RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C GUA1P38625 525 aaKnown RBP9.04□□□□□ -0.96
SRP54YPR088C SMC2P38989 1170 aaKnown RBP9.04□□□□□ -0.96
SRP54YPR088C ATG3P40344 310 aa9.04□□□□□ -0.96
SRP54YPR088C PSF2P40359 213 aa9.04□□□□□ -0.96
SRP54YPR088C SHQ1P40486 507 aaPredicted RBP9.04□□□□□ -0.96
SRP54YPR088C SDS3P40505 327 aa9.04□□□□□ -0.96
SRP54YPR088C SMC3P47037 1230 aa9.04□□□□□ -0.96
SRP54YPR088C SHE10P53075 577 aa9.04□□□□□ -0.96
SRP54YPR088C UTP5Q04177 643 aaKnown RBP9.04□□□□□ -0.96
SRP54YPR088C YPR078CQ06813 372 aa9.04□□□□□ -0.96
SRP54YPR088C HFI1Q12060 488 aa9.04□□□□□ -0.96
SRP54YPR088C XRS2P33301 854 aa9.03□□□□□ -0.96
SRP54YPR088C NIP100P33420 868 aa9.03□□□□□ -0.96
SRP54YPR088C IES1P43579 692 aa9.03□□□□□ -0.96
SRP54YPR088C ACF4P47129 309 aa9.03□□□□□ -0.96
SRP54YPR088C JJJ3P47138 172 aa9.03□□□□□ -0.96
SRP54YPR088C MSC2Q03455 724 aa9.03□□□□□ -0.96
SRP54YPR088C CSR1Q06705 408 aaKnown RBP9.03□□□□□ -0.96
SRP54YPR088C SNA3P14359 133 aa9.02□□□□□ -0.96
SRP54YPR088C TUP1P16649 713 aa9.02□□□□□ -0.96
SRP54YPR088C VMA1P17255 1071 aaKnown RBP9.02□□□□□ -0.96
SRP54YPR088C PDC6P26263 563 aaKnown RBP9.02□□□□□ -0.96
SRP54YPR088C SMC1P32908 1225 aa9.02□□□□□ -0.96
SRP54YPR088C YKL023WP36103 277 aaKnown RBP9.02□□□□□ -0.96
SRP54YPR088C NPP2P39997 493 aa9.02□□□□□ -0.96
SRP54YPR088C SKP2P42843 763 aa9.02□□□□□ -0.96
SRP54YPR088C CUL3P53202 744 aa9.02□□□□□ -0.96
SRP54YPR088C BRE5P53741 515 aaKnown RBP9.02□□□□□ -0.96
SRP54YPR088C UTP14Q04500 899 aaKnown RBP9.02□□□□□ -0.96
SRP54YPR088C ATG11Q12527 1178 aa9.02□□□□□ -0.96
SRP54YPR088C MTF2P10849 440 aa9.02□□□□□ -0.97
SRP54YPR088C SEC23P15303 768 aaKnown RBP9.02□□□□□ -0.97
SRP54YPR088C AFT1P22149 690 aa9.02□□□□□ -0.97
SRP54YPR088C BCS1P32839 456 aa9.02□□□□□ -0.97
SRP54YPR088C CCC2P38995 1004 aa9.02□□□□□ -0.97
SRP54YPR088C YJR107WP47145 328 aa9.02□□□□□ -0.97
SRP54YPR088C HSH155P49955 971 aaKnown RBP9.02□□□□□ -0.97
SRP54YPR088C YDR090CQ03193 310 aa9.02□□□□□ -0.97
SRP54YPR088C ECM7Q06200 448 aa9.02□□□□□ -0.97
SRP54YPR088C OPY2Q06810 360 aa9.02□□□□□ -0.97
SRP54YPR088C SUT2Q12286 268 aa9.02□□□□□ -0.97
SRP54YPR088C YOL098CQ12496 1037 aa9.02□□□□□ -0.97
SRP54YPR088C PIN4P34217 668 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
SRP54YPR088C CAJ1P39101 391 aa9.01□□□□□ -0.97
SRP54YPR088C PRY3P47033 881 aa9.01□□□□□ -0.97
SRP54YPR088C TAD1P53065 400 aa9.01□□□□□ -0.97
SRP54YPR088C ENV11P53246 860 aa9.01□□□□□ -0.97
SRP54YPR088C DAK1P54838 584 aaKnown RBP9.01□□□□□ -0.97
SRP54YPR088C TMT1P32643 299 aa9□□□□□ -0.97
SRP54YPR088C STO1P34160 861 aaKnown RBP9□□□□□ -0.97
SRP54YPR088C SCD6P45978 349 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
SRP54YPR088C ASN1P49089 572 aaKnown RBP9□□□□□ -0.97
SRP54YPR088C APT1P49435 187 aaKnown RBP9□□□□□ -0.97
SRP54YPR088C ORC5P50874 479 aa9□□□□□ -0.97
SRP54YPR088C ESBP6P53918 673 aa9□□□□□ -0.97
SRP54YPR088C UBP3Q01477 912 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
SRP54YPR088C KIP1P28742 1111 aa8.99□□□□□ -0.97
SRP54YPR088C MCX1P38323 520 aaPredicted RBP8.99□□□□□ -0.97
SRP54YPR088C AIM21P40563 679 aa8.99□□□□□ -0.97
SRP54YPR088C MNP1P53163 194 aaPredicted RBP8.99□□□□□ -0.97
SRP54YPR088C TSR1Q07381 788 aaKnown RBP8.99□□□□□ -0.97
SRP54YPR088C SLX4Q12098 748 aa8.99□□□□□ -0.97
SRP54YPR088C YDL206WQ12424 762 aa8.99□□□□□ -0.97
SRP54YPR088C YOR131CQ12486 218 aa8.99□□□□□ -0.97
SRP54YPR088C RTP1Q12751 981 aa8.99□□□□□ -0.97
SRP54YPR088C TOM70P07213 617 aaKnown RBP8.98□□□□□ -0.97
SRP54YPR088C WHI2P12611 486 aa8.98□□□□□ -0.97
SRP54YPR088C PET123P17558 318 aa8.98□□□□□ -0.97
SRP54YPR088C MSS51P32335 436 aa8.98□□□□□ -0.97
SRP54YPR088C RAD54P32863 898 aa8.98□□□□□ -0.97
SRP54YPR088C JNM1P36224 373 aa8.98□□□□□ -0.97
SRP54YPR088C VID24P38263 362 aa8.98□□□□□ -0.97
SRP54YPR088C SEC9P40357 651 aa8.98□□□□□ -0.97
SRP54YPR088C EFM4P40516 257 aa8.98□□□□□ -0.97
SRP54YPR088C HXT8P40886 569 aa8.98□□□□□ -0.97
SRP54YPR088C MMM1P41800 426 aa8.98□□□□□ -0.97
SRP54YPR088C CUS1Q02554 436 aaPredicted RBP8.98□□□□□ -0.97
SRP54YPR088C TRS130Q03660 1102 aa8.98□□□□□ -0.97
SRP54YPR088C SKG6P32900 734 aaPredicted RBP8.98□□□□□ -0.97
SRP54YPR088C FTR1P40088 404 aa8.98□□□□□ -0.97
SRP54YPR088C TPO2P53283 614 aa8.98□□□□□ -0.97
SRP54YPR088C RPA49Q01080 415 aaPredicted RBP8.98□□□□□ -0.97
SRP54YPR088C ULP1Q02724 621 aa8.98□□□□□ -0.97
SRP54YPR088C DAS2Q12084 232 aa8.98□□□□□ -0.97
SRP54YPR088C MDM20Q12387 796 aaKnown RBP8.98□□□□□ -0.97
SRP54YPR088C NAT1P12945 854 aaKnown RBP8.97□□□□□ -0.97
SRP54YPR088C RAD57P25301 460 aa8.97□□□□□ -0.97
SRP54YPR088C SWI3P32591 825 aa8.97□□□□□ -0.97
SRP54YPR088C MRX3P38172 270 aa8.97□□□□□ -0.97
SRP54YPR088C MMS4P38257 691 aa8.97□□□□□ -0.97
SRP54YPR088C AFG3P39925 761 aa8.97□□□□□ -0.97
SRP54YPR088C SAD1P43589 448 aa8.97□□□□□ -0.97
SRP54YPR088C TRP2P00899 507 aaKnown RBP8.96□□□□□ -0.98
SRP54YPR088C HXT1P32465 570 aa8.96□□□□□ -0.98
SRP54YPR088C TBF1Q02457 562 aa8.96□□□□□ -0.98
SRP54YPR088C YML082WQ04533 649 aaKnown RBP8.96□□□□□ -0.98
SRP54YPR088C RGA2Q06407 1009 aa8.96□□□□□ -0.98
SRP54YPR088C IWR1Q07532 353 aaPredicted RBP8.96□□□□□ -0.98
SRP54YPR088C SHS1Q07657 551 aa8.96□□□□□ -0.98
SRP54YPR088C GIS3Q12418 502 aa8.96□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms