RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W ULP2P40537 1034 aaPredicted RBP7.3□□□□□ -1.24
SWD1YAR003W FYV8P46949 817 aaKnown RBP7.3□□□□□ -1.24
SWD1YAR003W CCM1P48237 864 aaPredicted RBP7.3□□□□□ -1.24
SWD1YAR003W CTR1P49573 406 aa7.3□□□□□ -1.24
SWD1YAR003W YGR237CP50089 785 aa7.3□□□□□ -1.24
SWD1YAR003W VID30P53076 958 aa7.3□□□□□ -1.24
SWD1YAR003W TOF1P53840 1238 aa7.3□□□□□ -1.24
SWD1YAR003W SSL2Q00578 843 aa7.3□□□□□ -1.24
SWD1YAR003W WAR1Q03631 944 aa7.3□□□□□ -1.24
SWD1YAR003W YMR321CQ04898 105 aa7.3□□□□□ -1.24
SWD1YAR003W NOC3Q07896 663 aaPredicted RBP7.3□□□□□ -1.24
SWD1YAR003W SWI6P09959 803 aa7.29□□□□□ -1.24
SWD1YAR003W POX1P13711 748 aa7.29□□□□□ -1.24
SWD1YAR003W MSH3P25336 1018 aa7.29□□□□□ -1.24
SWD1YAR003W EAF5P39995 279 aa7.29□□□□□ -1.24
SWD1YAR003W TOS3P43637 560 aa7.29□□□□□ -1.24
SWD1YAR003W YJR107WP47145 328 aa7.29□□□□□ -1.24
SWD1YAR003W RPS7BP48164 190 aaKnown RBP7.29□□□□□ -1.24
SWD1YAR003W EBS1Q03466 884 aaKnown RBP7.29□□□□□ -1.24
SWD1YAR003W CUR1Q06469 252 aa7.29□□□□□ -1.24
SWD1YAR003W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
SWD1YAR003W YPL216WQ08964 1102 aa7.29□□□□□ -1.24
SWD1YAR003W YPL277CQ08989 487 aa7.29□□□□□ -1.24
SWD1YAR003W OSW2Q12202 724 aa7.29□□□□□ -1.24
SWD1YAR003W MED1Q12321 566 aa7.29□□□□□ -1.24
SWD1YAR003W YDR461C-AQ2V2P7 80 aa7.29□□□□□ -1.24
SWD1YAR003W PHO8P11491 566 aa7.28□□□□□ -1.24
SWD1YAR003W MAS2P11914 482 aa7.28□□□□□ -1.24
SWD1YAR003W SNA3P14359 133 aa7.28□□□□□ -1.24
SWD1YAR003W IRE1P32361 1115 aa7.28□□□□□ -1.24
SWD1YAR003W COS5P47187 383 aa7.28□□□□□ -1.24
SWD1YAR003W GIR2Q03768 265 aaPredicted RBP7.28□□□□□ -1.24
SWD1YAR003W TY1A-MR1Q04215 440 aa7.28□□□□□ -1.24
SWD1YAR003W YAP7Q08182 245 aa7.28□□□□□ -1.24
SWD1YAR003W HIF1Q12373 385 aa7.28□□□□□ -1.24
SWD1YAR003W YOR131CQ12486 218 aa7.28□□□□□ -1.24
SWD1YAR003W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
SWD1YAR003W RME1P32338 300 aaKnown RBP7.27□□□□□ -1.25
SWD1YAR003W YSC83P32792 385 aa7.27□□□□□ -1.25
SWD1YAR003W MPE1P35728 441 aaKnown RBP7.27□□□□□ -1.25
SWD1YAR003W PSY4P38193 441 aa7.27□□□□□ -1.25
SWD1YAR003W CTM1P38818 585 aa7.27□□□□□ -1.25
SWD1YAR003W SSN3P39073 555 aa7.27□□□□□ -1.25
SWD1YAR003W HUL4P40985 892 aa7.27□□□□□ -1.25
SWD1YAR003W SUM1P46676 1062 aa7.27□□□□□ -1.25
SWD1YAR003W NBP1P52919 319 aaPredicted RBP7.27□□□□□ -1.25
SWD1YAR003W YML020WQ03722 664 aa7.27□□□□□ -1.25
SWD1YAR003W COG4Q06096 861 aa7.27□□□□□ -1.25
SWD1YAR003W TMA16Q08687 178 aa7.27□□□□□ -1.25
SWD1YAR003W HFI1Q12060 488 aa7.27□□□□□ -1.25
SWD1YAR003W UBC1P21734 215 aaKnown RBP7.26□□□□□ -1.25
SWD1YAR003W EFT1P32324 842 aaKnown RBP7.26□□□□□ -1.25
SWD1YAR003W PAH1P32567 862 aa7.26□□□□□ -1.25
SWD1YAR003W COT1P32798 439 aa7.26□□□□□ -1.25
SWD1YAR003W PEP12P32854 288 aa7.26□□□□□ -1.25
SWD1YAR003W SMY2P32909 740 aaKnown RBP7.26□□□□□ -1.25
SWD1YAR003W YET1P35723 206 aa7.26□□□□□ -1.25
SWD1YAR003W AIP1P46680 615 aaKnown RBP7.26□□□□□ -1.25
SWD1YAR003W BRE5P53741 515 aaKnown RBP7.26□□□□□ -1.25
SWD1YAR003W VPS75P53853 264 aa7.26□□□□□ -1.25
SWD1YAR003W ROD1Q02805 837 aa7.26□□□□□ -1.25
SWD1YAR003W YDL057WQ07379 328 aa7.26□□□□□ -1.25
SWD1YAR003W SPO75Q07798 868 aa7.26□□□□□ -1.25
SWD1YAR003W TCO89Q08921 799 aa7.26□□□□□ -1.25
SWD1YAR003W RTP1Q12751 981 aa7.26□□□□□ -1.25
SWD1YAR003W DED1P06634 604 aaKnown RBP7.25□□□□□ -1.25
SWD1YAR003W DAL7P21826 554 aa7.25□□□□□ -1.25
SWD1YAR003W APL1P27351 700 aa7.25□□□□□ -1.25
SWD1YAR003W SPC110P32380 944 aa7.25□□□□□ -1.25
SWD1YAR003W PGM2P37012 569 aaKnown RBP7.25□□□□□ -1.25
SWD1YAR003W FLR1P38124 548 aa7.25□□□□□ -1.25
SWD1YAR003W SKP2P42843 763 aa7.25□□□□□ -1.25
SWD1YAR003W SMC3P47037 1230 aa7.25□□□□□ -1.25
SWD1YAR003W ACF4P47129 309 aa7.25□□□□□ -1.25
SWD1YAR003W YGR035CP53222 116 aa7.25□□□□□ -1.25
SWD1YAR003W RTT102P53330 157 aa7.25□□□□□ -1.25
SWD1YAR003W DAK1P54838 584 aaKnown RBP7.25□□□□□ -1.25
SWD1YAR003W MSC2Q03455 724 aa7.25□□□□□ -1.25
SWD1YAR003W COQ9Q05779 260 aa7.25□□□□□ -1.25
SWD1YAR003W MLH2Q07980 695 aa7.25□□□□□ -1.25
SWD1YAR003W YOL075CQ08234 1294 aa7.25□□□□□ -1.25
SWD1YAR003W SUT2Q12286 268 aa7.25□□□□□ -1.25
SWD1YAR003W CYC8P14922 966 aa7.24□□□□□ -1.25
SWD1YAR003W MCM2P29469 868 aa7.24□□□□□ -1.25
SWD1YAR003W RPC25P35718 212 aa7.24□□□□□ -1.25
SWD1YAR003W MIP6P38760 659 aaKnown RBP7.24□□□□□ -1.25
SWD1YAR003W AVT1P47082 602 aa7.24□□□□□ -1.25
SWD1YAR003W JJJ3P47138 172 aa7.24□□□□□ -1.25
SWD1YAR003W SHE10P53075 577 aa7.24□□□□□ -1.25
SWD1YAR003W VPS62P53285 467 aa7.24□□□□□ -1.25
SWD1YAR003W ARK1P53974 638 aa7.24□□□□□ -1.25
SWD1YAR003W YLR287CQ05881 355 aa7.24□□□□□ -1.25
SWD1YAR003W PLP2Q12017 286 aa7.24□□□□□ -1.25
SWD1YAR003W TOM1Q03280 3268 aa7.24□□□□□ -1.25
SWD1YAR003W SWI5P08153 709 aa7.23□□□□□ -1.25
SWD1YAR003W SSB1P11484 613 aaKnown RBP7.23□□□□□ -1.25
SWD1YAR003W CHS2P14180 963 aa7.23□□□□□ -1.25
SWD1YAR003W KIN82P25341 720 aa7.23□□□□□ -1.25
SWD1YAR003W SEC65P29478 273 aa7.23□□□□□ -1.25
SWD1YAR003W NAM7P30771 971 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms