RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W TAF10Q12030 206 aa5.34□□□□□ -1.55
CDC4YFL009W OCA6Q12454 224 aa5.34□□□□□ -1.55
CDC4YFL009W IMP2'P32351 346 aa5.34□□□□□ -1.56
CDC4YFL009W ASH1P34233 588 aa5.34□□□□□ -1.56
CDC4YFL009W UBP12P39538 1254 aa5.34□□□□□ -1.56
CDC4YFL009W PIC2P40035 300 aa5.34□□□□□ -1.56
CDC4YFL009W ALA1P40825 983 aaKnown RBP5.34□□□□□ -1.56
CDC4YFL009W POL31P46957 487 aa5.34□□□□□ -1.56
CDC4YFL009W VTC4P47075 721 aa5.34□□□□□ -1.56
CDC4YFL009W GTR1Q00582 310 aa5.34□□□□□ -1.56
CDC4YFL009W MRD1Q06106 887 aaKnown RBP5.34□□□□□ -1.56
CDC4YFL009W MTF2P10849 440 aa5.33□□□□□ -1.56
CDC4YFL009W VPH2P32341 215 aa5.33□□□□□ -1.56
CDC4YFL009W YET1P35723 206 aa5.33□□□□□ -1.56
CDC4YFL009W GIP1P38229 639 aa5.33□□□□□ -1.56
CDC4YFL009W HSM3P38348 480 aa5.33□□□□□ -1.56
CDC4YFL009W TDA3P38758 523 aa5.33□□□□□ -1.56
CDC4YFL009W REV7P38927 245 aa5.33□□□□□ -1.56
CDC4YFL009W SKP1P52286 194 aa5.33□□□□□ -1.56
CDC4YFL009W DSL1P53847 754 aa5.33□□□□□ -1.56
CDC4YFL009W YML108WQ03759 105 aa5.33□□□□□ -1.56
CDC4YFL009W DAL4Q04895 635 aa5.33□□□□□ -1.56
CDC4YFL009W HMI1Q12039 706 aa5.33□□□□□ -1.56
CDC4YFL009W SGT2Q12118 346 aaKnown RBP5.33□□□□□ -1.56
CDC4YFL009W DCS2Q12123 353 aa5.33□□□□□ -1.56
CDC4YFL009W RRP6Q12149 733 aaKnown RBP5.33□□□□□ -1.56
CDC4YFL009W UTP10P42945 1769 aaKnown RBP5.33□□□□□ -1.56
CDC4YFL009W RSF2P46974 1380 aa5.33□□□□□ -1.56
CDC4YFL009W PEP3P27801 918 aa5.32□□□□□ -1.56
CDC4YFL009W PRP40P33203 583 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W CSE1P33307 960 aa5.32□□□□□ -1.56
CDC4YFL009W YKL091CP33324 310 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W ETP1P38748 585 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W KAP123P40069 1113 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W YIR042CP40586 236 aa5.32□□□□□ -1.56
CDC4YFL009W AXL1P40851 1208 aa5.32□□□□□ -1.56
CDC4YFL009W STB1P42845 420 aa5.32□□□□□ -1.56
CDC4YFL009W FYV8P46949 817 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W PTK2P47116 818 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
CDC4YFL009W YKR005CQ02203 525 aa5.32□□□□□ -1.56
CDC4YFL009W YPL109CQ02981 657 aa5.32□□□□□ -1.56
CDC4YFL009W NGL3Q03210 505 aa5.32□□□□□ -1.56
CDC4YFL009W LPD1P09624 499 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W SPO12P17123 173 aa5.32□□□□□ -1.56
CDC4YFL009W PRE9P23638 258 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W MCM5P29496 775 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W SPC42P36094 363 aa5.32□□□□□ -1.56
CDC4YFL009W DBP7P36120 742 aaKnown RBP5.32□□□□□ -1.56
CDC4YFL009W SHQ1P40486 507 aaPredicted RBP5.32□□□□□ -1.56
CDC4YFL009W TMA22P47089 198 aaPredicted RBP5.32□□□□□ -1.56
CDC4YFL009W ATG26Q06321 1198 aa5.32□□□□□ -1.56
CDC4YFL009W SPP382Q06411 708 aaPredicted RBP5.32□□□□□ -1.56
CDC4YFL009W YLR001CQ07895 862 aa5.32□□□□□ -1.56
CDC4YFL009W GNT1Q12096 491 aa5.32□□□□□ -1.56
CDC4YFL009W MSH5Q12175 901 aa5.32□□□□□ -1.56
CDC4YFL009W VPS5Q92331 675 aa5.32□□□□□ -1.56
CDC4YFL009W YPR089WO13585 888 aa5.31□□□□□ -1.56
CDC4YFL009W HCA4P20448 770 aaKnown RBP5.31□□□□□ -1.56
CDC4YFL009W RAD57P25301 460 aa5.31□□□□□ -1.56
CDC4YFL009W SRB4P32569 687 aa5.31□□□□□ -1.56
CDC4YFL009W PEP7P32609 515 aa5.31□□□□□ -1.56
CDC4YFL009W HEK2P38199 381 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
CDC4YFL009W ATG14P38270 344 aa5.31□□□□□ -1.56
CDC4YFL009W INA22P40576 216 aa5.31□□□□□ -1.56
CDC4YFL009W YJR098CP47139 656 aa5.31□□□□□ -1.56
CDC4YFL009W RBL2P48606 106 aaKnown RBP5.31□□□□□ -1.56
CDC4YFL009W PCL10P53124 433 aa5.31□□□□□ -1.56
CDC4YFL009W HOP2P53187 214 aa5.31□□□□□ -1.56
CDC4YFL009W ZPR1P53303 486 aaKnown RBP5.31□□□□□ -1.56
CDC4YFL009W FAR11P53917 953 aa5.31□□□□□ -1.56
CDC4YFL009W TIM11P81449 96 aaPredicted RBP5.31□□□□□ -1.56
CDC4YFL009W RCF1Q03713 159 aa5.31□□□□□ -1.56
CDC4YFL009W YCS4Q06156 1176 aa5.31□□□□□ -1.56
CDC4YFL009W VAM6Q07468 1049 aa5.31□□□□□ -1.56
CDC4YFL009W PIM1P36775 1133 aa5.31□□□□□ -1.56
CDC4YFL009W CTM1P38818 585 aa5.31□□□□□ -1.56
CDC4YFL009W TDA11P38854 504 aa5.31□□□□□ -1.56
CDC4YFL009W SCS2P40075 244 aaKnown RBP5.31□□□□□ -1.56
CDC4YFL009W HFM1P51979 1187 aa5.31□□□□□ -1.56
CDC4YFL009W YNR040WP53736 256 aa5.31□□□□□ -1.56
CDC4YFL009W NOP15P53927 220 aaPredicted RBP5.31□□□□□ -1.56
CDC4YFL009W CTF4Q01454 927 aa5.31□□□□□ -1.56
CDC4YFL009W MSH6Q03834 1242 aa5.31□□□□□ -1.56
CDC4YFL009W DNL4Q08387 944 aaPredicted RBP5.31□□□□□ -1.56
CDC4YFL009W VIK1Q12045 647 aa5.31□□□□□ -1.56
CDC4YFL009W ARG4P04076 463 aaPredicted RBP5.3□□□□□ -1.56
CDC4YFL009W ARG82P07250 355 aa5.3□□□□□ -1.56
CDC4YFL009W PIF1P07271 859 aa5.3□□□□□ -1.56
CDC4YFL009W CKI1P20485 582 aa5.3□□□□□ -1.56
CDC4YFL009W HSP78P33416 811 aa5.3□□□□□ -1.56
CDC4YFL009W PET112P33893 541 aa5.3□□□□□ -1.56
CDC4YFL009W YEL1P34225 687 aa5.3□□□□□ -1.56
CDC4YFL009W LAS1P36146 502 aaPredicted RBP5.3□□□□□ -1.56
CDC4YFL009W MAD1P40957 749 aa5.3□□□□□ -1.56
CDC4YFL009W YJR115WP47152 169 aa5.3□□□□□ -1.56
CDC4YFL009W ERP6P53198 216 aa5.3□□□□□ -1.56
CDC4YFL009W LSC1P53598 329 aaKnown RBP5.3□□□□□ -1.56
CDC4YFL009W UTP5Q04177 643 aaKnown RBP5.3□□□□□ -1.56
CDC4YFL009W YLR287CQ05881 355 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms