RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W SGM1P47166 707 aa7□□□□□ -1.29
CTF19YPL018W COS5P47187 383 aa7□□□□□ -1.29
CTF19YPL018W ORC5P50874 479 aa7□□□□□ -1.29
CTF19YPL018W SHE10P53075 577 aa7□□□□□ -1.29
CTF19YPL018W CUS1Q02554 436 aaPredicted RBP7□□□□□ -1.29
CTF19YPL018W CEF1Q03654 590 aaPredicted RBP7□□□□□ -1.29
CTF19YPL018W YLR287CQ05881 355 aa7□□□□□ -1.29
CTF19YPL018W SHS1Q07657 551 aa7□□□□□ -1.29
CTF19YPL018W RLP24Q07915 199 aaKnown RBP7□□□□□ -1.29
CTF19YPL018W CWC2Q12046 339 aaPredicted RBP7□□□□□ -1.29
CTF19YPL018W YDR524C-BQ3E6R4 66 aa7□□□□□ -1.29
CTF19YPL018W PHO13P19881 312 aa6.99□□□□□ -1.29
CTF19YPL018W SPO11P23179 398 aa6.99□□□□□ -1.29
CTF19YPL018W XRS2P33301 854 aa6.99□□□□□ -1.29
CTF19YPL018W NIP100P33420 868 aa6.99□□□□□ -1.29
CTF19YPL018W YKL023WP36103 277 aaKnown RBP6.99□□□□□ -1.29
CTF19YPL018W DRE2P36152 348 aa6.99□□□□□ -1.29
CTF19YPL018W SHM1P37292 490 aaPredicted RBP6.99□□□□□ -1.29
CTF19YPL018W RTT107P38850 1070 aa6.99□□□□□ -1.29
CTF19YPL018W OSW7P43611 510 aa6.99□□□□□ -1.29
CTF19YPL018W MNP1P53163 194 aaPredicted RBP6.99□□□□□ -1.29
CTF19YPL018W ENV11P53246 860 aa6.99□□□□□ -1.29
CTF19YPL018W YPL034WQ03083 165 aa6.99□□□□□ -1.29
CTF19YPL018W TRS130Q03660 1102 aa6.99□□□□□ -1.29
CTF19YPL018W DON1Q05610 365 aa6.99□□□□□ -1.29
CTF19YPL018W ECM7Q06200 448 aa6.99□□□□□ -1.29
CTF19YPL018W CDC53Q12018 815 aaKnown RBP6.99□□□□□ -1.29
CTF19YPL018W FAL1Q12099 399 aaKnown RBP6.99□□□□□ -1.29
CTF19YPL018W RRP6Q12149 733 aaKnown RBP6.99□□□□□ -1.29
CTF19YPL018W PDR1P12383 1068 aa6.98□□□□□ -1.29
CTF19YPL018W CYC8P14922 966 aa6.98□□□□□ -1.29
CTF19YPL018W SMC1P32908 1225 aa6.98□□□□□ -1.29
CTF19YPL018W MMS4P38257 691 aa6.98□□□□□ -1.29
CTF19YPL018W EFM2P38347 419 aa6.98□□□□□ -1.29
CTF19YPL018W TVP23P38962 199 aa6.98□□□□□ -1.29
CTF19YPL018W NPP2P39997 493 aa6.98□□□□□ -1.29
CTF19YPL018W ASN1P49089 572 aaKnown RBP6.98□□□□□ -1.29
CTF19YPL018W HST2P53686 357 aa6.98□□□□□ -1.29
CTF19YPL018W TBF1Q02457 562 aa6.98□□□□□ -1.29
CTF19YPL018W MUK1Q02866 612 aa6.98□□□□□ -1.29
CTF19YPL018W YLR297WQ05899 129 aa6.98□□□□□ -1.29
CTF19YPL018W PLP2Q12017 286 aa6.98□□□□□ -1.29
CTF19YPL018W SLX4Q12098 748 aa6.98□□□□□ -1.29
CTF19YPL018W ATG9Q12142 997 aa6.98□□□□□ -1.29
CTF19YPL018W ZPS1Q12512 249 aa6.98□□□□□ -1.29
CTF19YPL018W ADE4P04046 510 aaKnown RBP6.97□□□□□ -1.29
CTF19YPL018W POT1P27796 417 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
CTF19YPL018W PRR1P28708 518 aa6.97□□□□□ -1.29
CTF19YPL018W CBF2P32504 956 aa6.97□□□□□ -1.29
CTF19YPL018W MFT1P33441 392 aaKnown RBP6.97□□□□□ -1.29
CTF19YPL018W SPC42P36094 363 aa6.97□□□□□ -1.29
CTF19YPL018W MRX3P38172 270 aa6.97□□□□□ -1.29
CTF19YPL018W LAM5P43560 674 aa6.97□□□□□ -1.29
CTF19YPL018W CWC22P53333 577 aaKnown RBP6.97□□□□□ -1.29
CTF19YPL018W YNL134CP53912 376 aaKnown RBP6.97□□□□□ -1.29
CTF19YPL018W YNL115CP53925 644 aa6.97□□□□□ -1.29
CTF19YPL018W FMP30Q02883 468 aa6.97□□□□□ -1.29
CTF19YPL018W UME1Q03010 460 aa6.97□□□□□ -1.29
CTF19YPL018W ECM30Q06673 1274 aa6.97□□□□□ -1.29
CTF19YPL018W YPR078CQ06813 372 aa6.97□□□□□ -1.29
CTF19YPL018W PCD1Q12524 340 aa6.97□□□□□ -1.29
CTF19YPL018W TOM70P07213 617 aaKnown RBP6.96□□□□□ -1.3
CTF19YPL018W ADE2P21264 571 aaKnown RBP6.96□□□□□ -1.3
CTF19YPL018W RAM1P22007 431 aa6.96□□□□□ -1.3
CTF19YPL018W FUB1P25659 250 aa6.96□□□□□ -1.3
CTF19YPL018W SPC110P32380 944 aa6.96□□□□□ -1.3
CTF19YPL018W FTR1P40088 404 aa6.96□□□□□ -1.3
CTF19YPL018W FIG4P42837 879 aa6.96□□□□□ -1.3
CTF19YPL018W YFL040WP43562 540 aa6.96□□□□□ -1.3
CTF19YPL018W SMC3P47037 1230 aa6.96□□□□□ -1.3
CTF19YPL018W STR2P47164 639 aa6.96□□□□□ -1.3
CTF19YPL018W HFM1P51979 1187 aa6.96□□□□□ -1.3
CTF19YPL018W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
CTF19YPL018W CWC21Q03375 135 aaKnown RBP6.96□□□□□ -1.3
CTF19YPL018W DOT1Q04089 582 aaKnown RBP6.96□□□□□ -1.3
CTF19YPL018W RGA2Q06407 1009 aa6.96□□□□□ -1.3
CTF19YPL018W YCG1Q06680 1035 aa6.96□□□□□ -1.3
CTF19YPL018W APL4Q12028 832 aa6.96□□□□□ -1.3
CTF19YPL018W FKS1P38631 1876 aaKnown RBP6.96□□□□□ -1.3
CTF19YPL018W RPL4AP10664 362 aaKnown RBP6.95□□□□□ -1.3
CTF19YPL018W NAT1P12945 854 aaKnown RBP6.95□□□□□ -1.3
CTF19YPL018W RRP43P25359 394 aaPredicted RBP6.95□□□□□ -1.3
CTF19YPL018W NUD1P32336 851 aa6.95□□□□□ -1.3
CTF19YPL018W SWI3P32591 825 aa6.95□□□□□ -1.3
CTF19YPL018W BUD2P33314 1104 aa6.95□□□□□ -1.3
CTF19YPL018W TRM2P33753 639 aa6.95□□□□□ -1.3
CTF19YPL018W MNR2P35724 969 aa6.95□□□□□ -1.3
CTF19YPL018W SMC2P38989 1170 aaKnown RBP6.95□□□□□ -1.3
CTF19YPL018W VFA1P40080 203 aa6.95□□□□□ -1.3
CTF19YPL018W GCV2P49095 1034 aa6.95□□□□□ -1.3
CTF19YPL018W RPL4BP49626 362 aaKnown RBP6.95□□□□□ -1.3
CTF19YPL018W ALT2P52892 507 aa6.95□□□□□ -1.3
CTF19YPL018W BNI4P53858 892 aa6.95□□□□□ -1.3
CTF19YPL018W DOS2P54858 310 aa6.95□□□□□ -1.3
CTF19YPL018W TFB3Q03290 321 aa6.95□□□□□ -1.3
CTF19YPL018W CSR1Q06705 408 aaKnown RBP6.95□□□□□ -1.3
CTF19YPL018W HMI1Q12039 706 aa6.95□□□□□ -1.3
CTF19YPL018W COX4P04037 155 aa6.94□□□□□ -1.3
CTF19YPL018W ASP3-2P0CX77 362 aa6.94□□□□□ -1.3
CTF19YPL018W ASP3-3P0CX78 362 aa6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms