RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	NEW1	Q08972	1196 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	ATP16	Q12165	160 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	TAF3	Q12297	353 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	HXK1	P04806	485 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	CMD1	P06787	147 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	PRP6	P19735	899 aa	Predicted RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	ILV6	P25605	309 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	URA1	P28272	314 aa	Predicted RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	MLS1	P30952	554 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	MGM1	P32266	881 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	SAC6	P32599	642 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	FBP26	P32604	452 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	GYP6	P32806	458 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	AST1	P35183	429 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	VPS21	P36017	210 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	MNN2	P38069	597 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	HXT6	P39003	570 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	HXT7	P39004	570 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	AST2	P39945	430 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	BOI2	P39969	1040 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	ALG5	P40350	334 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	SNX4	P47057	423 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	ATP22	P50273	684 aa	Predicted RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	UBA2	P52488	636 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	YNL040W	P53960	456 aa	Predicted RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	ADE16	P54113	591 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	SLU7	Q02775	382 aa	Known RBP	5.04	□□□□□ -1.6
CLF1	YLR117C	MMT1	Q03218	510 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	SOV1	Q04748	898 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	RUP1	Q12242	671 aa		5.04	□□□□□ -1.6
CLF1	YLR117C	SEM1	O94742	89 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	SRV2	P17555	526 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	TEC1	P18412	486 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	PHO84	P25297	587 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	ARC19	P33204	171 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	MRPL40	P36534	297 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	YHL012W	P38709	493 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	JEM1	P40358	645 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	RIC1	P40395	1056 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
CLF1	YLR117C	YNL320W	P42840	284 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	FMP33	P46998	180 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	URB2	P47108	1174 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	UBP15	P50101	1230 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	KAP114	P53067	1004 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	DIP5	P53388	608 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	PTA1	Q01329	785 aa	Predicted RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	RPT6	Q01939	405 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	LGE1	Q02796	332 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	SHE9	Q04172	456 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	SMC5	Q08204	1093 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	YOL036W	Q08206	761 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	SSK22	P25390	1331 aa	Predicted RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	TY4B-H	P0C2J7	1802 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	TY4B-J	P47024	1803 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	YAK1	P14680	807 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	GFA1	P14742	717 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	POL30	P15873	258 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	URA4	P20051	364 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	BMH1	P29311	267 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	NAM7	P30771	971 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	SSO1	P32867	290 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	UBC6	P33296	250 aa	Predicted RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	YBL055C	P34220	418 aa	Predicted RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	TIF11	P38912	153 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	CAB2	P40506	365 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	IOC3	P43596	787 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	IML2	P47031	731 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	GNP1	P48813	663 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	KEL2	P50090	882 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	SPC105	P53148	917 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	TMA20	P89886	181 aa	Predicted RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	YMR114C	Q04471	368 aa	Known RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	COX20	Q04935	205 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	BUG1	Q12191	341 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	TIP41	Q12199	356 aa		5.03	□□□□□ -1.6
CLF1	YLR117C	SNU66	Q12420	587 aa	Predicted RBP	5.03	□□□□□ -1.6
CLF1	YLR117C	COQ4	O13525	335 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	YAP1	P19880	650 aa	Known RBP	5.02	□□□□□ -1.61
CLF1	YLR117C	KTR1	P27810	393 aa	Known RBP	5.02	□□□□□ -1.61
CLF1	YLR117C	HXT1	P32465	570 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	BMH2	P34730	273 aa	Known RBP	5.02	□□□□□ -1.61
CLF1	YLR117C	MIF2	P35201	549 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	YRO2	P38079	344 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	DLD3	P39976	496 aa	Known RBP	5.02	□□□□□ -1.61
CLF1	YLR117C	AVT6	P40074	448 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	SMX2	P40204	77 aa	Known RBP	5.02	□□□□□ -1.61
CLF1	YLR117C	RPT2	P40327	437 aa	Known RBP	5.02	□□□□□ -1.61
CLF1	YLR117C	DCP2	P53550	970 aa	Known RBP	5.02	□□□□□ -1.61
CLF1	YLR117C	TOF1	P53840	1238 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	UME1	Q03010	460 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	ECM11	Q04110	302 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	SIL1	Q08199	421 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	AVO1	Q08236	1176 aa		5.02	□□□□□ -1.61
CLF1	YLR117C	CDC53	Q12018	815 aa	Known RBP	5.02	□□□□□ -1.61
CLF1	YLR117C	FUS1	P11710	512 aa		5.01	□□□□□ -1.61
CLF1	YLR117C	KIN2	P13186	1147 aa	Known RBP	5.01	□□□□□ -1.61
CLF1	YLR117C	GSY1	P23337	708 aa		5.01	□□□□□ -1.61
CLF1	YLR117C	ACP1	P32463	125 aa		5.01	□□□□□ -1.61
CLF1	YLR117C	HXT3	P32466	567 aa	Known RBP	5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms