RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W CLA4P48562 842 aa7.34□□□□□ -1.23
NUP49YGL172W FOL2P51601 243 aaKnown RBP7.34□□□□□ -1.23
NUP49YGL172W DON1Q05610 365 aa7.34□□□□□ -1.23
NUP49YGL172W RLP24Q07915 199 aaKnown RBP7.34□□□□□ -1.23
NUP49YGL172W FAL1Q12099 399 aaKnown RBP7.34□□□□□ -1.23
NUP49YGL172W PCD1Q12524 340 aa7.34□□□□□ -1.23
NUP49YGL172W RPS6AP0CX37 236 aaKnown RBP7.33□□□□□ -1.24
NUP49YGL172W RPS6BP0CX38 236 aaPredicted RBP7.33□□□□□ -1.24
NUP49YGL172W RPL4AP10664 362 aaKnown RBP7.33□□□□□ -1.24
NUP49YGL172W RAD54P32863 898 aa7.33□□□□□ -1.24
NUP49YGL172W BUD2P33314 1104 aa7.33□□□□□ -1.24
NUP49YGL172W MIC60P36112 540 aa7.33□□□□□ -1.24
NUP49YGL172W UBX7P38349 436 aa7.33□□□□□ -1.24
NUP49YGL172W ATH1P48016 1211 aa7.33□□□□□ -1.24
NUP49YGL172W RPL4BP49626 362 aaKnown RBP7.33□□□□□ -1.24
NUP49YGL172W APL1P27351 700 aa7.32□□□□□ -1.24
NUP49YGL172W PRR1P28708 518 aa7.32□□□□□ -1.24
NUP49YGL172W SEC65P29478 273 aa7.32□□□□□ -1.24
NUP49YGL172W GUT1P32190 709 aa7.32□□□□□ -1.24
NUP49YGL172W YKL023WP36103 277 aaKnown RBP7.32□□□□□ -1.24
NUP49YGL172W SHM1P37292 490 aaPredicted RBP7.32□□□□□ -1.24
NUP49YGL172W YHL026CP38740 315 aa7.32□□□□□ -1.24
NUP49YGL172W SPO74P45819 413 aa7.32□□□□□ -1.24
NUP49YGL172W FYV8P46949 817 aaKnown RBP7.32□□□□□ -1.24
NUP49YGL172W ALT2P52892 507 aa7.32□□□□□ -1.24
NUP49YGL172W CWC21Q03375 135 aaKnown RBP7.32□□□□□ -1.24
NUP49YGL172W CEF1Q03654 590 aaPredicted RBP7.32□□□□□ -1.24
NUP49YGL172W MAG2Q06436 670 aaKnown RBP7.32□□□□□ -1.24
NUP49YGL172W CWC2Q12046 339 aaPredicted RBP7.32□□□□□ -1.24
NUP49YGL172W SLX4Q12098 748 aa7.32□□□□□ -1.24
NUP49YGL172W SSB1P11484 613 aaKnown RBP7.31□□□□□ -1.24
NUP49YGL172W BIO2P32451 375 aa7.31□□□□□ -1.24
NUP49YGL172W RPT1P33299 467 aaKnown RBP7.31□□□□□ -1.24
NUP49YGL172W POA1P38218 177 aa7.31□□□□□ -1.24
NUP49YGL172W YAP1801P38856 637 aa7.31□□□□□ -1.24
NUP49YGL172W SSB2P40150 613 aaKnown RBP7.31□□□□□ -1.24
NUP49YGL172W COS5P47187 383 aa7.31□□□□□ -1.24
NUP49YGL172W YGR035CP53222 116 aa7.31□□□□□ -1.24
NUP49YGL172W TBF1Q02457 562 aa7.31□□□□□ -1.24
NUP49YGL172W IME1P21190 360 aa7.3□□□□□ -1.24
NUP49YGL172W CBF2P32504 956 aa7.3□□□□□ -1.24
NUP49YGL172W XRS2P33301 854 aa7.3□□□□□ -1.24
NUP49YGL172W CSE2P33308 149 aa7.3□□□□□ -1.24
NUP49YGL172W TRM2P33753 639 aa7.3□□□□□ -1.24
NUP49YGL172W FTR1P40088 404 aa7.3□□□□□ -1.24
NUP49YGL172W ESL1P40456 1118 aa7.3□□□□□ -1.24
NUP49YGL172W ALG11P53954 548 aaKnown RBP7.3□□□□□ -1.24
NUP49YGL172W RGA2Q06407 1009 aa7.3□□□□□ -1.24
NUP49YGL172W YOL036WQ08206 761 aa7.3□□□□□ -1.24
NUP49YGL172W YOR022CQ12204 715 aa7.3□□□□□ -1.24
NUP49YGL172W OSH2Q12451 1283 aa7.3□□□□□ -1.24
NUP49YGL172W ASP3-2P0CX77 362 aa7.29□□□□□ -1.24
NUP49YGL172W ASP3-3P0CX78 362 aa7.29□□□□□ -1.24
NUP49YGL172W ASP3-4P0CX79 362 aa7.29□□□□□ -1.24
NUP49YGL172W ASP3-1P0CZ17 362 aa7.29□□□□□ -1.24
NUP49YGL172W SPO11P23179 398 aa7.29□□□□□ -1.24
NUP49YGL172W SWI3P32591 825 aa7.29□□□□□ -1.24
NUP49YGL172W RRN6P32786 894 aa7.29□□□□□ -1.24
NUP49YGL172W EFM2P38347 419 aa7.29□□□□□ -1.24
NUP49YGL172W MSC7P38694 644 aa7.29□□□□□ -1.24
NUP49YGL172W RTT107P38850 1070 aa7.29□□□□□ -1.24
NUP49YGL172W JHD1P40034 492 aa7.29□□□□□ -1.24
NUP49YGL172W YER186CP40101 306 aa7.29□□□□□ -1.24
NUP49YGL172W FIG4P42837 879 aa7.29□□□□□ -1.24
NUP49YGL172W ISM1P48526 1002 aa7.29□□□□□ -1.24
NUP49YGL172W VPS75P53853 264 aa7.29□□□□□ -1.24
NUP49YGL172W YNL108CP53929 270 aa7.29□□□□□ -1.24
NUP49YGL172W YLR297WQ05899 129 aa7.29□□□□□ -1.24
NUP49YGL172W TAO3P40468 2376 aa7.29□□□□□ -1.24
NUP49YGL172W NAT1P12945 854 aaKnown RBP7.28□□□□□ -1.24
NUP49YGL172W RSA4P25382 515 aaKnown RBP7.28□□□□□ -1.24
NUP49YGL172W MCM2P29469 868 aa7.28□□□□□ -1.24
NUP49YGL172W NIP100P33420 868 aa7.28□□□□□ -1.24
NUP49YGL172W MPE1P35728 441 aaKnown RBP7.28□□□□□ -1.24
NUP49YGL172W HEL1P36113 551 aa7.28□□□□□ -1.24
NUP49YGL172W STB4P50104 949 aa7.28□□□□□ -1.24
NUP49YGL172W HFM1P51979 1187 aa7.28□□□□□ -1.24
NUP49YGL172W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
NUP49YGL172W SKY1Q03656 742 aa7.28□□□□□ -1.24
NUP49YGL172W YLR287CQ05881 355 aa7.28□□□□□ -1.24
NUP49YGL172W CSR1Q06705 408 aaKnown RBP7.28□□□□□ -1.24
NUP49YGL172W IWR1Q07532 353 aaPredicted RBP7.28□□□□□ -1.24
NUP49YGL172W PHO13P19881 312 aa7.27□□□□□ -1.24
NUP49YGL172W PTC4P38089 393 aa7.27□□□□□ -1.24
NUP49YGL172W SLX1P38324 304 aa7.27□□□□□ -1.24
NUP49YGL172W DAS1P47005 663 aa7.27□□□□□ -1.24
NUP49YGL172W RPA49Q01080 415 aaPredicted RBP7.27□□□□□ -1.24
NUP49YGL172W UME1Q03010 460 aa7.27□□□□□ -1.24
NUP49YGL172W YLR455WQ06188 304 aa7.27□□□□□ -1.24
NUP49YGL172W DNL4Q08387 944 aaPredicted RBP7.27□□□□□ -1.24
NUP49YGL172W SGT2Q12118 346 aaKnown RBP7.27□□□□□ -1.24
NUP49YGL172W RRP6Q12149 733 aaKnown RBP7.27□□□□□ -1.24
NUP49YGL172W PUS1Q12211 544 aaKnown RBP7.27□□□□□ -1.24
NUP49YGL172W YDL206WQ12424 762 aa7.27□□□□□ -1.24
NUP49YGL172W AHC1Q12433 566 aa7.27□□□□□ -1.24
NUP49YGL172W MSD1P15179 658 aaKnown RBP7.27□□□□□ -1.25
NUP49YGL172W RRT12P25381 491 aa7.27□□□□□ -1.25
NUP49YGL172W CDC11P32458 415 aa7.27□□□□□ -1.25
NUP49YGL172W SMC1P32908 1225 aa7.27□□□□□ -1.25
NUP49YGL172W VFA1P40080 203 aa7.27□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms