFQ8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Carmil3Q3UFQ8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Carmil3Q3UFQ8 Gm8109-201ENSMUST00000194076 746 ntBASIC35.07■■■■□ 3.2
Carmil3Q3UFQ8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.05■■■■□ 3.2
Carmil3Q3UFQ8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Carmil3Q3UFQ8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35■■■■□ 3.19
Carmil3Q3UFQ8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.97■■■■□ 3.19
Carmil3Q3UFQ8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
Carmil3Q3UFQ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Carmil3Q3UFQ8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Carmil3Q3UFQ8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.86■■■■□ 3.17
Carmil3Q3UFQ8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Carmil3Q3UFQ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
Carmil3Q3UFQ8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Carmil3Q3UFQ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
Carmil3Q3UFQ8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
Carmil3Q3UFQ8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
Carmil3Q3UFQ8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Carmil3Q3UFQ8 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.63■■■■□ 3.13
Carmil3Q3UFQ8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Carmil3Q3UFQ8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.62■■■■□ 3.13
Carmil3Q3UFQ8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Carmil3Q3UFQ8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Carmil3Q3UFQ8 Gm17082-201ENSMUST00000166043 1091 ntBASIC34.48■■■■□ 3.11
Carmil3Q3UFQ8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.47■■■■□ 3.11
Carmil3Q3UFQ8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.47■■■■□ 3.11
Carmil3Q3UFQ8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms