RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	TOF1	P53840	1238 aa		5.77	□□□□□ -1.49
ULA1	YPL003W	ALF1	P53904	254 aa		5.77	□□□□□ -1.49
ULA1	YPL003W	SLD5	Q03406	294 aa		5.77	□□□□□ -1.49
ULA1	YPL003W	GIR2	Q03768	265 aa	Predicted RBP	5.77	□□□□□ -1.49
ULA1	YPL003W	VPS38	Q05919	439 aa		5.77	□□□□□ -1.49
ULA1	YPL003W	YPR109W	Q06104	294 aa		5.77	□□□□□ -1.49
ULA1	YPL003W	YDL057W	Q07379	328 aa		5.77	□□□□□ -1.49
ULA1	YPL003W	SMC5	Q08204	1093 aa		5.77	□□□□□ -1.49
ULA1	YPL003W	YPL216W	Q08964	1102 aa		5.77	□□□□□ -1.49
ULA1	YPL003W	RRP6	Q12149	733 aa	Known RBP	5.77	□□□□□ -1.49
ULA1	YPL003W	SWI6	P09959	803 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	SSB1	P11484	613 aa	Known RBP	5.76	□□□□□ -1.49
ULA1	YPL003W	NUD1	P32336	851 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	ASH1	P34233	588 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	RPC25	P35718	212 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	PGM2	P37012	569 aa	Known RBP	5.76	□□□□□ -1.49
ULA1	YPL003W	SHM1	P37292	490 aa	Predicted RBP	5.76	□□□□□ -1.49
ULA1	YPL003W	RTT107	P38850	1070 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	SMC2	P38989	1170 aa	Known RBP	5.76	□□□□□ -1.49
ULA1	YPL003W	YEL025C	P39991	1188 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	SSB2	P40150	613 aa	Known RBP	5.76	□□□□□ -1.49
ULA1	YPL003W	COS5	P47187	383 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	NBP1	P52919	319 aa	Predicted RBP	5.76	□□□□□ -1.49
ULA1	YPL003W	MDR1	P53258	950 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	UTP5	Q04177	643 aa	Known RBP	5.76	□□□□□ -1.49
ULA1	YPL003W	OPY2	Q06810	360 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	MSC6	Q08818	692 aa	Known RBP	5.76	□□□□□ -1.49
ULA1	YPL003W	APL4	Q12028	832 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	HMI1	Q12039	706 aa		5.76	□□□□□ -1.49
ULA1	YPL003W	CDC48	P25694	835 aa	Known RBP	5.75	□□□□□ -1.49
ULA1	YPL003W	TRK2	P28584	889 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	COT1	P32798	439 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	CAJ1	P39101	391 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	VFA1	P40080	203 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	OSW7	P43611	510 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	VPS53	P47061	822 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	ISM1	P48526	1002 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	HFM1	P51979	1187 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	YGL039W	P53183	348 aa	Known RBP	5.75	□□□□□ -1.49
ULA1	YPL003W	CAF130	P53280	1122 aa	Predicted RBP	5.75	□□□□□ -1.49
ULA1	YPL003W	DUS4	Q06063	367 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	RLP24	Q07915	199 aa	Known RBP	5.75	□□□□□ -1.49
ULA1	YPL003W	GYP1	Q08484	637 aa		5.75	□□□□□ -1.49
ULA1	YPL003W	NEW1	Q08972	1196 aa	Known RBP	5.75	□□□□□ -1.49
ULA1	YPL003W	NAM7	P30771	971 aa	Known RBP	5.74	□□□□□ -1.49
ULA1	YPL003W	RME1	P32338	300 aa	Known RBP	5.74	□□□□□ -1.49
ULA1	YPL003W	YSC83	P32792	385 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	TIM23	P32897	222 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	DBP7	P36120	742 aa	Known RBP	5.74	□□□□□ -1.49
ULA1	YPL003W	PCH2	P38126	564 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	UBP5	P39944	805 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	MXR1	P40029	184 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	CTR1	P49573	406 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	ATG1	P53104	897 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	HST2	P53686	357 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	ARK1	P53974	638 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	ROD1	Q02805	837 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	UME1	Q03010	460 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	NOC3	Q07896	663 aa	Predicted RBP	5.74	□□□□□ -1.49
ULA1	YPL003W	BUD20	Q08004	166 aa	Predicted RBP	5.74	□□□□□ -1.49
ULA1	YPL003W	CWC2	Q12046	339 aa	Predicted RBP	5.74	□□□□□ -1.49
ULA1	YPL003W	YLL058W	Q12198	575 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	TRM11	Q12463	433 aa		5.74	□□□□□ -1.49
ULA1	YPL003W	PPR1	P07272	904 aa	Predicted RBP	5.73	□□□□□ -1.49
ULA1	YPL003W	CHS2	P14180	963 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	SEC23	P15303	768 aa	Known RBP	5.73	□□□□□ -1.49
ULA1	YPL003W	SPO12	P17123	173 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	RRP43	P25359	394 aa	Predicted RBP	5.73	□□□□□ -1.49
ULA1	YPL003W	RGT1	P32862	1170 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	SMC1	P32908	1225 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	KTR2	P33550	425 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	MOT2	P34909	587 aa	Known RBP	5.73	□□□□□ -1.49
ULA1	YPL003W	FIG4	P42837	879 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	APT1	P49435	187 aa	Known RBP	5.73	□□□□□ -1.49
ULA1	YPL003W	ERG5	P54781	538 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	HOS3	Q02959	697 aa	Known RBP	5.73	□□□□□ -1.49
ULA1	YPL003W	VPS60	Q03390	229 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	YLR297W	Q05899	129 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	YPR078C	Q06813	372 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	FAL1	Q12099	399 aa	Known RBP	5.73	□□□□□ -1.49
ULA1	YPL003W	OSW2	Q12202	724 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	MMP1	Q12372	583 aa		5.73	□□□□□ -1.49
ULA1	YPL003W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
ULA1	YPL003W	DED1	P06634	604 aa	Known RBP	5.72	□□□□□ -1.49
ULA1	YPL003W	MTF2	P10849	440 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	PET123	P17558	318 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	PDC6	P26263	563 aa	Known RBP	5.72	□□□□□ -1.49
ULA1	YPL003W	NIP100	P33420	868 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	STO1	P34160	861 aa	Known RBP	5.72	□□□□□ -1.49
ULA1	YPL003W	YEL1	P34225	687 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	ATG3	P40344	310 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	SHQ1	P40486	507 aa	Predicted RBP	5.72	□□□□□ -1.49
ULA1	YPL003W	CEP3	P40969	608 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	LCB2	P40970	561 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	SHE10	P53075	577 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	DON1	Q05610	365 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	COQ9	Q05779	260 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	TSR1	Q07381	788 aa	Known RBP	5.72	□□□□□ -1.49
ULA1	YPL003W	GPI13	Q07830	1017 aa		5.72	□□□□□ -1.49
ULA1	YPL003W	MLH2	Q07980	695 aa		5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms