Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Gm25239-201ENSMUST00000174915 86 ntBASIC48■■■■■ 5.28
Ltn1Q6A009 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC44.71■■■■■ 4.75
Ltn1Q6A009 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43.67■■■■■ 4.58
Ltn1Q6A009 Gm24109-201ENSMUST00000175489 103 ntBASIC41.92■■■■■ 4.3
Ltn1Q6A009 Gm15042-201ENSMUST00000120212 883 ntBASIC41.68■■■■■ 4.26
Ltn1Q6A009 Gm15045-201ENSMUST00000117359 883 ntBASIC40.95■■■■■ 4.15
Ltn1Q6A009 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.61■■■■■ 4.09
Ltn1Q6A009 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
Ltn1Q6A009 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
Ltn1Q6A009 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Ltn1Q6A009 Gm23366-201ENSMUST00000175022 89 ntBASIC39.97■■■■□ 3.99
Ltn1Q6A009 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Ltn1Q6A009 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
Ltn1Q6A009 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39.11■■■■□ 3.85
Ltn1Q6A009 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38.72■■■■□ 3.79
Ltn1Q6A009 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
Ltn1Q6A009 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC38.58■■■■□ 3.77
Ltn1Q6A009 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.56■■■■□ 3.76
Ltn1Q6A009 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Ltn1Q6A009 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.27■■■■□ 3.72
Ltn1Q6A009 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
Ltn1Q6A009 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Ltn1Q6A009 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
Ltn1Q6A009 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.98■■■■□ 3.67
Ltn1Q6A009 Gm25238-201ENSMUST00000174914 89 ntBASIC37.97■■■■□ 3.67
Ltn1Q6A009 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.96■■■■□ 3.67
Ltn1Q6A009 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Ltn1Q6A009 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.81■■■■□ 3.64
Ltn1Q6A009 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Ltn1Q6A009 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.5■■■■□ 3.59
Ltn1Q6A009 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.58
Ltn1Q6A009 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.35■■■■□ 3.57
Ltn1Q6A009 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37.24■■■■□ 3.55
Ltn1Q6A009 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.21■■■■□ 3.55
Ltn1Q6A009 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
Ltn1Q6A009 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Ltn1Q6A009 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.87■■■■□ 3.49
Ltn1Q6A009 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.83■■■■□ 3.49
Ltn1Q6A009 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.76■■■■□ 3.47
Ltn1Q6A009 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.74■■■■□ 3.47
Ltn1Q6A009 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.68■■■■□ 3.46
Ltn1Q6A009 Psd-208ENSMUST00000224556 2034 ntBASIC36.67■■■■□ 3.46
Ltn1Q6A009 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
Ltn1Q6A009 Gm27325-201ENSMUST00000175467 74 ntBASIC36.43■■■■□ 3.42
Ltn1Q6A009 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.35■■■■□ 3.41
Ltn1Q6A009 Gm25262-201ENSMUST00000174934 133 ntBASIC36.35■■■■□ 3.41
Ltn1Q6A009 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.33■■■■□ 3.41
Ltn1Q6A009 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Ltn1Q6A009 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Ltn1Q6A009 Rab21-202ENSMUST00000218831 843 ntBASIC35.93■■■■□ 3.34
Ltn1Q6A009 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.92■■■■□ 3.34
Ltn1Q6A009 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.92■■■■□ 3.34
Ltn1Q6A009 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
Ltn1Q6A009 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.81■■■■□ 3.32
Ltn1Q6A009 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.81■■■■□ 3.32
Ltn1Q6A009 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
Ltn1Q6A009 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.72■■■■□ 3.31
Ltn1Q6A009 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Ltn1Q6A009 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.67■■■■□ 3.3
Ltn1Q6A009 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Ltn1Q6A009 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Ltn1Q6A009 Gm26115-201ENSMUST00000175605 87 ntBASIC35.64■■■■□ 3.3
Ltn1Q6A009 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.64■■■■□ 3.3
Ltn1Q6A009 Gm8109-201ENSMUST00000194076 746 ntBASIC35.61■■■■□ 3.29
Ltn1Q6A009 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Ltn1Q6A009 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
Ltn1Q6A009 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35.47■■■■□ 3.27
Ltn1Q6A009 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Ltn1Q6A009 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.4■■■■□ 3.26
Ltn1Q6A009 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.37■■■■□ 3.25
Ltn1Q6A009 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Ltn1Q6A009 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Ltn1Q6A009 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Ltn1Q6A009 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
Ltn1Q6A009 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
Ltn1Q6A009 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.23■■■■□ 3.23
Ltn1Q6A009 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
Ltn1Q6A009 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Ltn1Q6A009 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Ltn1Q6A009 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.14■■■■□ 3.22
Ltn1Q6A009 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Ltn1Q6A009 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
Ltn1Q6A009 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Ltn1Q6A009 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ltn1Q6A009 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ltn1Q6A009 Gm17082-201ENSMUST00000166043 1091 ntBASIC34.85■■■■□ 3.17
Ltn1Q6A009 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ltn1Q6A009 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.77■■■■□ 3.16
Ltn1Q6A009 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.77■■■■□ 3.16
Ltn1Q6A009 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ltn1Q6A009 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Ltn1Q6A009 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.67■■■■□ 3.14
Ltn1Q6A009 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC34.65■■■■□ 3.14
Ltn1Q6A009 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
Ltn1Q6A009 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Ltn1Q6A009 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Ltn1Q6A009 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34.52■■■■□ 3.12
Ltn1Q6A009 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34.49■■■■□ 3.11
Ltn1Q6A009 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
Ltn1Q6A009 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms