RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W IES1P43579 692 aa10.88□□□□□ -0.67
SHH4YLR164W UBP3Q01477 912 aaKnown RBP RIP-Chip data10.88□□□□□ -0.67not detected
SHH4YLR164W YLR287CQ05881 355 aa10.88□□□□□ -0.67
SHH4YLR164W TMT1P32643 299 aa10.87□□□□□ -0.67
SHH4YLR164W KTR2P33550 425 aa10.87□□□□□ -0.67
SHH4YLR164W GUA1P38625 525 aaKnown RBP10.87□□□□□ -0.67
SHH4YLR164W FIG4P42837 879 aa10.87□□□□□ -0.67
SHH4YLR164W MNP1P53163 194 aaPredicted RBP10.87□□□□□ -0.67
SHH4YLR164W GIR2Q03768 265 aaPredicted RBP10.87□□□□□ -0.67
SHH4YLR164W UTP14Q04500 899 aaKnown RBP10.87□□□□□ -0.67
SHH4YLR164W RLP24Q07915 199 aaKnown RBP10.87□□□□□ -0.67
SHH4YLR164W MDM20Q12387 796 aaKnown RBP10.87□□□□□ -0.67
SHH4YLR164W ZPS1Q12512 249 aa10.87□□□□□ -0.67
SHH4YLR164W PDC6P26263 563 aaKnown RBP10.86□□□□□ -0.67
SHH4YLR164W GPT2P36148 743 aa10.86□□□□□ -0.67
SHH4YLR164W VID24P38263 362 aa10.86□□□□□ -0.67
SHH4YLR164W CCC2P38995 1004 aa10.86□□□□□ -0.67
SHH4YLR164W SHQ1P40486 507 aaPredicted RBP10.86□□□□□ -0.67
SHH4YLR164W ASN1P49089 572 aaKnown RBP10.86□□□□□ -0.67
SHH4YLR164W HSH155P49955 971 aaKnown RBP10.86□□□□□ -0.67
SHH4YLR164W CUL3P53202 744 aa10.86□□□□□ -0.67
SHH4YLR164W ERG5P54781 538 aa10.86□□□□□ -0.67
SHH4YLR164W DON1Q05610 365 aa10.86□□□□□ -0.67
SHH4YLR164W YLR297WQ05899 129 aa10.86□□□□□ -0.67
SHH4YLR164W MAM3Q12296 706 aa10.86□□□□□ -0.67
SHH4YLR164W COX4P04037 155 aa10.85□□□□□ -0.67
SHH4YLR164W IME1P21190 360 aa10.85□□□□□ -0.67
SHH4YLR164W EBP2P36049 427 aaKnown RBP10.85□□□□□ -0.67
SHH4YLR164W INP51P40559 946 aaKnown RBP10.85□□□□□ -0.67
SHH4YLR164W VPS72Q03388 795 aa10.85□□□□□ -0.67
SHH4YLR164W TRS130Q03660 1102 aa10.85□□□□□ -0.67
SHH4YLR164W CSR1Q06705 408 aaKnown RBP10.85□□□□□ -0.67
SHH4YLR164W OSW2Q12202 724 aa10.85□□□□□ -0.67
SHH4YLR164W YDL206WQ12424 762 aa10.85□□□□□ -0.67
SHH4YLR164W RTP1Q12751 981 aa10.85□□□□□ -0.67
SHH4YLR164W DPH2P32461 534 aa10.84□□□□□ -0.67
SHH4YLR164W VPS35P34110 944 aa10.84□□□□□ -0.67
SHH4YLR164W MMM1P41800 426 aa10.84□□□□□ -0.67
SHH4YLR164W VPS62P53285 467 aa10.84□□□□□ -0.67
SHH4YLR164W YCG1Q06680 1035 aa10.84□□□□□ -0.67
SHH4YLR164W RPL4AP10664 362 aaKnown RBP10.83□□□□□ -0.68
SHH4YLR164W PAH1P32567 862 aa10.83□□□□□ -0.68
SHH4YLR164W SMC1P32908 1225 aa10.83□□□□□ -0.68
SHH4YLR164W PIN4P34217 668 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
SHH4YLR164W NPP2P39997 493 aa10.83□□□□□ -0.68
SHH4YLR164W SEC9P40357 651 aa10.83□□□□□ -0.68
SHH4YLR164W AIM21P40563 679 aa10.83□□□□□ -0.68
SHH4YLR164W RPL4BP49626 362 aaKnown RBP10.83□□□□□ -0.68
SHH4YLR164W VPS38Q05919 439 aa10.83□□□□□ -0.68
SHH4YLR164W ECM7Q06200 448 aa10.83□□□□□ -0.68
SHH4YLR164W NEW1Q08972 1196 aaKnown RBP10.83□□□□□ -0.68
SHH4YLR164W YOL098CQ12496 1037 aa10.83□□□□□ -0.68
SHH4YLR164W TOM70P07213 617 aaKnown RBP10.82□□□□□ -0.68
SHH4YLR164W SWI6P09959 803 aa10.82□□□□□ -0.68
SHH4YLR164W SNA3P14359 133 aa10.82□□□□□ -0.68
SHH4YLR164W VMA1P17255 1071 aaKnown RBP10.82□□□□□ -0.68
SHH4YLR164W DUR3P33413 735 aa10.82□□□□□ -0.68
SHH4YLR164W NIP100P33420 868 aa10.82□□□□□ -0.68
SHH4YLR164W KIC1P38692 1080 aa10.82□□□□□ -0.68
SHH4YLR164W TVP23P38962 199 aa10.82□□□□□ -0.68
SHH4YLR164W CUS1Q02554 436 aaPredicted RBP10.82□□□□□ -0.68
SHH4YLR164W SHS1Q07657 551 aa10.82□□□□□ -0.68
SHH4YLR164W HIF1Q12373 385 aa10.82□□□□□ -0.68
SHH4YLR164W MTF2P10849 440 aa10.81□□□□□ -0.68
SHH4YLR164W WHI2P12611 486 aa10.81□□□□□ -0.68
SHH4YLR164W MSS51P32335 436 aa10.81□□□□□ -0.68
SHH4YLR164W SDS3P40505 327 aa10.81□□□□□ -0.68
SHH4YLR164W STU2P46675 888 aa10.81□□□□□ -0.68
SHH4YLR164W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68not detected
SHH4YLR164W JJJ3P47138 172 aa10.81□□□□□ -0.68
SHH4YLR164W AZR1P50080 613 aa10.81□□□□□ -0.68
SHH4YLR164W YML020WQ03722 664 aa10.81□□□□□ -0.68
SHH4YLR164W PLP2Q12017 286 aa10.81□□□□□ -0.68
SHH4YLR164W ADE4P04046 510 aaKnown RBP10.8□□□□□ -0.68
SHH4YLR164W CDC42P19073 191 aa10.8□□□□□ -0.68
SHH4YLR164W RAD57P25301 460 aa10.8□□□□□ -0.68
SHH4YLR164W SPC110P32380 944 aa10.8□□□□□ -0.68
SHH4YLR164W RAD54P32863 898 aa10.8□□□□□ -0.68
SHH4YLR164W STO1P34160 861 aaKnown RBP10.8□□□□□ -0.68
SHH4YLR164W UIP5P36137 443 aa10.8□□□□□ -0.68
SHH4YLR164W YAP5P40574 245 aa10.8□□□□□ -0.68
SHH4YLR164W ULI1P43604 169 aa10.8□□□□□ -0.68
SHH4YLR164W ALF1P53904 254 aa10.8□□□□□ -0.68
SHH4YLR164W TBF1Q02457 562 aa10.8□□□□□ -0.68
SHH4YLR164W MUK1Q02866 612 aa10.8□□□□□ -0.68
SHH4YLR164W PPM1Q04081 328 aa10.8□□□□□ -0.68
SHH4YLR164W YPR078CQ06813 372 aa10.8□□□□□ -0.68
SHH4YLR164W YLR001CQ07895 862 aa10.8□□□□□ -0.68
SHH4YLR164W SIL1Q08199 421 aa10.8□□□□□ -0.68
SHH4YLR164W HFI1Q12060 488 aa10.8□□□□□ -0.68
SHH4YLR164W TRP2P00899 507 aaKnown RBP10.79□□□□□ -0.68
SHH4YLR164W AFT1P22149 690 aa10.79□□□□□ -0.68
SHH4YLR164W PAM1P37304 830 aaKnown RBP10.79□□□□□ -0.68
SHH4YLR164W PTC4P38089 393 aa10.79□□□□□ -0.68
SHH4YLR164W SET5P38890 526 aaKnown RBP10.79□□□□□ -0.68
SHH4YLR164W ZAP1P47043 880 aa10.79□□□□□ -0.68
SHH4YLR164W CLA4P48562 842 aa10.79□□□□□ -0.68
SHH4YLR164W CEF1Q03654 590 aaPredicted RBP10.79□□□□□ -0.68
SHH4YLR164W RGA2Q06407 1009 aa10.79□□□□□ -0.68
SHH4YLR164W MOT1P32333 1867 aa10.78□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms