RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W UTP4Q06679 776 aaKnown RBP4.53□□□□□ -1.69
PUB1YNL016W CMR1Q12510 522 aaKnown RBP4.53□□□□□ -1.69
PUB1YNL016W YDR461C-AQ2V2P7 80 aa4.53□□□□□ -1.69
PUB1YNL016W VPS5Q92331 675 aa4.53□□□□□ -1.69
PUB1YNL016W YOL087CQ99247 1116 aa4.53□□□□□ -1.69
PUB1YNL016W UTP10P42945 1769 aaKnown RBP4.52□□□□□ -1.69
PUB1YNL016W PMD1P32634 1753 aa4.52□□□□□ -1.69
PUB1YNL016W LPD1P09624 499 aaKnown RBP4.52□□□□□ -1.69
PUB1YNL016W SEC23P15303 768 aaKnown RBP4.52□□□□□ -1.69
PUB1YNL016W BAP2P38084 609 aa4.52□□□□□ -1.69
PUB1YNL016W RKM3P38222 552 aa4.52□□□□□ -1.69
PUB1YNL016W ALR2P43553 858 aa4.52□□□□□ -1.69
PUB1YNL016W RSC8P43609 557 aaKnown RBP4.52□□□□□ -1.69
PUB1YNL016W TAF1P46677 1066 aa4.52□□□□□ -1.69
PUB1YNL016W ENT3P47160 408 aa4.52□□□□□ -1.69
PUB1YNL016W PBP1P53297 722 aaKnown RBP4.52□□□□□ -1.69
PUB1YNL016W PAP2P53632 584 aaKnown RBP4.52□□□□□ -1.69
PUB1YNL016W CTR9P89105 1077 aa4.52□□□□□ -1.69
PUB1YNL016W MLC2Q06580 163 aa4.52□□□□□ -1.69
PUB1YNL016W REH1Q06709 432 aa4.52□□□□□ -1.69
PUB1YNL016W IMP2'P32351 346 aa4.51□□□□□ -1.69
PUB1YNL016W YKU70P32807 602 aa4.51□□□□□ -1.69
PUB1YNL016W NIC96P34077 839 aa4.51□□□□□ -1.69
PUB1YNL016W RER2P35196 286 aa4.51□□□□□ -1.69
PUB1YNL016W TBS1P38114 1094 aa4.51□□□□□ -1.69
PUB1YNL016W APM2P38700 605 aa4.51□□□□□ -1.69
PUB1YNL016W RIM4P38741 713 aa4.51□□□□□ -1.69
PUB1YNL016W DYS1P38791 387 aa4.51□□□□□ -1.69
PUB1YNL016W NMD3P38861 518 aaKnown RBP4.51□□□□□ -1.69
PUB1YNL016W NDE1P40215 560 aa4.51□□□□□ -1.69
PUB1YNL016W ESL1P40456 1118 aa4.51□□□□□ -1.69
PUB1YNL016W NUT1P53114 1132 aa4.51□□□□□ -1.69
PUB1YNL016W MTQ2Q03920 221 aaPredicted RBP4.51□□□□□ -1.69
PUB1YNL016W SXM1Q04175 944 aaKnown RBP4.51□□□□□ -1.69
PUB1YNL016W TAP42Q04372 366 aa4.51□□□□□ -1.69
PUB1YNL016W TSR2Q06672 205 aaKnown RBP4.51□□□□□ -1.69
PUB1YNL016W HIM1Q06674 414 aa4.51□□□□□ -1.69
PUB1YNL016W IRC3Q06683 689 aa4.51□□□□□ -1.69
PUB1YNL016W VIP1Q06685 1146 aaKnown RBP4.51□□□□□ -1.69
PUB1YNL016W FAS2P19097 1887 aaKnown RBP4.5□□□□□ -1.69
PUB1YNL016W CAF20P12962 161 aaKnown RBP4.5□□□□□ -1.69
PUB1YNL016W APA1P16550 321 aaKnown RBP4.5□□□□□ -1.69
PUB1YNL016W DAL1P32375 460 aa4.5□□□□□ -1.69
PUB1YNL016W RVS167P39743 482 aaKnown RBP4.5□□□□□ -1.69
PUB1YNL016W FIR1P40020 876 aa4.5□□□□□ -1.69
PUB1YNL016W SAP185P40856 1058 aa4.5□□□□□ -1.69
PUB1YNL016W FET4P40988 552 aa4.5□□□□□ -1.69
PUB1YNL016W DUG1P43616 481 aaKnown RBP4.5□□□□□ -1.69
PUB1YNL016W UBA2P52488 636 aa4.5□□□□□ -1.69
PUB1YNL016W MON1P53129 644 aa4.5□□□□□ -1.69
PUB1YNL016W SIW14P53965 281 aa4.5□□□□□ -1.69
PUB1YNL016W RMT2Q03305 412 aa4.5□□□□□ -1.69
PUB1YNL016W YLR225CQ05948 407 aaKnown RBP4.5□□□□□ -1.69
PUB1YNL016W HDA2Q06629 674 aa4.5□□□□□ -1.69
PUB1YNL016W HBN1Q96VH4 193 aa4.5□□□□□ -1.69
PUB1YNL016W MLP1Q02455 1875 aaKnown RBP4.49□□□□□ -1.69
PUB1YNL016W DBF20P32328 564 aa4.49□□□□□ -1.69
PUB1YNL016W FBP26P32604 452 aa4.49□□□□□ -1.69
PUB1YNL016W SCT1P32784 759 aa4.49□□□□□ -1.69
PUB1YNL016W SER1P33330 395 aaKnown RBP4.49□□□□□ -1.69
PUB1YNL016W DUR3P33413 735 aa4.49□□□□□ -1.69
PUB1YNL016W CCC2P38995 1004 aa4.49□□□□□ -1.69
PUB1YNL016W MNT3P40549 630 aa4.49□□□□□ -1.69
PUB1YNL016W NIT2P47016 307 aa4.49□□□□□ -1.69
PUB1YNL016W RAT1Q02792 1006 aaKnown RBP4.49□□□□□ -1.69
PUB1YNL016W BUL2Q03758 920 aaKnown RBP4.49□□□□□ -1.69
PUB1YNL016W SPC19Q03954 165 aa4.49□□□□□ -1.69
PUB1YNL016W GRC3Q07845 632 aa4.49□□□□□ -1.69
PUB1YNL016W SSP2Q08646 371 aa4.49□□□□□ -1.69
PUB1YNL016W NEW1Q08972 1196 aaKnown RBP4.49□□□□□ -1.69
PUB1YNL016W WTM2Q12206 467 aa4.49□□□□□ -1.69
PUB1YNL016W MED1Q12321 566 aa4.49□□□□□ -1.69
PUB1YNL016W GRX6Q12438 231 aa4.49□□□□□ -1.69
PUB1YNL016W GPM1P00950 247 aaKnown RBP4.48□□□□□ -1.69
PUB1YNL016W RPP2BP02400 110 aaKnown RBP4.48□□□□□ -1.69
PUB1YNL016W DAT1P13483 248 aaKnown RBP4.48□□□□□ -1.69
PUB1YNL016W GSY1P23337 708 aa4.48□□□□□ -1.69
PUB1YNL016W KCC4P25389 1037 aa4.48□□□□□ -1.69
PUB1YNL016W HSP104P31539 908 aaKnown RBP4.48□□□□□ -1.69
PUB1YNL016W MCM10P32354 571 aa4.48□□□□□ -1.69
PUB1YNL016W HBS1P32769 611 aaKnown RBP4.48□□□□□ -1.69
PUB1YNL016W YHL041WP38730 149 aa4.48□□□□□ -1.69
PUB1YNL016W PEX28P38848 579 aa4.48□□□□□ -1.69
PUB1YNL016W DSS1P39112 969 aa4.48□□□□□ -1.69
PUB1YNL016W GPP2P40106 250 aaKnown RBP4.48□□□□□ -1.69
PUB1YNL016W QDR2P40474 542 aa4.48□□□□□ -1.69
PUB1YNL016W BNA1P47096 177 aa4.48□□□□□ -1.69
PUB1YNL016W DSD1P53095 428 aa4.48□□□□□ -1.69
PUB1YNL016W YGL140CP53120 1219 aa4.48□□□□□ -1.69
PUB1YNL016W SNP1Q00916 300 aaPredicted RBP4.48□□□□□ -1.69
PUB1YNL016W TIM50Q02776 476 aa4.48□□□□□ -1.69
PUB1YNL016W OPY2Q06810 360 aa4.48□□□□□ -1.69
PUB1YNL016W HSP82P02829 709 aaKnown RBP4.47□□□□□ -1.69
PUB1YNL016W INO1P11986 533 aa4.47□□□□□ -1.69
PUB1YNL016W STE6P12866 1290 aa4.47□□□□□ -1.69
PUB1YNL016W TOP3P13099 656 aa4.47□□□□□ -1.69
PUB1YNL016W AEP2P22136 580 aa4.47□□□□□ -1.69
PUB1YNL016W MSM1P22438 575 aa4.47□□□□□ -1.69
PUB1YNL016W VBA3P25594 458 aa4.47□□□□□ -1.69
PUB1YNL016W PIN4P34217 668 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms